mRNA_H-elongata_contig20151.5684.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20151.5684.1
Unique NamemRNA_H-elongata_contig20151.5684.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: D8LRR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRR4_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 3.580e-72
Identity = 125/180 (69.44%), Postives = 146/180 (81.11%), Query Frame = 1 
Query:    1 QGASRLHASPMDKFMSGLEKMMNGDPEEAAGES--FVQAPGDAKDLDDFRSSLIKQTRAAS--KKKDFSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTLAGYFDDSYF 528
            Q   +L ASPM+KFMSGLEKMM G   E + ++    +   + +D+  FR SLI+Q+R  S  KK++F+GYDMYDLIVDKFDVPYDVQINKTV+ GKPVLCFN+MWK+LGQSSF LSEQEYLEHLQALAELL EWDRVDQFK +LA+T+KRP  YFGYAVALPLDL PDT+  YFDDSYF
Sbjct:   43 QSVGKLSASPMEKFMSGLEKMMTGPQLEGSMDTPQEQEQQEEPQDMSAFRESLIRQSRKDSLKKKEEFTGYDMYDLIVDKFDVPYDVQINKTVWMGKPVLCFNIMWKHLGQSSFPLSEQEYLEHLQALAELLMEWDRVDQFKRSLADTKKRPQSYFGYAVALPLDLDPDTMVDYFDDSYF 222
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: A0A835ZDV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.360e-41
Identity = 74/129 (57.36%), Postives = 94/129 (72.87%), Query Frame = 1 
Query:  139 FRSSLIKQTRAASKKKDFSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTLAGYFDDSY 525
            FR++L KQ +    +  F GY + DLIVDK+  P D+QI K VFAGKP+L  NVMWKYLGQ SFHL+E+EYLEHL+A+A+LL +WDRVD   + +   RKRP  YFGYAV+LPLDL PD+L   F + +
Sbjct:    4 FRATLNKQIKTTQDEDKFDGYKLCDLIVDKWGAPLDIQIKKEVFAGKPLLYLNVMWKYLGQQSFHLNEREYLEHLEAIAQLLHKWDRVDHVIDLIKTCRKRPQAYFGYAVSLPLDLDPDSLLPIFPEEF 132
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: L1IPD9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IPD9_GUITC)

HSP 1 Score: 151 bits (381), Expect = 5.970e-38
Identity = 82/166 (49.40%), Postives = 107/166 (64.46%), Query Frame = 1 
Query:    7 ASRLHASPMDKFMSGLEKMMNGDPEEAAGESFVQAPGDAKDLDDFRSSLIKQTRAA-SKKKDFSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTL 501
            A R   SPM    S      N D ++A+  ++     D + ++ FRS + +  +   S+ K+F GY   DLIV+K+ VPYDVQI +  F GKP++ FNVMWK+ GQ SF L+E EYLEHLQ LAEL  +WDRVD  K  +A+ RKRPN YFGYAVALPLDLP + +
Sbjct:   39 ARRCKVSPM---YSSYRMSANNDADDASANAY-----DEESIEAFRSLMQQSWKGKKSESKEFDGYAFRDLIVEKWGVPYDVQIKREYFLGKPMIFFNVMWKWCGQQSFPLTETEYLEHLQFLAELCVKWDRVDLLKEEIAKCRKRPNGYFGYAVALPLDLPQEVM 196
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: A0A7S0XWG0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWG0_HEMAN)

HSP 1 Score: 139 bits (350), Expect = 3.190e-33
Identity = 73/130 (56.15%), Postives = 89/130 (68.46%), Query Frame = 1 
Query:  127 DLDDFRSSLIKQ---TRAASKKKD--FSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTL 501
            D+D FRS L  Q      A  + D    GY + DLIV K+ VPYDVQI + VF GKP+L  NVMWK+ GQ SFHL+EQEYLEHLQ +AELL +W+RVD  K  +A+ +KRP  YFGYAV + LDLP D +
Sbjct:   99 DMDAFRSMLSDQWNKEEVAVVEDDGLLDGYKLRDLIVAKWGVPYDVQIQRGVFLGKPLLFLNVMWKHYGQQSFHLTEQEYLEHLQFIAELLNKWERVDHVKKLIADCKKRPAGYFGYAVPIALDLPADIM 228
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: A0A7S0YUK4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YUK4_9CRYP)

HSP 1 Score: 137 bits (346), Expect = 3.820e-33
Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 1 
Query:  103 VQAPGDAK-DLDDFRSSLIKQ---TRAASKKKD--FSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTL 501
            + A GD + D+D FRS L  Q      A  + D    GY + DLIV K+ VPYDVQI + VF GKP+L  NVMWKY GQ SFHL+EQEYLEHLQ +AEL+ +W+RV+  K  + + +KRP  YFGYAV + LDLP D +
Sbjct:   67 MSAGGDDEVDMDAFRSMLSDQWNKEEVAVAEDDGLLDGYKLRDLIVAKWGVPYDVQIQRGVFLGKPLLFLNVMWKYYGQQSFHLTEQEYLEHLQFIAELINKWERVEHVKKVIDDCQKRPAGYFGYAVPIALDLPADVM 205
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: W7TIL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIL0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.610e-26
Identity = 55/140 (39.29%), Postives = 87/140 (62.14%), Query Frame = 1 
Query:  103 VQAPGDAKDLDDFRSSLIKQTRAASKKKDFSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTLAGYFDDS 522
            V  P  +  + ++R  +++         +  GY ++D+IV K+ VPY V++ +  FAGK +L  NVMWKYLGQ SF L+E++YLEHL+ ++  L +W +V  FK  LAE RK+PN YFGYAV+  + +    +  + +D+
Sbjct:   50 VITPDGSPSMQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLAECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDA 189
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: A0A4D9CNG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNG2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.600e-26
Identity = 52/131 (39.69%), Postives = 83/131 (63.36%), Query Frame = 1 
Query:  130 LDDFRSSLIKQTRAASKKKDFSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTLAGYFDDS 522
            + ++R  +++         +  GY ++D+IV K+ VPY V++ +  FAGK +L  NVMWKYLGQ SF L+E++YLEHL+ ++  L +W +V  FK  L E RK+PN YFGYAV+  + +    +  + +D+
Sbjct:    1 MQEYRKKVLQDLVERKNIGELDGYQLFDMIVAKWGVPYGVELRRMDFAGKKLLYINVMWKYLGQQSFPLNERQYLEHLEYISRKLVQWGKVADFKKDLTECRKKPNAYFGYAVSFNVPVSEAEIDQFVEDA 131
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: A0A7S3ED46_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED46_9RHOD)

HSP 1 Score: 96.3 bits (238), Expect = 3.460e-19
Identity = 51/139 (36.69%), Postives = 88/139 (63.31%), Query Frame = 1 
Query:  100 FVQAPGDAKDLDDFRSSLIKQ-TRAASKKKDFSGYDMYDLIVDKFDVPYDVQINKTV-FAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTLAGY 510
            F ++P D  +++  R  L  Q +R   + K+F GY + DL+++K+   YD+Q+  T  F GK ++  N+MWKY  Q SF L E++YL HL+A+++ L++W+ V+ F   + ETR++P    G A+A+P+D+ P+ L  +
Sbjct:   31 FPRSPDD--EVEAARLRLTDQFSREEKQDKEFDGYKLRDLLLEKYGRCYDIQLKATPWFNGKSLITVNIMWKYFEQQSFPLEEEDYLCHLEAISQYLKKWNSVEYFIKYVRETREKPR--VGKALAVPIDVSPEMLRDF 165
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: A0A0F6U1J0_MICAE (Uncharacterized protein n=69 Tax=Chroococcales TaxID=1118 RepID=A0A0F6U1J0_MICAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.730e-16
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:  193 SGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDL 486
            +G D+  L+++K+   YD+Q+ +     K  +   VMWKYL Q+SF LSE EYLEHL A+A  L EW  V QF+  + ETR+RP    G AV+LPLDL
Sbjct:    2 TGVDLQQLLLEKWGRSYDIQLRRI----KDKVHVQVMWKYLEQASFPLSESEYLEHLNAIANYLHEWGGVSQFQAFIRETRERPR--LGKAVSLPLDL 93
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BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Match: UPI0019E2E224 (DUF3067 family protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019E2E224)

HSP 1 Score: 84.0 bits (206), Expect = 1.120e-15
Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 1 
Query:  196 GYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSFHLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPLDLPPDTLAGYFDDS 522
            G +++ +I+DK+   YD+Q+ +     K  +   VMWKYL Q+SF LSEQEY+EHL+A+A  L  W   +Q +  +  TR RP    G AV++PLDL   T     DD+
Sbjct:    3 GKELHQIILDKWGCSYDIQLRRI----KGRIFVQVMWKYLEQASFPLSEQEYMEHLEAVATYLNAWGSAEQVQTFIRRTRHRPR--LGKAVSIPLDLGDRTSEWILDDN 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20151.5684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR4_ECTSI3.580e-7269.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDV8_9STRA1.360e-4157.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1IPD9_GUITC5.970e-3849.40Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0XWG0_HEMAN3.190e-3356.15Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0YUK4_9CRYP3.820e-3353.24Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
W7TIL0_9STRA1.610e-2639.29Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CNG2_9STRA3.600e-2639.69Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3ED46_9RHOD3.460e-1936.69Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A0F6U1J0_MICAE1.730e-1647.96Uncharacterized protein n=69 Tax=Chroococcales Tax... [more]
UPI0019E2E2241.120e-1541.28DUF3067 family protein n=1 Tax=Pleurocapsales cyan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20151contigH-elongata_contig20151:1021..5184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score241.1
Seed ortholog evalue3.7e-61
Seed eggNOG ortholog2880.D8LRR4
EggNOG free text desc.Domain of unknown function (DUF3067)
EggNOG OGs2AH3C@1,2S9WY@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF3067
Ec32 orthologEc-08_002130.1
Exons4
Model size3105
Cds size501
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20151.5684.1prot_H-elongata_contig20151.5684.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20151 1051..2610 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930133.4253314-UTR-H-elongata_contig20151:1020..10501622930133.4253314-UTR-H-elongata_contig20151:1020..1050Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20151 1021..1050 +
1691679293.5790699-UTR-H-elongata_contig20151:1020..10501691679293.5790699-UTR-H-elongata_contig20151:1020..1050Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20151 1021..1050 +
1622930133.5099978-UTR-H-elongata_contig20151:2610..51841622930133.5099978-UTR-H-elongata_contig20151:2610..5184Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20151 2611..5184 +
1691679293.635135-UTR-H-elongata_contig20151:2610..51841691679293.635135-UTR-H-elongata_contig20151:2610..5184Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20151 2611..5184 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930133.4397547-CDS-H-elongata_contig20151:1050..11871622930133.4397547-CDS-H-elongata_contig20151:1050..1187Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 1051..1187 +
1691679293.590439-CDS-H-elongata_contig20151:1050..11871691679293.590439-CDS-H-elongata_contig20151:1050..1187Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 1051..1187 +
1622930133.4604788-CDS-H-elongata_contig20151:1625..17661622930133.4604788-CDS-H-elongata_contig20151:1625..1766Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 1626..1766 +
1691679293.6047928-CDS-H-elongata_contig20151:1625..17661691679293.6047928-CDS-H-elongata_contig20151:1625..1766Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 1626..1766 +
1622930133.4781654-CDS-H-elongata_contig20151:2062..21521622930133.4781654-CDS-H-elongata_contig20151:2062..2152Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 2063..2152 +
1691679293.6170702-CDS-H-elongata_contig20151:2062..21521691679293.6170702-CDS-H-elongata_contig20151:2062..2152Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 2063..2152 +
1622930133.4938-CDS-H-elongata_contig20151:2477..26101622930133.4938-CDS-H-elongata_contig20151:2477..2610Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 2478..2610 +
1691679293.625877-CDS-H-elongata_contig20151:2477..26101691679293.625877-CDS-H-elongata_contig20151:2477..2610Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20151 2478..2610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20151.5684.1

>prot_H-elongata_contig20151.5684.1 ID=prot_H-elongata_contig20151.5684.1|Name=mRNA_H-elongata_contig20151.5684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
MDKFMSGLEKMMNGDPEEAAGESFVQAPGDAKDLDDFRSSLIKQTRAASK
KKDFSGYDMYDLIVDKFDVPYDVQINKTVFAGKPVLCFNVMWKYLGQSSF
HLSEQEYLEHLQALAELLEEWDRVDQFKNALAETRKRPNPYFGYAVALPL
DLPPDTLAGYFDDSYF*
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mRNA from alignment at H-elongata_contig20151:1021..5184+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20151.5684.1 ID=mRNA_H-elongata_contig20151.5684.1|Name=mRNA_H-elongata_contig20151.5684.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4164bp|location=Sequence derived from alignment at H-elongata_contig20151:1021..5184+ (Himanthalia elongata Himel1 dioecious)
