prot_H-elongata_contig20203.5716.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20203.5716.1
Unique Nameprot_H-elongata_contig20203.5716.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WXS3_9PHAE (Putative LOV domain-containing protein n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A126WXS3_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 1.150e-95
Identity = 134/166 (80.72%), Postives = 145/166 (87.35%), Query Frame = 0
Query:    1 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            MGA QSA     GTPFVP+K+LSVKDTI+VDMLSGPDHSK +SYCVTDPDL+DNPIIFCSD FA  +GY +EEVEGRNCRF QGAKTDP DVAKIR AV EKREACLCLLNYKKDGSTF+NQFF+TPLFD  G LAY+LGIQVQVKT   GQEP+NPGWVYTMGLH
Sbjct:    1 MGAEQSASTEPLGTPFVPRKLLSVKDTILVDMLSGPDHSKNISYCVTDPDLHDNPIIFCSDGFASFTGYDKEEVEGRNCRFLQGAKTDPGDVAKIRSAVSEKREACLCLLNYKKDGSTFNNQFFLTPLFDAEGTLAYFLGIQVQVKTGDKGQEPENPGWVYTMGLH 166          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A6H5L122_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L122_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 6.240e-95
Identity = 131/166 (78.92%), Postives = 146/166 (87.95%), Query Frame = 0
Query:    1 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            MG  QSA   S+GTPFVP K+LSVKDTI+VDM++GPD+S+ VSYCVTDPDL DNPIIFCSD FA+ +GY +EEVEGRNCRF QGAKTDP D AKIREA+KE +EACLCLLNYKKDGSTFHNQFF+TPLFD GG LAY+LGIQVQVKT   GQEP+NPGWVYTMGLH
Sbjct:    1 MGGAQSAE--SAGTPFVPNKILSVKDTILVDMMNGPDNSRVVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKEEVEGRNCRFLQGAKTDPGDTAKIREAIKENKEACLCLLNYKKDGSTFHNQFFLTPLFDEGGTLAYFLGIQVQVKTASDGQEPENPGWVYTMGLH 164          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126X2E3_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E3_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 8.480e-93
Identity = 129/166 (77.71%), Postives = 144/166 (86.75%), Query Frame = 0
Query:    1 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            MG  QSA P  SGTPF P K+LSVKDTI+VDM++GP++S+ VSYCVTDPDL DNPIIFCSD FA+ +GY ++EVEGRNCRF QGAKTDP D+ KIREAVKEK+EACLCLLNYKKDGS FHNQFF+TPLFD  G LAYYLGIQVQVKT   GQEP+NPGWVYTMGLH
Sbjct:    1 MGGAQSAEP--SGTPFKPAKLLSVKDTILVDMMNGPNNSRIVSYCVTDPDLEDNPIIFCSDGFAEFTGYAKDEVEGRNCRFLQGAKTDPGDITKIREAVKEKKEACLCLLNYKKDGSIFHNQFFLTPLFDAEGKLAYYLGIQVQVKTGADGQEPENPGWVYTMGLH 164          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 5.430e-92
Identity = 128/167 (76.65%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    1 MGALQSAPPV-SSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            MG  QSA    +SGTPF P K+LSVKDTI+VDM++GP++SK VSYCVTDPDL DNPIIFCSD FA  +GY +EEVEGRNCRF QGAKTDP DV KIREAV EK+EACLCLLNYKKDGSTFHNQFF+TP+FD  G LAY+LGIQVQVKT   GQEP NPGW+YTMGLH
Sbjct:    1 MGGAQSAETTPTSGTPFKPSKLLSVKDTILVDMMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQVQVKTAAPGQEPANPGWIYTMGLH 167          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WZ19_SARFS (Putative LOV domain-containing protein n=6 Tax=Sargassum TaxID=3015 RepID=A0A126WZ19_SARFS)

HSP 1 Score: 249 bits (636), Expect = 2.150e-82
Identity = 118/166 (71.08%), Postives = 139/166 (83.73%), Query Frame = 0
Query:    1 MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEP-KNPGWVYTMGL 165
            MGA QS+     GTPFVPKK LSVKD IIVDML+GPDHSKT+ YCV+DPDL DNPIIFCSD F++L GY REEVEGRNCRF QGAKTDP D+A+IR+A+KE +EACLCL+NYKKDGS F+NQF++ PLFD GG LAY+LGIQV+V+T    Q+P KN GW++TM L
Sbjct:    1 MGAEQSSSSDLLGTPFVPKKQLSVKDVIIVDMLNGPDHSKTLCYCVSDPDLGDNPIIFCSDGFSELVGYTREEVEGRNCRFLQGAKTDPGDIAEIRDAIKENKEACLCLINYKKDGSAFNNQFYLVPLFDAGGQLAYFLGIQVEVETLDDEQQPPKNLGWLHTMCL 166          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.640e-54
Identity = 85/158 (53.80%), Postives = 109/158 (68.99%), Query Frame = 0
Query:    9 PVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            P  S   FV KK LS +D  IVDML+   H + VS+C+ DPD  D PI+F SD F   +GY   E+EGRNCRF QG  T+ +DV KIR A+K ++E  + LLNYKKDG++F+N+FF++PL++  G LAYY+G+Q  VK  G GQ P NPGWVY  GLH
Sbjct:   59 PAPSQRQFVAKKELSERDATIVDMLNSAGH-EDVSFCLCDPDQEDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQCSVKKLGPGQAPANPGWVYAQGLH 215          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A7S4J4U8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4U8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.010e-52
Identity = 81/156 (51.92%), Postives = 107/156 (68.59%), Query Frame = 0
