prot_H-elongata_contig19910.5590.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19910.5590.1
Unique Nameprot_H-elongata_contig19910.5590.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length258
Homology
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.940e-83
Identity = 158/262 (60.31%), Postives = 184/262 (70.23%), Query Frame = 0
Query:    1 MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAA-GSVHPMFRQPGNKKEAATTARYVSLGLFKT---GGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEEEAVSGG 258
            MQM LHPTTADLQYV+KL ST  HAA VK+++T+K+IALAVELA+ E +R K  G  Q    AKRAR  AA GS+     +  NKK+ A TA++ SLGLFK    GG     PT E   RAEL+TLRG+  GTLT +LSCEGVL WWK+W   YPLL RAARVVFGAPAS  VL+R F+DA  MM SSRS+ DAKY  M++FLHGNLDLIPE I EL  +   D Q+KIPG LSNP+PEL GL G  G VDLT +E  V  G
Sbjct:  406 MQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMER-KQAGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDE---DVQAKIPGRLSNPIPELHGLDGTLGLVDLTNDEGGVGPG 663          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.340e-76
Identity = 149/256 (58.20%), Postives = 174/256 (67.97%), Query Frame = 0
Query:    1 MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAA-GSVHPMFRQPGNKKEAATTARYVSLGLFKTGG-GPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEEEA 254
            MQM LHP TADLQYV +LA T  HAA VK+ +T+K+IALA +LA  +A+R K     QG P AKRA   +A G+ +PMF      KEA TTA    LGL  T   G  A P   E  RAEL+TLR  +   L  + SCEGVL WWKR E SYPLL R ARVVF APASV V +R    AGRMMTSSRS+ DAKY  M++FLHGN+DL+PE I ELPADGVN  Q+KIPG LSNP+ EL  L G FGPVDLT ++E+
Sbjct:  512 MQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAER-KGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPI--ERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDES 764          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 5.740e-67
Identity = 136/262 (51.91%), Postives = 160/262 (61.07%), Query Frame = 0
Query:    1 MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAAG-SVHPMFRQPGNKKEAATTARYVSLGLFK---TGGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEEEAVSGG 258
            MQM LHPTTADLQYV+KLAS+  HAA V + +T+K+I LAVELA  E +R K  G  Q    AK+AR  AA  S HP   +  NK E A TA++ SL LFK    G      PT E    AE +TLRG+  G+LT +L CEGVL WW++WE SYPLL RAARV FGAPA+                      DAKY  M++FLHG LDL PE I EL  +   D  +KIPG LSNP+PEL GL G  GPVDLT +EE V  G
Sbjct:  205 MQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMER-KQAGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAA---------------------GDAKYVEMVLFLHGKLDLFPEQIPELRDE---DIHAKIPGRLSNPVPELHGLDGTLGPVDLTHDEEGVGPG 441          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.640e-64
Identity = 132/254 (51.97%), Postives = 157/254 (61.81%), Query Frame = 0
Query:    1 MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAAGSVHPMFRQPGNKKEAATTARYVSLGLFKTG--GGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 252
            MQMALHPTTA L+YVEKLAST+  A  VK T+T+KVI L V LA+  A  T D                  GS  P         E ATT  + SLGLF  G  G    P + ++  RAEL  LR +  G L A L CE VL WWK W  +YPLL R ARVVFGAPAS  VL+  FS+AGRM TSSRS+ D+ Y  MI+FLHGNL+LIPEDI +L  + V  A++K PG L+NP+  L+ L GAF PVDLT+EE
Sbjct:   28 MQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTGD------------------GSTTPAG-------EEATTNMHASLGLFGPGVDGQNEEPQSFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKL-TEVV--ARTKFPGRLANPVDGLEPLDGAFAPVDLTDEE 253          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.910e-64
Identity = 135/258 (52.33%), Postives = 163/258 (63.18%), Query Frame = 0
Query:    1 MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRG------GGQGSPGAKRARSVAAGSVHPMFRQPGNKKEAATTARYVSLGLFKTGGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 252
            MQMALHPTTADL+YV+KLAST+  A  VK T+T+KVI+LAV+LA+  A  T D             P AKRAR  AA         PG+K+E                     PP+ E+  RAEL  LR +  G+L A L CE VL WWK W  +YPLL R ARVV GA AS  VL+  FS+AGRMMTSSRS+ D+KY  MI+FLHGNLDLIPEDI +L  + V  A++KIPG L+NP+  L+ L GAF PVDLT+EE
Sbjct:  266 MQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAA---------PGSKEE---------------------PPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEAV--ARTKIPGRLANPVEGLEQLDGAFAPVDLTDEE 490          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 7.790e-63
