mRNA_H-elongata_contig201855.5708.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: D7FZA4_ECTSI (Adenylyl-sulfate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZA4_ECTSI) HSP 1 Score: 163 bits (413), Expect = 4.000e-49 Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVLV 258
RW LKGQRGVVLWLTGLSGSGKST+ANA+DVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDR+ENVRRV EVARLMVDLGIIVLV
Sbjct: 29 RWELKGQRGVVLWLTGLSGSGKSTVANALDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRRENVRRVAEVARLMVDLGIIVLV 114
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A3M1VBW0_9BACT (Adenylyl-sulfate kinase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1VBW0_9BACT) HSP 1 Score: 130 bits (328), Expect = 2.140e-36 Identity = 62/83 (74.70%), Postives = 69/83 (83.13%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGII 249
R LKG RGVVLW TGLSG GKSTIAN VD KL A G+HTY+LDGDN+RHGLN LGFSPEDRKEN+RR+GEVA+L D G+I
Sbjct: 21 RCRLKGHRGVVLWFTGLSGCGKSTIANTVDHKLHAMGKHTYVLDGDNIRHGLNKNLGFSPEDRKENIRRIGEVAKLFCDAGLI 103
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A836VT28_9PLAN (Adenylyl-sulfate kinase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836VT28_9PLAN) HSP 1 Score: 126 bits (316), Expect = 1.010e-34 Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVL 255
RW L G RG VLW TGLS SGKSTIAN VD KL A G+HT++LDGDN+RHGLN LGFS EDR+EN+RR+GEVA+L D GI+ L
Sbjct: 21 RWQLMGHRGAVLWFTGLSASGKSTIANTVDHKLHAMGKHTFVLDGDNIRHGLNKNLGFSAEDREENIRRIGEVAKLFCDAGILTL 105
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: UPI001FF5B05D (adenylyl-sulfate kinase n=1 Tax=Alcanivorax sp. CY1518 TaxID=2933565 RepID=UPI001FF5B05D) HSP 1 Score: 125 bits (314), Expect = 2.440e-34 Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVL 255
R LKGQRG +WLTGLSGSGKSTIANA++V L GRHTY+LDGDNVRHGLN LG S +DR EN+RRVGE++RLMVD G+IV+
Sbjct: 28 RARLKGQRGCCIWLTGLSGSGKSTIANALEVALHQAGRHTYLLDGDNVRHGLNKDLGMSDDDRTENIRRVGELSRLMVDAGLIVI 112
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A0B4XQK0_9GAMM (Adenylyl-sulfate kinase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XQK0_9GAMM) HSP 1 Score: 125 bits (313), Expect = 3.640e-34 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 10 LKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVL 255
LKGQRG LWLTGLSGSGKST+ANA++V L +GRHTY+LDGDNVRHGLN LG S DR EN+RRVGE++RLMVD G+IV+
Sbjct: 31 LKGQRGCCLWLTGLSGSGKSTLANALEVALFEQGRHTYLLDGDNVRHGLNKDLGMSDADRTENIRRVGELSRLMVDAGLIVI 112
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A257J477_9PROT (Multifunctional fusion protein n=1 Tax=Alphaproteobacteria bacterium PA2 TaxID=2015570 RepID=A0A257J477_9PROT) HSP 1 Score: 132 bits (331), Expect = 4.680e-34 Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVLV 258
R ALKGQRG V+WLTGLSGSGKSTIAN V+ KL AEGRHTY+LDGDNVRHGLN LGF+ DR EN+RRV EVA+LMVD G+IVLV
Sbjct: 452 RGALKGQRGRVVWLTGLSGSGKSTIANLVEKKLHAEGRHTYLLDGDNVRHGLNRDLGFTDADRVENIRRVAEVAKLMVDAGLIVLV 537
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A227JLW6_9CAUL (Multifunctional fusion protein n=1 Tax=Phenylobacterium zucineum TaxID=284016 RepID=A0A227JLW6_9CAUL) HSP 1 Score: 132 bits (331), Expect = 4.680e-34 Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVLV 258
R ALKGQRG V+WLTGLSGSGKSTIAN V+ KL AEGRHTY+LDGDNVRHGLN LGF+ DR EN+RRV EVA+LMVD G+IVLV
Sbjct: 452 RGALKGQRGRVVWLTGLSGSGKSTIANLVEKKLHAEGRHTYLLDGDNVRHGLNRDLGFTDADRVENIRRVAEVAKLMVDAGLIVLV 537
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: UPI001F3BC515 (adenylyl-sulfate kinase n=1 Tax=Pseudoalteromonas sp. SMS1 TaxID=2908894 RepID=UPI001F3BC515) HSP 1 Score: 123 bits (309), Expect = 1.120e-33 Identity = 62/82 (75.61%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 7 ALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIV 252
ALKG R VVLW TGLSGSGKSTIANAV+ KL G HTY+LDGDNVRHGLN GL FS EDR EN+RR+ EVA+L VD GIIV
Sbjct: 20 ALKGHRSVVLWYTGLSGSGKSTIANAVEAKLFELGCHTYLLDGDNVRHGLNKGLSFSDEDRVENIRRISEVAKLFVDAGIIV 101
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A517Z6Q1_9PLAN (Adenylyl-sulfate kinase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z6Q1_9PLAN) HSP 1 Score: 123 bits (309), Expect = 1.150e-33 Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVL 255
R LKG +G VLW TGLSG+GKSTIAN VD KL A G+HTY+LDGDN+RHGLN LGFS EDR EN+RR+GEVA+L D G+I L
Sbjct: 21 RKRLKGHKGCVLWFTGLSGAGKSTIANTVDHKLHALGKHTYLLDGDNIRHGLNKNLGFSAEDRAENIRRIGEVAKLFADCGVITL 105
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Match: A0A0Q8MYK2_9CAUL (Multifunctional fusion protein n=6 Tax=Phenylobacterium TaxID=20 RepID=A0A0Q8MYK2_9CAUL) HSP 1 Score: 130 bits (328), Expect = 1.220e-33 Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 1
Query: 1 RWALKGQRGVVLWLTGLSGSGKSTIANAVDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRKENVRRVGEVARLMVDLGIIVLV 258
R ALKGQRG V+WLTGLSGSGKSTIAN V+ +L A+GRHTY+LDGDNVRHGLN LGF+ EDR EN+RRV EV++LMVD G+IVLV
Sbjct: 452 RAALKGQRGRVVWLTGLSGSGKSTIANLVEKRLHADGRHTYLLDGDNVRHGLNKDLGFTDEDRVENIRRVAEVSKLMVDAGLIVLV 537 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig201855.5708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig201855.5708.1 >prot_H-elongata_contig201855.5708.1 ID=prot_H-elongata_contig201855.5708.1|Name=mRNA_H-elongata_contig201855.5708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp MAHGAQRVRKEHNRKCCRRKAHRRGAPHVHLRWRQRPSRPQQRPRVLPRRback to top mRNA from alignment at H-elongata_contig201855:2..836- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig201855.5708.1 ID=mRNA_H-elongata_contig201855.5708.1|Name=mRNA_H-elongata_contig201855.5708.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=835bp|location=Sequence derived from alignment at H-elongata_contig201855:2..836- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig201855:2..836- >mRNA_H-elongata_contig201855.5708.1 ID=mRNA_H-elongata_contig201855.5708.1|Name=mRNA_H-elongata_contig201855.5708.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig201855:2..836- (Himanthalia elongata Himel1 dioecious)back to top |