prot_H-elongata_contig19969.5617.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19969.5617.1
Unique Nameprot_H-elongata_contig19969.5617.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.180e-60
Identity = 93/117 (79.49%), Postives = 105/117 (89.74%), Query Frame = 0
Query:   19 LRARDVGFSTRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            LR  ++  S+  V  + ++GRKG+SGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE ELKRVF+T+HN YVN LRNPFSPLAKP+DSAKFRL+VDRQIN+YNS
Sbjct:   33 LRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 8.060e-31
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 0
Query:   51 DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+SEL  +  TIH  YVN   NPFSPL +PI S +F+LAVDRQ+N YN+
Sbjct:   69 DMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSELAALLHTIHGFYVNYQLNPFSPLNQPIGSERFKLAVDRQVNGYNA 153          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.060e-25
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 0
Query:   49 STDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYN 134
            + DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE++LK VF  +H LYV+ L++PFSPL   I S +F   V+RQ+  YN
Sbjct:   66 TNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSVFQGLHILYVSYLQSPFSPLTGKITSERFSKGVERQVVVYN 151          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A0G4ISZ6_PLABS (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISZ6_PLABS)

HSP 1 Score: 92.4 bits (228), Expect = 3.800e-21
Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   40 KGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            + S G +    D +LG+LCPIDEY+VYGYMT + +K + V++DV  +R+S++K +F  +HNLYV+ L NPF+   KPI S +F   VD+ I  + +
Sbjct:   52 QSSRGVSPAPFDKYLGYLCPIDEYKVYGYMTVSDIKFIVVVQDVF-VRDSDMKGLFRWLHNLYVDTLMNPFAEPGKPITSRRFCGEVDKVIGSHEN 146          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A8K1FMJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ4_PYTOL)

HSP 1 Score: 91.7 bits (226), Expect = 4.640e-21
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   23 DVGFS-TRTVWLDV-ELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            D+GF     V LD+ E   +G+S  A    DM+LG L PI++YRVYGY+T+T +KL+A+LED + +RESEL+  F+ +H LYVN + NPF+P+ + I S +F   V   + ++NS
Sbjct:   25 DLGFHYIAHVALDIIEEKVRGASNIA-AKDDMYLGFLGPIEDYRVYGYVTNTSVKLVAILED-SPVRESELRSFFSELHKLYVNAVSNPFAPIGERITSQQFDKKVYNLVLQHNS 137          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 91.3 bits (225), Expect = 6.730e-21
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0
Query:   23 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            D+GF     V LD+   +  S+G      DM+LG L PI++YRVYGY+T+T +K +A+++D + +RESEL+  FA +H +YVN + NPF+P+ + I S  F   V   + ++N+
Sbjct:   25 DLGFHYIAHVSLDIIEEKLRSAGIMAAKDDMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELRSFFAEMHKMYVNAMSNPFAPIGERITSQNFEKKVYNLVLQHNT 137          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 90.5 bits (223), Expect = 1.350e-20
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 0
Query:   23 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            D+GF     V LDV   +   +G      DM+LG L PI++YRVYGY+T+T +K + VL+D   +RESEL+  FA +H LYVN + NPF+PL + + S  F   V   + ++N+
Sbjct:   26 DLGFHYIAHVSLDVIEEKLRGAGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLVVQHNT 138          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A3F2S4U6_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4U6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.310e-19
Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 0
Query:   23 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            D+GF     V LDV   +   +G +    DM+LG L P+++YRVYGY+T+T +K + VL+D   +RESEL+  FA +H LYVN + NPF+P+ + + S  F   V   + ++N+
Sbjct:   92 DLGFHYIAHVSLDVIEEKLRGAGISSSKDDMYLGFLGPVEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPIGERLTSQTFDKRVSNLVVQHNT 204          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A7S1YTA1_TRICV (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YTA1_TRICV)

HSP 1 Score: 88.2 bits (217), Expect = 3.460e-19
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   38 GRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVND----IRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 135
            G +  +  A  S  M++G LCPI++ RVYGY+T+T +K +AV+ED  +    +RESELK +FA++H+LYV    NPFS L   I S +F   V + ++ YNS
Sbjct:   75 GNRWRTPGATGSNAMWVGLLCPIEDVRVYGYLTNTSIKFMAVIEDGGNSRQPLRESELKSLFASLHDLYVEYTLNPFSQLRGKISSKRFDDDVGKYVDSYNS 176          
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: H3G5D0_PHYRM (Trafficking protein particle complex subunit 2-like protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3G5D0_PHYRM)

HSP 1 Score: 84.7 bits (208), Expect = 1.560e-18
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   23 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQI 130
            D+GF     V LDV   +   +       DM+LG L PI++YRVYGY+T+T +K + VL+D   +RESEL+  FA +H LYVN + NPF+PL + + S  F   V   +
Sbjct:   16 DLGFHYIAHVSLDVIEEKLRGASVTTSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLV 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI3.180e-6079.49Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA8.060e-3163.53Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA4.060e-2554.65Trafficking protein particle complex subunit 2-lik... [more]
A0A0G4ISZ6_PLABS3.800e-2144.79Trafficking protein particle complex subunit 2-lik... [more]
A0A8K1FMJ4_PYTOL4.640e-2145.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WRF7_GLOUD6.730e-2140.35Trafficking protein particle complex subunit 2-lik... [more]
D0N1W2_PHYIT1.350e-2042.11Trafficking protein particle complex subunit 2-lik... [more]
A0A3F2S4U6_9STRA1.310e-1940.35Trafficking protein particle complex subunit 2-lik... [more]
A0A7S1YTA1_TRICV3.460e-1944.12Trafficking protein particle complex subunit 2-lik... [more]
H3G5D0_PHYRM1.560e-1842.20Trafficking protein particle complex subunit 2-lik... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 49..128
e-value: 5.9E-15
score: 55.5
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403MBP-1 INTERACTING PROTEIN-2Acoord: 45..133
NoneNo IPR availableGENE3D3.30.450.70coord: 28..134
e-value: 6.6E-20
score: 72.8
NoneNo IPR availablePANTHERPTHR12403:SF11TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2-LIKE PROTEINcoord: 45..133
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 49..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19969contigH-elongata_contig19969:4459..6559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19969.5617.1mRNA_H-elongata_contig19969.5617.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19969 3312..6659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19969.5617.1 ID=prot_H-elongata_contig19969.5617.1|Name=mRNA_H-elongata_contig19969.5617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MWLAKEKVSLAVQTTQPLLRARDVGFSTRTVWLDVELGRKGSSGAADVST
DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHN
LYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR011012Longin-like_dom_sf