mRNA_H-elongata_contig19969.5617.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19969.5617.1
Unique NamemRNA_H-elongata_contig19969.5617.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.940e-54
Identity = 93/117 (79.49%), Postives = 105/117 (89.74%), Query Frame = 2 
Query:  155 LRARDVGFSTRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            LR  ++  S+  V  + ++GRKG+SGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE ELKRVF+T+HN YVN LRNPFSPLAKP+DSAKFRL+VDRQIN+YNS
Sbjct:   33 LRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.080e-26
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 2 
Query:  251 DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+SEL  +  TIH  YVN   NPFSPL +PI S +F+LAVDRQ+N YN+
Sbjct:   69 DMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSELAALLHTIHGFYVNYQLNPFSPLNQPIGSERFKLAVDRQVNGYNA 153
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.850e-21
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 2 
Query:  245 STDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYN 502
            + DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE++LK VF  +H LYV+ L++PFSPL   I S +F   V+RQ+  YN
Sbjct:   66 TNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSVFQGLHILYVSYLQSPFSPLTGKITSERFSKGVERQVVVYN 151
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A0G4ISZ6_PLABS (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISZ6_PLABS)

HSP 1 Score: 91.3 bits (225), Expect = 6.360e-18
Identity = 43/96 (44.79%), Postives = 65/96 (67.71%), Query Frame = 2 
Query:  218 KGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            + S G +    D +LG+LCPIDEY+VYGYMT + +K + V++DV  +R+S++K +F  +HNLYV+ L NPF+   KPI S +F   VD+ I  + +
Sbjct:   52 QSSRGVSPAPFDKYLGYLCPIDEYKVYGYMTVSDIKFIVVVQDVF-VRDSDMKGLFRWLHNLYVDTLMNPFAEPGKPITSRRFCGEVDKVIGSHEN 146
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A8K1FMJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ4_PYTOL)

HSP 1 Score: 90.5 bits (223), Expect = 7.160e-18
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2 
Query:  167 DVGFS-TRTVWLDV-ELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            D+GF     V LD+ E   +G+S  A    DM+LG L PI++YRVYGY+T+T +KL+A+LED + +RESEL+  F+ +H LYVN + NPF+P+ + I S +F   V   + ++NS
Sbjct:   25 DLGFHYIAHVALDIIEEKVRGASNIA-AKDDMYLGFLGPIEDYRVYGYVTNTSVKLVAILED-SPVRESELRSFFSELHKLYVNAVSNPFAPIGERITSQQFDKKVYNLVLQHNS 137
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 90.1 bits (222), Expect = 1.000e-17
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 2 
Query:  167 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            D+GF     V LD+   +  S+G      DM+LG L PI++YRVYGY+T+T +K +A+++D + +RESEL+  FA +H +YVN + NPF+P+ + I S  F   V   + ++N+
Sbjct:   25 DLGFHYIAHVSLDIIEEKLRSAGIMAAKDDMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELRSFFAEMHKMYVNAMSNPFAPIGERITSQNFEKKVYNLVLQHNT 137
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 89.4 bits (220), Expect = 1.870e-17
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 2 
Query:  167 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            D+GF     V LDV   +   +G      DM+LG L PI++YRVYGY+T+T +K + VL+D   +RESEL+  FA +H LYVN + NPF+PL + + S  F   V   + ++N+
Sbjct:   26 DLGFHYIAHVSLDVIEEKLRGAGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLVVQHNT 138
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A7S1YTA1_TRICV (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YTA1_TRICV)

HSP 1 Score: 88.6 bits (218), Expect = 1.170e-16
Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 2 
Query:  212 GRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVND----IRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS*TLCVGK 526
            G +  +  A  S  M++G LCPI++ RVYGY+T+T +K +AV+ED  +    +RESELK +FA++H+LYV    NPFS L   I S +F   V + ++ YNS    VG+
Sbjct:   75 GNRWRTPGATGSNAMWVGLLCPIEDVRVYGYLTNTSIKFMAVIEDGGNSRQPLRESELKSLFASLHDLYVEYTLNPFSQLRGKISSKRFDDDVGKYVDSYNSKVAKVGE 183
[Close]
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: A0A3F2S4U6_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4U6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.770e-16
Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:  167 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS 505
            D+GF     V LDV   +   +G +    DM+LG L P+++YRVYGY+T+T +K + VL+D   +RESEL+  FA +H LYVN + NPF+P+ + + S  F   V   + ++N+
Sbjct:   92 DLGFHYIAHVSLDVIEEKLRGAGISSSKDDMYLGFLGPVEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPIGERLTSQTFDKRVSNLVVQHNT 204
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BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Match: H3G5D0_PHYRM (Trafficking protein particle complex subunit 2-like protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3G5D0_PHYRM)

HSP 1 Score: 84.0 bits (206), Expect = 9.230e-16
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 2 
Query:  167 DVGFS-TRTVWLDVELGRKGSSGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHNLYVNNLRNPFSPLAKPIDSAKF 466
            D+GF     V LDV   +   +       DM+LG L PI++YRVYGY+T+T +K + VL+D   +RESEL+  FA +H LYVN + NPF+PL + + S  F
Sbjct:   16 DLGFHYIAHVSLDVIEEKLRGASVTTSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTF 115
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19969.5617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI1.940e-5479.49Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA1.080e-2663.53Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA1.850e-2154.65Trafficking protein particle complex subunit 2-lik... [more]
A0A0G4ISZ6_PLABS6.360e-1844.79Trafficking protein particle complex subunit 2-lik... [more]
A0A8K1FMJ4_PYTOL7.160e-1845.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WRF7_GLOUD1.000e-1740.35Trafficking protein particle complex subunit 2-lik... [more]
D0N1W2_PHYIT1.870e-1742.11Trafficking protein particle complex subunit 2-lik... [more]