CAGGGTGCTTCACGGTTGCATGCGAGCCCCATGGACAAATTCATGAGCGG
ATTAGAGAAGATGATGAACGGAGATCCTGAAGAGGCTGCTGGCGAGAGCT
TCGTGCAGGCGCCGGGAGACGCTAAGGACTTGGATGACTTCCGCAGCAGC
TTGATCAAACAGACAAGGTGATGAATTACACGCTACTCCTCGACTGTTCC
CGAAAGGGTCTCGGTCAGCGTCCTCGATCACGTTGATATCGATGCGCTAA
GGCGTCTGAAATGGGCAAATGCCCTTTTACGCAGCGGACTCCCTTTCTTT
TTGGATCTAGAATCGCTAGTTTTTTTTTATGTGATTGCTTTTGATATTTC
TTTTTTGCTACAGCAAGAGGTGCGTGCCGTATCCAGTTTGTCCACGGGGA
CAGGGGAAGATTATTTTCCCTGTTCAGCTGACCACGAGCAGAAGGCAACC
ATATCCGGCTCTTCCTTCTGCTAAAAGTGCGACCAACAACAACAACAACA
ACGGTGTCCTAACGGTGCCAACGACGCCTCACCCTTACGTTGTGACCACC
ATGATATATTATGACCACCCATCGGGAAAATTGCTGATGATGACTCATGA
TCCAGGGCGGCCAGCAAAAAGAAAGATTTCAGCGGCTACGATATGTACGA
CCTGATTGTGGACAAGTTCGATGTGCCGTACGACGTGCAGATCAACAAGA
CCGTCTTCGCGGGGAAGCCTGTCTTATGTTTCAACGTAATGTGGAAGTGA
GTCAATCTTCTTTTAGGGCCGAACCCCCTGGCGGCTTTTGTAGCAGCTTA
CCTGATTCTTCCTTTGTAGCACTACTATCATATGCACCAAGTAATTTGTT
CGTTTGTAGGCTTGTTGCGTTGAGGAAAATTCTTGTAACGGGCTTAAATG
CTACAGTATACCGCCGCTAGTTGGTATTATATTAATAGTATGGTTTCCTG
GATGCAAAGCCTTTCAGCCGATGACCACGAGTGGCTCTTGATATTTCGTG
ACGCTCGTGAAGATGTATCACCCTCGCAAGCAAACGATACAGGTACCTCG
GGCAGAGCAGCTTCCACCTGAGCGAACAGGAATACTTGGAACATCTCCAG
GCACTTGCAGAGCTCCTAGAGGAATGGGACAGGTGAAAGACTCCGCCTCC
TTGTGGTTCTTGGTCCCTGTTTGAGAGAGGGTGGCTGTTTGGGGCTGTTT
GGCGTTGGATACTGTACTCTACAGGTAGTGTTTAATGCGTTGATGCCCCA
ATCTCCTCGTTTGAAAACTGTGTATACGTTTGGCATATCTGCCCCCCAGT
TAGAAATATGTGGCAATATCGGGAATACCTTTTTATTTTGCATCTATCGC
GTAAACTAGAGGTTGCACCAATCGCTGAATTTGCTCCGAATCGAATATCT
GGGACCTTTTCAACTGTGAGCCACTTCGATAAATCCACGTCCGTCCATAT
CTACCAGGGTGGACCAATTCAAAAATGCGCTGGCGGAAACCAGAAAACGG
CCAAACCCATACTTCGGCTATGCTGTGGCGCTTCCGCTTGATCTCCCGCC
GGACACTTTGGCAGGCTACTTTGATGACTCTTATTTTTGAATAGTCTTGA
CACTATAGGTACTGTAAGGGTGTGACCGTACACGGCGAGGGGGGGCTCGT
GAGGTCGAGAGCCTTTCCATCCTAACACATGCCGTCGTTTTGAAACGTGT
CACACCTCGTTCAGATATGCTATTCTACAGTTAGTACACTATTAAATAAC
ACTATTAAATATCATGTATATTACATGAGAGGAGAGGAGATGATGTTGAT
GCTGCGTGAATTGTTTAATATTATAGAATGGTTATTGGATTATGTTCGGG
CCTAGAATGGTATTGGTATTGTTGGTGTTGTTTGCATCCGATTTCAGTCA
TCCCTATTCTGCAACGTCTCGGATATGTGTACATATTTCAGTACTTGGAT
TCCAGTATTTGGAGTGCAGTGAGATGGTGACATCTCTGTGTGGCGGTTTA
CTGGGTGGTTAGGTGTGAAGGGATGGTGATCTCCACGCTATCTAAATACT
CTAAGCTGGAGTACCATATGCAGCATGGACGTACAAGGCTCGTTGGACGG
CATCTACGGTATGATAGTCATGCAGGAACGATACGATCAAGCTGGTTTAA
CTGACTTTTCTTGAGTGGAGATACTAGACCCTCGATTTTAGCTAAACACC
AGGGAGATGTCTGGTGGAGTAAGGGAGGGGCTATACGATACAGTACACCA
CAAACACCACCCGGTAGGAGAAAAAATTGTGTTGGATGACGCGGGGGCGT
GTCTTTGGAACGCTAGCGTTATCGGTATCGGTGGTGTCATGAACACGCTG
TACAGAGGATAAAAAACAAAATCAGTATCCCCACTCAGCAATGCACAAAA
ACGGTTACATACATGGAATCAAAAGTATAAACGCGGTACAATGTCTGCAC
CAATTCGAAGCCTCCATCCGGCAACTGTATGCACCGCGCGCAGCGCGTGC
GGATAAGACTGGAGATATTAGTTCAAGTCGACATATCGGTGACCCTCAAG
ATGCATGCGTATCGAGGTACATCAGAGGGCTCGTCGGGTAAAGGCTTTAT
TCTTGGGCATACCGTGTGTCGCTCTAATTTGTCGTGCGTCACACTAGCGC
TGCTTTGCCCTAGCGGTTATACCTCAAGGTGAGGACGCTAGTGTGTCTCG
AAGGGGAAGAGCGAGTCGGACACAGGACTGGAATGTGAGACCTCGTGCAA
TACAACGGGGATTCATATTCCGGCCCACTTCGCGGGTGTGGTGCGGATGT
GGATCAAAGAGATCCTCAAATTCCTTGATGTCCACACGAGTCGGGAATTG
CACCGCATTCGGGAGGCGTATGTTATGAGGATTGGCCTGAAATCCCTCCG
CTTTAGGCGACGACCTAGGAATAGAAGCCGTTTTTATCGAGTCCATCTCT
ATTCTGGATTCTCTTACTGTAGATGGCAGTCTTTTTAAAGAACTGTTGAG
CTCCCACATCGCATGAGACGTGGCAAAAAGACATACTCAACCCTCATGCC
CACTCTTCCCATAGTGGGTGTGAGAAAATAGAGGCGTACATTACTTGGTC
CATGGGGTTACTTGAATAGGCTGCACCCGTTACTTGAGGACTAATGGCTC
GGTGCCGGCGGACTCTCGGTAGTAAACGCCATCGGTACGCAATTGCGTGA
CCTGATGAAATCGGGATTGGCCCGATAGCGGTTGACGGTAGAGATGGACG
CCGTCGCGGAAAACGAGGGAATTGAGAGGATCCCGGGAGTAAGAATCAGA
TTCAGCCTGTGTTGAGAGAATGAACAGGCTGGACTGCTGAACGCGTCTCG
CGAGACCAAATTCTCTGGCGCAAACGGGGACAGTGAAAATTATTTTTCCT
GGTCAGCTGACCACGAGCAGAAGGAAACCAAATCCGGTTGATCCTTCTGC
TAAATGTGCGATATACATATATACATACATACAGGAGTCAATCTTATTCT
GCTCGTGCTTTTGTCGAGCAAGTTAATGAAAGAAAAACAAGGATTATAGG
GAACCCGTTTGTCATGAGCATCTGCCACTGGAGACCTCGGAACCTACTGT
GAGTTATCACACATGTTTCTATGACCTTAACTTTGGTCCTCTTCAAACTG
GCGTCGAAGATGTTGATCCGTCTCTGGCTTGTTTTTATGCATCTGGACTA
GCATAGTACTCCTTTGTTCTTTTTGACGGCCTCGACCACCCTCATTCTCT
TTTCCTCGGTTTTCTCAGGCATGTCGTCTGACAACTGCTGTGGTGTTCTT
AGCGGTTGGTGCGCTCGGGGTTGCGGGGCGGGTGGTGTGGCTGGCTTTTC
GATTGCGGTGTGCGGGCCTCAGCCACACGTGCGGCGGAAGGTGCAGCGGG
AGTCGCAGCAATAGATTCTGCTACGCGGGCCTCAGTAGCACGTGCGAAGA
CTCCCACAGCGACTGCTATGGGACTCTGCACAGAAAATTTGCTGTACGGG
CCTCAGCAGTATGTGTGGTGTCATACACGGCTGCTGAGGGAGTTCCATCG
CCCTCCTCTGTGGCGGGTGGTCGCCCTTGTGCAAAAACAAATGGCGTAAT
TAAGCTTGGTGCCGCTGCTGGAGTGTGACTCACTGCAGGTTGAGCAGGGG
TGCTTTCAGAGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig20151:1021..5184+

>mRNA_H-elongata_contig20151.5684.1 ID=mRNA_H-elongata_contig20151.5684.1|Name=mRNA_H-elongata_contig20151.5684.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig20151:1021..5184+ (Himanthalia elongata Himel1 dioecious)
ATGGACAAATTCATGAGCGGATTAGAGAAGATGATGAACGGAGATCCTGA
AGAGGCTGCTGGCGAGAGCTTCGTGCAGGCGCCGGGAGACGCTAAGGACT
TGGATGACTTCCGCAGCAGCTTGATCAAACAGACAAGATGGACAAATTCA
TGAGCGGATTAGAGAAGATGATGAACGGAGATCCTGAAGAGGCTGCTGGC
GAGAGCTTCGTGCAGGCGCCGGGAGACGCTAAGGACTTGGATGACTTCCG
CAGCAGCTTGATCAAACAGACAAGGGCGGCCAGCAAAAAGAAAGATTTCA
GCGGCTACGATATGTACGACCTGATTGTGGACAAGTTCGATGTGCCGTAC
GACGTGCAGATCAACAAGACCGTCTTCGCGGGGAAGCCTGTCTTATGTTT
CAACGTAATGTGGAAGGCGGCCAGCAAAAAGAAAGATTTCAGCGGCTACG
ATATGTACGACCTGATTGTGGACAAGTTCGATGTGCCGTACGACGTGCAG
ATCAACAAGACCGTCTTCGCGGGGAAGCCTGTCTTATGTTTCAACGTAAT
GTGGAAGTACCTCGGGCAGAGCAGCTTCCACCTGAGCGAACAGGAATACT
TGGAACATCTCCAGGCACTTGCAGAGCTCCTAGAGGAATGGGACAGGTAC
CTCGGGCAGAGCAGCTTCCACCTGAGCGAACAGGAATACTTGGAACATCT
CCAGGCACTTGCAGAGCTCCTAGAGGAATGGGACAGGGTGGACCAATTCA
AAAATGCGCTGGCGGAAACCAGAAAACGGCCAAACCCATACTTCGGCTAT
GCTGTGGCGCTTCCGCTTGATCTCCCGCCGGACACTTTGGCAGGCTACTT
TGATGACTCTTATTTTTGAGGTGGACCAATTCAAAAATGCGCTGGCGGAA
ACCAGAAAACGGCCAAACCCATACTTCGGCTATGCTGTGGCGCTTCCGCT
TGATCTCCCGCCGGACACTTTGGCAGGCTACTTTGATGACTCTTATTTTT
GA
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