Query:   11 SSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            SS   F P+K L  +D  I+DML+   H ++V +CV DPDL D PIIF SD F   +GY  EE+EG+NCRF QG +T   DV +IR+A+KE++E C+ LLNY+KDGS+F N+FF++PL D    LAY++G+Q  V   G GQ P N GWVY+ G H
Sbjct:   25 SSARQFEPEKRLCERDYTIIDMLNSKGH-ESVCFCVCDPDLKDMPIIFSSDGFCDFTGYSHEEIEGKNCRFLQGTETSTEDVDRIRKAIKEQKEECVNLLNYRKDGSSFINEFFISPLLDDNEKLAYFIGVQCSVPKKGPGQMPSNAGWVYSQGNH 179          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A126WWA7_9STRA (Putative LOV domain-containing protein n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A126WWA7_9STRA)

HSP 1 Score: 173 bits (438), Expect = 7.600e-52
Identity = 80/151 (52.98%), Postives = 108/151 (71.52%), Query Frame = 0
Query:   16 FVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            F+ +K L  KD I+VDML G + +K V Y VTDPDL+DNPI+F S+ F + +GY + E+EGRNCRF QGA TDP D++ IR+A++++ +  +C+ NY K+G  F NQFFM PL D    LAY+LG+QV V     GQ+ +NPGW+YTMG H
Sbjct:   50 FISQKKLCPKDQIVVDML-GMNENKNVCYLVTDPDLDDNPIVFTSEGFCKYTGYEKNEIEGRNCRFLQGAGTDPKDISLIRDAIRKEIDVNVCIQNYCKNGKPFMNQFFMCPLRDENKKLAYFLGVQVVVPKKAPGQQQENPGWIYTMGNH 199          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A7S2I3C2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I3C2_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.760e-51
Identity = 85/163 (52.15%), Postives = 112/163 (68.71%), Query Frame = 0
Query:    4 LQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            +QS PP      F P+K +S +D+IIVDML+ P H + VS+CV DPDL D PII+ S AF   +GY   E+EG+NCRF QG +T+ SDV +IR A+K +    + LLNYKKDG+ F N+FF++PL D    L Y++G+QV+V   G GQ P NPGWVYT+G H
Sbjct:   24 MQSPPPRQ----FQPEKQISERDSIIVDMLNSPGH-EDVSFCVCDPDLADCPIIYVSSAFCTFTGYDHTEIEGKNCRFLQGPETEKSDVDRIRAAIKSEVATNVNLLNYKKDGTKFINEFFISPLRDENQKLLYFIGVQVEVPKQGPGQAPSNPGWVYTVGNH 181          
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.300e-51
Identity = 83/160 (51.88%), Postives = 109/160 (68.12%), Query Frame = 0
Query:    8 PPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPDLNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVKEKREACLCLLNYKKDGSTFHNQFFMTPLFDGG-GDLAYYLGIQVQVKTPGAGQEPKNPGWVYTMGLH 166
            P V++   F P K L  KD I+VDML+  D    + + VTDPDL DNPI+F S+ F++ +GY + E+EGRNCRF QG +T+P+DV  IR A+  + +A +CLLNY+KDG+ F NQFF+ PL D   G +AYYLG+Q  V+    GQ  KN GWVY MGLH
Sbjct:   18 PLVTASGDFEPSKELKPKDMILVDMLNSRDEPD-ICWVVTDPDLEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQAAVRQKEGGQTQKNAGWVYQMGLH 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20203.5716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126WXS3_9PHAE1.150e-9580.72Putative LOV domain-containing protein n=1 Tax=Des... [more]
A0A6H5L122_9PHAE6.240e-9578.92PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A126X2E3_9PHAE8.480e-9377.71Putative LOV domain-containing protein n=2 Tax=Scy... [more]
A0A126WVC6_9PHAE5.430e-9276.65Putative LOV domain-containing protein n=2 Tax=Ect... [more]
A0A126WZ19_SARFS2.150e-8271.08Putative LOV domain-containing protein n=6 Tax=Sar... [more]
A0A6U0JAP0_9STRA1.640e-5453.80Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S4J4U8_9STRA1.010e-5251.92Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A126WWA7_9STRA7.600e-5252.98Putative LOV domain-containing protein n=1 Tax=Syn... [more]
A0A7S2I3C2_9STRA1.760e-5152.15Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A835ZDN1_9STRA4.300e-5151.88PAS domain-containing protein n=1 Tax=Tribonema mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20coord: 43..156
e-value: 6.4E-39
score: 135.3
NoneNo IPR availablePANTHERPTHR47429FAMILY NOT NAMEDcoord: 42..150
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 54..141
e-value: 1.9E-8
score: 32.5
IPR000014PAS domainPFAMPF13426PAS_9coord: 44..143
e-value: 8.4E-19
score: 67.8
IPR000014PAS domainPROSITEPS50112PAScoord: 53..101
score: 9.073
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 44..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20203contigH-elongata_contig20203:1663..4937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20203.5716.1mRNA_H-elongata_contig20203.5716.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20203 1615..5443 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20203.5716.1 ID=prot_H-elongata_contig20203.5716.1|Name=mRNA_H-elongata_contig20203.5716.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
MGALQSAPPVSSGTPFVPKKMLSVKDTIIVDMLSGPDHSKTVSYCVTDPD
LNDNPIIFCSDAFAQLSGYLREEVEGRNCRFFQGAKTDPSDVAKIREAVK
EKREACLCLLNYKKDGSTFHNQFFMTPLFDGGGDLAYYLGIQVQVKTPGA
GQEPKNPGWVYTMGLHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf