prot_H-elongata_contig199200.5597.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199200.5597.1
Unique Nameprot_H-elongata_contig199200.5597.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: D8LBZ8_ECTSI (Protochlorophyllide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ8_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 3.290e-47
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0
Query:    1 QAHLGDLEGLAKNEAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTE 93
            QAHLGDL+GLAKNE MIDG+K+EPTKAYKDSKVCNVLMMREM+KR++  GMVVSALFPGCIAESPLFREKRGWFR  FP+FQK+VT+Q V+ E
Sbjct:  239 QAHLGDLDGLAKNEPMIDGVKYEPTKAYKDSKVCNVLMMREMNKRYSSGGMVVSALFPGCIAESPLFREKRGWFRAGFPVFQKFVTRQLVSVE 331          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A7S0M6J6_9CRYP (Protochlorophyllide reductase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M6J6_9CRYP)

HSP 1 Score: 132 bits (331), Expect = 2.410e-35
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    1 QAHLGDLEGLAKNEA------MIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFV 90
            QA LG+L GL  ++A      MIDG  F+PTKAYKDSK CNVL M+EM +RFA +G+  SA+FPGC+AESPLFR+KR WFR  FPLFQKY+TKQFV
Sbjct:  225 QADLGELSGLTGSDALRGAKSMIDGKAFDPTKAYKDSKACNVLTMKEMHRRFASKGVTFSAIFPGCVAESPLFRDKRDWFRFIFPLFQKYITKQFV 320          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: S0F3U3_CHOCR (Protochlorophyllide reductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U3_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 7.550e-34
Identity = 62/97 (63.92%), Postives = 73/97 (75.26%), Query Frame = 0
Query:    1 QAHLGDLEGLAKN----EAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTE 93
            QA LG+LEGL          IDG KFEPTKAYKDSKVCN+L M EM++R+  +G+  SA+FPGCIA+S LFREKRGWFR  FPLFQ+Y+TKQ V  E
Sbjct:  219 QADLGELEGLVGGFKTLPGTIDGKKFEPTKAYKDSKVCNILTMTEMNRRYGTDGVTFSAVFPGCIAQSELFREKRGWFRALFPLFQRYITKQLVPVE 315          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A1X6NIP3_PORUM (Protochlorophyllide reductase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIP3_PORUM)

HSP 1 Score: 126 bits (317), Expect = 1.840e-33
Identity = 62/98 (63.27%), Postives = 76/98 (77.55%), Query Frame = 0
Query:    1 QAHLGDLEGL-----AKNEAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTE 93
            QA+LGDL GL       +   +DG KFEPTKAYKDSKVCNVL M  + +R A +G++VSA++PGCIA+S LFR+KRGWFR  FPLFQKYVTKQ+V+ E
Sbjct:  159 QANLGDLAGLEAAVAGTSSGTVDGGKFEPTKAYKDSKVCNVLTMTALHERAAKDGVIVSAVYPGCIADSELFRQKRGWFRWFFPLFQKYVTKQYVSEE 256          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A7S1TKW4_9RHOD (Protochlorophyllide reductase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKW4_9RHOD)

HSP 1 Score: 128 bits (321), Expect = 2.800e-33
Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    1 QAHLGDLEGLAKN---EA-MIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTE 93
            QA LG L+GL K    EA MIDG KFEPTKAYKDSKVCN + M++M  R++  G+VVSALFPGC+A S LFREKRGWF + FP FQK +TKQ+VTT+
Sbjct:  231 QADLGQLQGLLKGLGEEAPMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYSPRGVVVSALFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVTTQ 327          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A5J4YUK9_PORPP (Protochlorophyllide reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUK9_PORPP)

HSP 1 Score: 125 bits (313), Expect = 3.900e-32
Identity = 61/97 (62.89%), Postives = 72/97 (74.23%), Query Frame = 0
Query:    1 QAHLGDLEGLAKN----EAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTE 93
            QA LG L GL K      AMIDG KFEPTKAYKDSKVCN + M++M  R+   G+VVSA+FPGC+A S LFREKRGWF + FP FQK +TKQ+V+ E
Sbjct:  228 QADLGRLAGLEKGLCGENAMIDGKKFEPTKAYKDSKVCNAITMKQMSDRYGPRGVVVSAMFPGCVASSGLFREKRGWFNSFFPWFQKNITKQYVSVE 324          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A2V3J6B4_9FLOR (Protochlorophyllide reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6B4_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 5.510e-32
Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    1 QAHLGDLEGLAKN----EAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTE 93
            QA LG L+G++         IDG  FEPTKAYKDSKVCN+L M+EM +R A  G+  +A+FPGCIA+S LFREKRGWFR  FPLFQKYVT+Q V  E
Sbjct:  213 QADLGQLQGMSSGFNTLPGTIDGKAFEPTKAYKDSKVCNILTMKEMHRRHASSGVAFTAIFPGCIAQSELFREKRGWFRWFFPLFQKYVTRQMVPVE 309          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A6T8NUL2_HEMAN (Protochlorophyllide reductase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NUL2_HEMAN)

HSP 1 Score: 126 bits (317), Expect = 5.740e-32
Identity = 61/91 (67.03%), Postives = 77/91 (84.62%), Query Frame = 0
Query:    2 AHLGDLEGLAKNEAM-IDGMKFEPTKAYKDSKVCNVLMMREMDKRFA-GEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFV 90
            A LG+LEG+ +  +  IDG ++EPTK+YK+SKVCN ++MREM+KR+A   G+ V+A+FPGCIAESPLFR+KRGWFR  FPLFQKYVTKQFV
Sbjct:  243 ADLGNLEGMKQGMSYTIDGGEYEPTKSYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRGWFRWLFPLFQKYVTKQFV 333          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: L1JNU2_GUITC (Protochlorophyllide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNU2_GUITC)

HSP 1 Score: 126 bits (317), Expect = 6.930e-32
Identity = 62/96 (64.58%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    2 AHLGDLEGLAKN-EAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFA-GEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTEAS 95
            A LG LEG+A   ++ IDG KFEPTKAYKDSKVCN ++MREM+KR+    G++V+A+FPGCIAESPLFR+KR WFR  FP FQK +TKQFV  E +
Sbjct:  246 ADLGKLEGMAAGMKSTIDGGKFEPTKAYKDSKVCNAIVMREMNKRYGKSRGLIVNAMFPGCIAESPLFRQKRAWFRWLFPKFQKAITKQFVPEEVA 341          
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Match: A0A7S0Z1U2_9CRYP (Protochlorophyllide reductase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1U2_9CRYP)

HSP 1 Score: 125 bits (315), Expect = 1.130e-31
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0
Query:    2 AHLGDLEGLAKN-EAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFA-GEGMVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFV 90
            A LG LEG+ K     IDG ++EPTKAYK+SKVCN ++MREM+KR+A   G+ V+A+FPGCIAESPLFR+KR WFR  FPLFQKYVTKQFV
Sbjct:  252 ADLGTLEGMKKGMTTTIDGGEYEPTKAYKESKVCNAIVMREMNKRYAESRGITVNAMFPGCIAESPLFRQKRDWFRWLFPLFQKYVTKQFV 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199200.5597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBZ8_ECTSI3.290e-4781.72Protochlorophyllide reductase n=2 Tax=Ectocarpus T... [more]
A0A7S0M6J6_9CRYP2.410e-3565.63Protochlorophyllide reductase (Fragment) n=1 Tax=C... [more]
S0F3U3_CHOCR7.550e-3463.92Protochlorophyllide reductase n=1 Tax=Chondrus cri... [more]
A0A1X6NIP3_PORUM1.840e-3363.27Protochlorophyllide reductase n=1 Tax=Porphyra umb... [more]
A0A7S1TKW4_9RHOD2.800e-3365.98Protochlorophyllide reductase n=1 Tax=Erythrolobus... [more]
A0A5J4YUK9_PORPP3.900e-3262.89Protochlorophyllide reductase n=1 Tax=Porphyridium... [more]
A0A2V3J6B4_9FLOR5.510e-3261.86Protochlorophyllide reductase n=1 Tax=Gracilariops... [more]
A0A6T8NUL2_HEMAN5.740e-3267.03Protochlorophyllide reductase n=1 Tax=Hemiselmis a... [more]
L1JNU2_GUITC6.930e-3264.58Protochlorophyllide reductase n=1 Tax=Guillardia t... [more]
A0A7S0Z1U2_9CRYP1.130e-3168.13Protochlorophyllide reductase n=1 Tax=Hemiselmis t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..96
e-value: 8.3E-9
score: 36.9
IPR005979Light-dependent protochlorophyllide reductasePANTHERPTHR44419FAMILY NOT NAMEDcoord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199200contigH-elongata_contig199200:319..924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199200.5597.1mRNA_H-elongata_contig199200.5597.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199200 319..924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199200.5597.1 ID=prot_H-elongata_contig199200.5597.1|Name=mRNA_H-elongata_contig199200.5597.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
QAHLGDLEGLAKNEAMIDGMKFEPTKAYKDSKVCNVLMMREMDKRFAGEG
MVVSALFPGCIAESPLFREKRGWFRTAFPLFQKYVTKQFVTTEASVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005979Prochl_reduct