mRNA_H-elongata_contig201253.5672.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 244 bits (624), Expect = 2.020e-75 Identity = 125/186 (67.20%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLYGGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTFVEATAGSASS 558
W +QH MMVRLL+LKKAI+EYFR +E+NNRKL++REWTVTNEVCSLLDVV EVT+KIQG DTHISQTMFNMREI+ IF+ + + RVPDQ Y +V KE++ ++DL E VR+ +LSR++KK LG A M LERIC LLDPRRK CS EHL+NGS L A+AI DVK VAKTF EA GSASS
Sbjct: 122 WASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASS 307
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.140e-72 Identity = 125/186 (67.20%), Postives = 148/186 (79.57%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLYGGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTFVEATAGSASS 558
W +QH MMVRLL+LKKAI+EYFR +E+NNRKL++REWTVTNEVCSLLDVV EVT+KIQG DTHISQTMFNMREI+ IF+ + + RVPDQ Y +V KE++ ++DL E VR+ +LSR++KK LG A M LERIC LLDPRRK CS EHL+NGS L A+AI DVK VAKTF EA GSASS
Sbjct: 450 WASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTFAEADLGSASS 635
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.760e-34 Identity = 75/179 (41.90%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLY---GGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTF 528
WT+Q MM R+L LKK I EYF+++ N RKLT EWT+TNEVCSLL V+EVTI++QG+VDTH+ Q MF + E+ + E+ R P+ + + + DL+ EA V + + ++ +KG+G A + +ER+ L+DPRRK + L NGS L A +D+K V F
Sbjct: 460 WTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKF 638
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 138 bits (348), Expect = 3.720e-34 Identity = 80/176 (45.45%), Postives = 104/176 (59.09%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLYGGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTF 528
WT+Q MM RLL LKK I EYFR N+RKLT EWT+TNEVCSLL V+EVTI++QG DTHISQ MF + E+ + E+ R + + E M + +LS A V + +L +++K +GKA +ER+ L+DPRRK L NGS L A ED+K V F
Sbjct: 458 WTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNA------TEPEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQF 627
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.530e-33 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLY---GGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTF 528
WT+Q MM R L LKK I E+F+++ N+RKLT EWT+ NEVCSLL V+E+TI++QG+VDTHI Q MF + E+ + E+ R P+ + + + DL+ EA V + +L + KKG+G A + ER+ L+DPRRK + L NGS L A +D+K V F
Sbjct: 110 WTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKF 288
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 134 bits (338), Expect = 5.580e-33 Identity = 73/179 (40.78%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLY---GGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTF 528
WT+Q MM R+L LKK I EYF+++ N RKLT EWT+TNEVCSLL V+EVTI++QG+VDTH+ Q MF + E+ + E+ R P+ + + + DL+ EA V + + ++ +KG+G A + +ER+ L+DPR + + L NGS L A +D+K V F
Sbjct: 265 WTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKF 443
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.390e-32 Identity = 87/210 (41.43%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNN-------RKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLY-------------GGGN-------VQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTFVEATAGS 549
WT+Q MM RLL LKK I EYFRR N RKLTA EWTVTNEVCSLL+ V+EVTI++QG DTH+SQ F + E+ + + RV + G G + + DL++EA DV +L +D+KG+GKA +ER+ LLDPRRK HL NGS L A D+K F + +A S
Sbjct: 267 WTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAPS 476
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE) HSP 1 Score: 126 bits (316), Expect = 8.870e-32 Identity = 73/179 (40.78%), Postives = 103/179 (57.54%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLY---GGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTF 528
WT+Q MM R L LKK I EYF+++ N RKLT EWT+ NEVCSLL V+EVTI++QG+VDTHI Q MF + E+ + E+ R P+ + + + DL+ EA V + +L + +KG+G A + +E + L+DP K + L NGS L A +D+K V F
Sbjct: 49 WTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIRQPNATVVPVPPEGIPTDGTQVTDLTAEAQCVLEVLLDVMREKGVGSAQVAVESLSALMDPSGKLLDSDQLENGSADLRNKAEDDLKAVIAKF 227
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 129 bits (325), Expect = 3.330e-31 Identity = 82/190 (43.16%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 1 WTTQHDMMVRLLQLKKAIMEYFRRHESNN-------RKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLYGGGNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTFVEATAGS 549
WT+Q MM RLL LKK I EYFRR N RKLTA EWTVTNEVCSLL+ V+EVTI++QG +TH+SQ F + E + + + S + E + L++EA DV + +D+KG+GKA +ER+ LLDPRRK HL NGS L A D+K F + +A S
Sbjct: 267 WTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINEGEG---QNESSL---------DGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAPS 444
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.120e-30 Identity = 82/200 (41.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 4 TTQHDMMVRLLQLKKAIMEYFRR------HESNNRKLTAREWTVTNEVCSLLDVVTEVTIKIQGTVDTHISQTMFNMREIKAIFAEEDFSFRVPDQLYGG-------------------GNVQKERMALEDLSMEAVDVRDTILSRLDKKGLGKANMTLERICTLLDPRRKKCSKEHLINGSPALHAAAIEDVKMVAKTF 528
T+Q MM RLL LKK I EYFRR ++ RKL++ EW VTNEVCSLL V+E+TI+IQG DTHISQ MF + E+ + +E R + + G V E + +EDL+ EA VR +L +++KG+GKA +ER+ LLDPRRK + NG L AA D+K TF
Sbjct: 123 TSQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATF 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig201253.5672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig201253.5672.1 >prot_H-elongata_contig201253.5672.1 ID=prot_H-elongata_contig201253.5672.1|Name=mRNA_H-elongata_contig201253.5672.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp MMVRLLQLKKAIMEYFRRHESNNRKLTAREWTVTNEVCSLLDVVTEVTIKback to top mRNA from alignment at H-elongata_contig201253:30..665+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig201253.5672.1 ID=mRNA_H-elongata_contig201253.5672.1|Name=mRNA_H-elongata_contig201253.5672.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=636bp|location=Sequence derived from alignment at H-elongata_contig201253:30..665+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig201253:30..665+ >mRNA_H-elongata_contig201253.5672.1 ID=mRNA_H-elongata_contig201253.5672.1|Name=mRNA_H-elongata_contig201253.5672.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig201253:30..665+ (Himanthalia elongata Himel1 dioecious)back to top |