A0A7S1YTA1_TRICV1.170e-1643.12Trafficking protein particle complex subunit 2-lik... [more]
A0A3F2S4U6_9STRA1.770e-1640.35Trafficking protein particle complex subunit 2-lik... [more]
H3G5D0_PHYRM9.230e-1644.55Trafficking protein particle complex subunit 2-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19969contigH-elongata_contig19969:3312..6659 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score190.7
Seed ortholog evalue4.6e-46
Seed eggNOG ortholog2880.D8LEU3
Preferred nameTRAPPC2L
KEGG koko:K13354,ko:K17622,ko:K20301
KEGG TC2.A.29.20.1
KEGG Pathwayko04146,map04146
GOsGO:0003008,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007600,GO:0008150,GO:0009987,GO:0012505,GO:0016043,GO:0016050,GO:0016192,GO:0017016,GO:0017112,GO:0017137,GO:0019233,GO:0019899,GO:0022607,GO:0030008,GO:0031267,GO:0032501,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0050877,GO:0051020,GO:0051179,GO:0051234,GO:0051259,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0090114,GO:0098772,GO:0099023
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsKOG3444@1,KOG3444@2759
EC3.1.3.48
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko02000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSedlin
Ec32 orthologEc-21_005600.1
Exons3
Model size1655
Cds size408
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19969.5617.1prot_H-elongata_contig19969.5617.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19969 4459..6559 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930125.908581-UTR-H-elongata_contig19969:3311..44581622930125.908581-UTR-H-elongata_contig19969:3311..4458Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19969 3312..4458 -
1691679290.8902218-UTR-H-elongata_contig19969:3311..44581691679290.8902218-UTR-H-elongata_contig19969:3311..4458Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19969 3312..4458 -
1622930125.9665513-UTR-H-elongata_contig19969:6559..66591622930125.9665513-UTR-H-elongata_contig19969:6559..6659Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19969 6560..6659 -
1691679290.9310353-UTR-H-elongata_contig19969:6559..66591691679290.9310353-UTR-H-elongata_contig19969:6559..6659Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19969 6560..6659 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930125.924469-CDS-H-elongata_contig19969:4458..45871622930125.924469-CDS-H-elongata_contig19969:4458..4587Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19969 4459..4587 -
1691679290.902031-CDS-H-elongata_contig19969:4458..45871691679290.902031-CDS-H-elongata_contig19969:4458..4587Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19969 4459..4587 -
1622930125.9398127-CDS-H-elongata_contig19969:5462..57201622930125.9398127-CDS-H-elongata_contig19969:5462..5720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19969 5463..5720 -
1691679290.9097507-CDS-H-elongata_contig19969:5462..57201691679290.9097507-CDS-H-elongata_contig19969:5462..5720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19969 5463..5720 -
1622930125.9517255-CDS-H-elongata_contig19969:6538..65591622930125.9517255-CDS-H-elongata_contig19969:6538..6559Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19969 6539..6559 -
1691679290.9189382-CDS-H-elongata_contig19969:6538..65591691679290.9189382-CDS-H-elongata_contig19969:6538..6559Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19969 6539..6559 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19969.5617.1

>prot_H-elongata_contig19969.5617.1 ID=prot_H-elongata_contig19969.5617.1|Name=mRNA_H-elongata_contig19969.5617.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MWLAKEKVSLAVQTTQPLLRARDVGFSTRTVWLDVELGRKGSSGAADVST
DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRESELKRVFATIHN
LYVNNLRNPFSPLAKPIDSAKFRLAVDRQINEYNS*
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mRNA from alignment at H-elongata_contig19969:3312..6659-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19969.5617.1 ID=mRNA_H-elongata_contig19969.5617.1|Name=mRNA_H-elongata_contig19969.5617.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3348bp|location=Sequence derived from alignment at H-elongata_contig19969:3312..6659- (Himanthalia elongata Himel1 dioecious)
CAGAATGAGCCCTTGTTCTTGCGGACTTATACGGATGCGGAAGGGGAGGA
AGAGGATGATGCCAACCTCCGCCTACACAACGTAGTTCACAGCTCTCTCG
ATGTGGTTGGCGAAAGAAAAGGTGCTACCAAAATGTTAGTTTATATATGT
CTGCCCCCGAGTAGACGAATCGACGGTATATCGAGCATGTCAAAAGACGC
CGAGTGATTCTACAAACAGCACCTAGATCATCTATATCGAGGGGTGATAA
AGAACTAGGTATCATAGCCATCACATATGGTGACAAGAAAAGGATCAACC
GAATGTGGTTGCCTCCTGCTTGTGATCAGCTGAACAGGGAAAATGATTTT
CCTCCCTTTCCCCGTTTGCACCTGAGAATTTGGTCTCACGAGACGCGTTC
TGCAGTCCCGCCTCGCGTCAGCCCGCTCAATCTCTCAACCCAGGCTGAAT
CTGGTGGGTATTCCCGGGATTCTCTCGATCCTCTCGTTTCCCGCGGTGGC
GTCCATCTCTATCATCAACCGCCATCGGGCCAATCCCGATTTCATCAGGT
CACGCAATTGCGTACCGATGGCGTTTACTACCGAGAGTTAAAATAAACTG
ATTATAGCAAGTACCTAATTTAGAGTTTGGGTGTGCGTTGTTCTGGCTCT
CACTTGTATGACGTGCATATCATTGCGGGGAGATTACAGTGCCTTAATTT
TATTCATTATCCAGAACTCTCGAGTCTTATATGAAATCAAACTGAAAGAA
ACACATTACTCGTACCATCGTACGGATACTGCGCGGTTAAATTTTCAATT
TTTCCACCCCTGTAGTTGTTGTTGTTGTTGGTCTCACTTTTAGCAGAGTA
AGATCAACCGGATTTGGTTGCCTTCTGTTCGTGGCCAGCTGAACAGATAA
AATATTGATTTTGATAATTTTTTGAAATTGATCGATCAGGTATCTCTTGC
TGTTCAGACGACTCAGCCCCTGCTTCGTGCTCGTGATGTCGGCTTCTCCA
CCCGCACGGTTTGGCTCGATGTTGAGCTAGGCAGGAAAGGGTCATCCGGA
GCGGCGGACGTGTCGACAGACATGTTTCTGGGGCATCTGTGCCCCATCGA
TGAATACCGAGTATACGGCTACATGACTAGCACGCGGCTGAAACTCTTAG
CGGTGTTGGAAGATGTGAATGACATTCGGGAGTCGGAGCTGAAGAGGGTG
AGTATATTCAATACTGCCTTAGAACTGCTTATAGTCTTGTTAATAGTATA
CTCGTGTAAAAAAACATGAAACAGAACGAAACAAAGCTGGTACTTGTACA
GTAGGCGATTTCGTATTACGATCGGTGGATTGATTGACTTGCAGGATGAT
GCACGACCAGCTGAAGAGATCCCCTTTTTTGGAGAGGTGTGATGATGTTT
GCTTTAAGGTGCCCCCCTCCCCCCACCCCCAAACCCCCGATTTAGCGGCA
TACTGTACACGCTCACAACCGCAGCAGTCGTGTAGAAGAATTTCCAACGA
AAGGTGGGTGTCATGAATCAGGTGTATTAAGTAACACACGGTAGCACGCT
TGAACCAGAGAGAGAGAGATGAGGTAATCGCTTCAGATCCCAAGCGAGAT
AGGAAGTGTTACCGTGGGTGGCATTGATAACCTAGTCGGTTCAATTGTAT
AAAATGTACACAGCTAGCTCATCGACAGAAAGTGGAACGAGCGTAATCGT
CGAAAAGAAAGGGGGAGGGGGGGGGGGGTGAGGTTAACATAACATTGTTC
ACAGCCATTGATAATCTACGGTGTCTTGAAGCCATGTCATGTGAGACTAG
TAATGATTTGCTGGCGTGCTCCTCTTTCAAAGGGCGTTGAAGCCAGGGTG
TGTTCTGATCGATGGTTTTGTGCTCGATTCAGTATCGAGTTCGTGTGGAG
ATATGCGATAGACGCTCCGCTCCACAACGAGGGCTGCTGGCTTTGGCTAT
TTGCGGCCGTGGTGATTCACACCATAGCTTGAGGTGGTTTCAACACGCGC
GCAGCCGATGCCTCCGCCCCCCCCCCCATCTCCCCCTCACACTTCGGAAT
CGCTGTTTTTGTTCGTGGACAGGTATTTGCGACTATCCACAACCTCTACG
TGAACAACCTTCGAAATCCGTTTTCTCCTCTAGCGAAGCCGATTGACTCC
GCCAAGTTCCGTCTGGCAGTTGATCGACAAATCAACGAATACAATTCGTG
AACACTCTGTGTTGGAAAAATGGAGCCGTCTAATGTGCAGACATATTTAT
ATTTATACATGGATTCCCATGAAGCGGAAGGAGCGCGTTGTAGGTATTGG
TTGAATGTTGCCATCGAAGAGTCCTGATGGGGATGAGTGCCGTCTGCTGC
CCTTGTTCCGCCACTTTGGGAGGGCATATGACGGCGTTAAGAACAGCTCT
GATTCTTTTTGTCGCACAATGCACGCTTTTGGGGTTGCGAGGCGGTAGGG
TTAGGTTCTAGTTGGGCGGCATTTTCCAGGCAAGCTTCTGTTCCTTCACG
AAAAACAAGTAACATCCAACGTCGAGACCGTGTTTTCTTGCGATGTGATT
AATTGCCTACTCTAGCCCGATACATACCGGACATGCCCGAGGAACTTTGC
CGGCGGACGCGCCGCTGATGACCGACTCGCAAAGGCTTTACCGTGCTTCG
CACTCCCTCGCACAATTAGCTGATTGAGGAATAACCAAACTGTATCAATT
ATGAGAGTTATGATATTCCAATCAAACGGGATGGTGGCGAAGGGGGACTC
GGTTCTTGAAGTTCTGGGCGGGAGGTGATATATCTTGACACATGTGCGCT
TATTCCGCCTTCCCGTATTGAAATTCGCTCATGGTCTCGCTCCATATTCG
TCGTGGTAGATTACCGTGCCAGTCTGCTCCGACCACCTCGCTCCCATTAC
TACGGCTGGGCTGCTGCATAGCCAAGATACTGGTTACAGTTACTCGGGAA
GGGTAAAGCTTTAGGACCGCTGCAAACCTCAGTGATAGTTAAGTGCAAAT
TAGTCAGCCGCAGCACCCTTTTCTCTTTGTTTGGTTCCAAGATTGTCATT
TCACGTATTAGTAGTATTAGTACTTGTAGTAGCTTCCTGAAGATGGGATG
AATACGTAGCTCTCTTCTCTCTGCTTAATCCTTCGCCTCTTGATAGAAGA
GGGGTTCAGGCGGGGGGGGGCGCTGCTGATACCTGGTCAAATAGGTTCGG
GTCTTTCGCCTCCTTACCTCATGAAAAACCACAACTAACTCCCCCCCCCC
TCTTTCATTTTACTCCAGAAGCTTGTCGCTATTGACAGTATGATCTGCTA
CTAGTTTCCCCTCTTATGCTGCTTCGCCTGTTCGCACCCTAGTTGGCT
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Coding sequence (CDS) from alignment at H-elongata_contig19969:3312..6659-

>mRNA_H-elongata_contig19969.5617.1 ID=mRNA_H-elongata_contig19969.5617.1|Name=mRNA_H-elongata_contig19969.5617.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig19969:3312..6659- (Himanthalia elongata Himel1 dioecious)
ATGTGGTTGGCGAAAGAAAAGATGTGGTTGGCGAAAGAAAAGGTATCTCT
TGCTGTTCAGACGACTCAGCCCCTGCTTCGTGCTCGTGATGTCGGCTTCT
CCACCCGCACGGTTTGGCTCGATGTTGAGCTAGGCAGGAAAGGGTCATCC
GGAGCGGCGGACGTGTCGACAGACATGTTTCTGGGGCATCTGTGCCCCAT
CGATGAATACCGAGTATACGGCTACATGACTAGCACGCGGCTGAAACTCT
TAGCGGTGTTGGAAGATGTGAATGACATTCGGGAGTCGGAGCTGAAGAGG
GTATCTCTTGCTGTTCAGACGACTCAGCCCCTGCTTCGTGCTCGTGATGT
CGGCTTCTCCACCCGCACGGTTTGGCTCGATGTTGAGCTAGGCAGGAAAG
GGTCATCCGGAGCGGCGGACGTGTCGACAGACATGTTTCTGGGGCATCTG
TGCCCCATCGATGAATACCGAGTATACGGCTACATGACTAGCACGCGGCT
GAAACTCTTAGCGGTGTTGGAAGATGTGAATGACATTCGGGAGTCGGAGC
TGAAGAGGGTATTTGCGACTATCCACAACCTCTACGTGAACAACCTTCGA
AATCCGTTTTCTCCTCTAGCGAAGCCGATTGACTCCGCCAAGTTCCGTCT
GGCAGTTGATCGACAAATCAACGAATACAATTCGTGAGTATTTGCGACTA
TCCACAACCTCTACGTGAACAACCTTCGAAATCCGTTTTCTCCTCTAGCG
AAGCCGATTGACTCCGCCAAGTTCCGTCTGGCAGTTGATCGACAAATCAA
CGAATACAATTCGTGA
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