Identity = 118/195 (60.51%), Postives = 138/195 (70.77%), Query Frame = 0
Query:   61 PGAKRARSVAA-GSVHPMFRQPGNKKEAATTARYVSLGLFKTGGGPP--APPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 252
            P AKRAR  AA GSVHP+F+ P NK+E ATT  Y SLGLF  GG      PP+ E+  RAEL  LR +  G+L   LSCE VL WWK W  +YPLL R ARVVFGAPAS  VL+R FS+AGRMMTSSRS+ D+KY  MI+FLHGNLDLIPEDI +L       A++KIPG L+NP+  L+ L G F PVDLT+EE
Sbjct:  526 PAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAA---ARTKIPGRLANPVERLEQLDGVFAPVDLTDEE 717          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.110e-34
Identity = 74/147 (50.34%), Postives = 89/147 (60.54%), Query Frame = 0
Query:  108 PPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSK-IPGWLSNPLPELQGLTGAFGPVDLTEEEE 253
            PP  E++   + +T+          ELSCE VL WWKRW SSYPLL RA RVVFGAPAS                       A Y  MI+FLHGNLDLIP+DI  LP DG + A +K +PG L NP P+L+ ++GAFGPVDLTEE+E
Sbjct:   15 PPWSEQSYALQKRTID---------ELSCESVLKWWKRWMSSYPLLARATRVVFGAPAS-----------------------AAYVEMILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNPNPKLERISGAFGPVDLTEEDE 129          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.100e-33
Identity = 66/103 (64.08%), Postives = 76/103 (73.79%), Query Frame = 0
Query:  108 PPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDI 210
            PP  E++   + +T+          ELSC+ VL WWKRW SSYPLL RAARVVFGAPAS  VL+  F DAGR+MTSSRS+TDAKY  MI+FLHGNLDLIPEDI
Sbjct:   15 PPWSEQSYALQKRTID---------ELSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDI 108          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.940e-32
Identity = 70/108 (64.81%), Postives = 82/108 (75.93%), Query Frame = 0
Query:  146 WESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAK-YEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 252
            W   YPLL R ARVVFGAPAS  VL+R FS+AGRMMTSSR + D+  Y  MI+FLHGNLDLIPEDI +L  + V  A+SKIPG L+NP+  L+ L GAF PVDLT+EE
Sbjct:    2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKL-TEAV--ARSKIPGRLANPVEGLEQLDGAFAPVDLTDEE 106          
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.190e-28
Identity = 66/105 (62.86%), Postives = 79/105 (75.24%), Query Frame = 0
Query:  149 SYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYE-GMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 252
            +Y LLT  ARVVFGAPAS   L+R FS+AGRMMTSSRS+ D+KY   MI+FLHGNLDLIPEDI  L  + V  A++  PG L+NP+  L+ L GAF PVDLT+EE
Sbjct:    5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTL-TEAV--ARTMFPGRLANPVEGLKQLDGAFTPVDLTDEE 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LBK4_ECTSI1.940e-8360.31Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LFP4_ECTSI1.340e-7658.20Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEK6_9PHAE5.740e-6751.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JML0_9PHAE1.640e-6451.97Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE2.910e-6452.33Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE7.790e-6360.51Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KGU9_9PHAE1.110e-3450.34Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L5L6_9PHAE2.100e-3364.08Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KCJ3_9PHAE1.940e-3264.81Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KW12_9PHAE4.190e-2862.86Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 139..203
e-value: 8.6E-12
score: 44.7
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 135..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19910contigH-elongata_contig19910:1647..2420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19910.5590.1mRNA_H-elongata_contig19910.5590.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19910 1647..4566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19910.5590.1 ID=prot_H-elongata_contig19910.5590.1|Name=mRNA_H-elongata_contig19910.5590.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=258bp
MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQR
TKDRGGGQGSPGAKRARSVAAGSVHPMFRQPGNKKEAATTARYVSLGLFK
TGGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSY
PLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLH
GNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTE
EEEAVSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf