mRNA_H-elongata_contig19910.5590.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 723 bits (1866), Expect = 2.160e-253 Identity = 402/673 (59.73%), Postives = 490/673 (72.81%), Query Frame = 1
Query: 10 VHWVKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVR-RLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIR--KSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEELYSLIKPVADLIVTCQ*THVLIGQAAVLGLAALKLSTFSVNSPFDILRPAHKLAQGGAAGTGGGEQKAPSAPKAHADLTQVARDAHKHLASAVNKRWFNKRYDSPATENT-DFVFDMQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAA-GSVHPMFRQPGNKKEAATTARYVSLGLFKT---GGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEEEAVSGG 2004
++WVK ++++GFCPLS+GEK WVR + A K FP+ LH +AV +++ Y+ATTAQF+AE+ AE+ LHL+LD+WV K S+L +MG + + + + + L+AVRQFNPT EM E++RLSA+L +YLT V EEF LDV+M+FSATSDA +DV+ RLC L+P LW+ CVCHMLNC+ VEAIG VDS+K NPAARKVV+ VKKVVE+IR KSP AKA F+E+Q RHYSQC HRKLVN APQRW V VLEA IVNR IDGVY +EG PL + +EI+ELYSLIKPVA+LIVTCQ THV GQAAVLGLA LKLSTF+V++ D+L P AQG GTGGGE+KA S P+ H LTQV RDA +HLASA+++R+F++ Y S +E T DFVFDMQM LHPTTADLQYV+KL ST HAA VK+++T+K+IALAVELA+ E +R K G Q AKRAR AA GS+ + NKK+ A TA++ SLGLFK GG PT E RAEL+TLRG+ GTLT +LSCEGVL WWK+W YPLL RAARVVFGAPAS VL+R F+DA MM SSRS+ DAKY M++FLHGNLDLIPE I EL + D Q+KIPG LSNP+PEL GL G G VDLT +E V G
Sbjct: 1 MNWVKWHVIEGFCPLSYGEKRWVRESLNQIAAKGFPLGRLHKEAVAKMVVEYYAATTAQFQAEITAEVGGVPRLHLDLDLWVDKSSTLMFMGVR----LFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR--AQGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMER-KQAGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDE---DVQAKIPGRLSNPIPELHGLDGTLGLVDLTNDEGGVGPG 663
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 659 bits (1701), Expect = 1.160e-227 Identity = 365/664 (54.97%), Postives = 448/664 (67.47%), Query Frame = 1
Query: 4 LGVHWVKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVRRLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIRKSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEELYSLIKPVADLIVTCQ*THVLIGQAAVLGLAALKLSTFSVNSPFDILRPAHKLAQGGAAGTGGGEQKAPSAPKAHADLTQVARDAHKHLASAVNKRWFNKRYDSPATENTDFVFDMQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAA-GSVHPMFRQPGNKKEAATTARYVSLGLFKTGGGPP--APPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 1986
L ++WVK I++GFCPLSHGEKEWVR + +L+A+K FP+TG+HN+AVK I + RLLH NLD+WV KFSSLKY+G + + ++ ++ + LIAVRQFNPT E+LE +RLSALL +YL +V EE+ LDV+++FSATSDA +DV+RLC +LLPGLWEWCVCHM+NCA VEA G HVD KS NP ARKV+ VKKVVE+IRKSPRAKA F+E+Q + Y+QC HRKLVNAAPQRW V NVLEAVIVNRAAIDGVY EGKD PLT+ +EI+ELYS+IKP A +IV CQ T V GQ AVL LAALKL T +V+SP +IL PA KLAQ +G GGGE+ A S P+ H+ T VA+ +H+ +V+ WF+KRY S +++TD+V + P T +L A H V T A P AKRAR AA GSVHP+F+ P NK+E ATT Y SLGLF GG PP+ E+ RAEL LR + G+L LSCE VL WWK W +YPLL R ARVVFGAPAS VL+R FS+AGRMMTSSRS+ D+KY MI+FLHGNLDLIPEDI +L A++KIPG L+NP+ L+ L G F PVDLT+EE
Sbjct: 108 LAMNWVKCNIIEGFCPLSHGEKEWVRASLKLTALKNFPITGIHNKAVKQMIGGM-------------------RLLHHNLDLWVDKFSSLKYIGIR----LFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDYVSTCRW---PCTRP-----RLTCAALHTGDVSTTPAGSAAA--------------------DEPAAKRARQAAAPGSVHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAA---ARTKIPGRLANPVERLEQLDGVFAPVDLTDEE 717
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 642 bits (1655), Expect = 4.800e-220 Identity = 360/663 (54.30%), Postives = 456/663 (68.78%), Query Frame = 1
Query: 10 VHWVKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVRRLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIRKSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEELYSLIKPVADLIVTCQ*THVLIGQAAVLGLAALKLSTFSVNSPFDILRPAHKLAQGGAAGTGGGEQKAPSAPKAHADLTQVARDAHKHLASAVNKRWFNKRYDSPATENTDFVFDMQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAA-GSVHPMFRQPGNKKEAATTARYVSLGLFKTGG-GPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEEEA 1992
+ WV+ ++++ PL+ GE E V+ + LSA + F + + Q VK +++ Y+AT AQFK EMA E+A LHL+L++WV K SSLKYMG + + + +L+AVRQFNPT E L+++RLS LL +Y+ V EEF +D +++FSATSDA DV+RLC +LLPGL EWCVCHML+ + EA+G V Q+ AAR VV+ VKK VE +RKSP +K F E+Q +SQCS+RK+VNAAPQRW V LEA + NRAAI+GVY +EG+D PL+ + EI+ELYSLI+PVA++I TCQ TH GQAAVLGLAALKLST + ++P DIL PA K QG G GG EQ+ + +AH DLT+V R+A +HLASA++ R F+KRY S ++T VFDMQM LHP TADLQYV +LA T HAA VK+ +T+K+IALA +LA +A+R K QG P AKRA +A G+ +PMF KEA TTA LGL T G A P E RAEL+TLR + L + SCEGVL WWKR E SYPLL R ARVVF APASV V +R AGRMMTSSRS+ DAKY M++FLHGN+DL+PE I ELPADGVN Q+KIPG LSNP+ EL L G FGPVDLT ++E+
Sbjct: 113 LEWVQRHVIECCSPLTLGETEGVKTSVLLSA-RSFAPSRIRKQEVKRMVVECYAATAAQFKEEMATEVAGVPCLHLSLELWVDKSSSLKYMGVR----FFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGG-EQR--TTARAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAER-KGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPI--ERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNPMLELHALDGEFGPVDLTNDDES 764
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 514 bits (1324), Expect = 4.750e-174 Identity = 293/554 (52.89%), Postives = 357/554 (64.44%), Query Frame = 1
Query: 343 LIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVRRLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIRKSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEELYSLIKPVADLIVTCQ*THVLIGQAAVLGLAALKLSTFSVNSPFDILRPAHKLAQGGAAGTGGGEQKAPSAPKAHADLTQVARDAHKHLASAVNKRWFNKRYDSPATENTDFVFDMQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRG------GGQGSPGAKRARSVAAGSVHPMFRQPGNKKEAATTARYVSLGLFKTGGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 1986
LIAVRQFNPT E+LE +RLS LL +YL V E+ LDV+++FSATSDA +DV+RLC +LLPGLWEWCVCHM+NCA V+A G HVD KS NP ARKV+ VK +VE+IRKSPRAKA F+E+Q R Y+QC HRKLVNAAPQRW V NVLEAVIVNR AIDGVY EGK PLT+ DEI+EL+ +IKP A +IV+ GE+ A S P+ H+ LT VAR +H+ +V+ RWF+KRY S +++TD+VFDMQMALHPTTADL+YV+KLAST+ A VK T+T+KVI+LAV+LA+ A T D P AKRAR AA PG+K+E PP+ E+ RAEL LR + G+L A L CE VL WWK W +YPLL R ARVV GA AS VL+ FS+AGRMMTSSRS+ D+KY MI+FLHGNLDLIPEDI +L + V A++KIPG L+NP+ L+ L GAF PVDLT+EE
Sbjct: 19 LIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVS-------------------------------------------------GERPATSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGSTTPAWSAAADKPAAKRARQAAA---------PGSKEE---------------------PPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEAV--ARTKIPGRLANPVEGLEQLDGAFAPVDLTDEE 490
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 415 bits (1066), Expect = 7.490e-136 Identity = 260/485 (53.61%), Postives = 303/485 (62.47%), Query Frame = 1
Query: 568 PVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIRKS--PRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEELYSLIKPVADLIVTCQ*THVLIGQAAVLGLAALKLSTFSVNSPFDILRPAHKLAQGGAAGTGGGEQKAPSAPKAHADLTQVARDAHKHLASAVNKRWFNKRYDSPATENTDFVFDMQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAAG-SVHPMFRQPGNKKEAATTARYVSLGLFK---TGGGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEEEAVSGG 2004
P AIG VDS+K N AARK+V+ VKKVVE+IRKS P A+A F+E+Q RHYSQC HRKLVN APQRW V VLEA IVNR IDGVY +EG PL + +I+ELYS+IKPVA+LIVT Q THV GQAA LGLAALKLSTF+V++ D+L PA AQG G GG E KA S P+ + K DS T TDFVFDMQM LHPTTADLQYV+KLAS+ HAA V + +T+K+I LAVELA E +R K G Q AK+AR AA S HP + NK E A TA++ SL LFK G PT E AE +TLRG+ G+LT +L CEGVL WW++WE SYPLL RAARV FGAPA+ DAKY M++FLHG LDL PE I EL + D +KIPG LSNP+PEL GL G GPVDLT +EE V G
Sbjct: 10 PRTAIGTRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR--AQGRPEGAGGVEPKATSVPRCY------------------------KPADSAKT--TDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMER-KQAGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAA---------------------GDAKYVEMVLFLHGKLDLFPEQIPELRDE---DIHAKIPGRLSNPVPELHGLDGTLGPVDLTHDEEGVGPG 441
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 379 bits (972), Expect = 1.090e-121 Identity = 182/295 (61.69%), Postives = 236/295 (80.00%), Query Frame = 1
Query: 4 LGVHWVKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVRRLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIRKSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEEL 888
L + WVK +++GFCP+SHGEKEWVR + +L+A+K FP+TG+HN+AVK ++++Y+AT +QFK EMAA+I RLLHL+LD+WV KFSSLKY+G + + ++ + LIAVRQFNPT E+LE +RLSAL+ ++L +V EE+ LDV+++FSATSD+ +DV+RLC +LLPGLWEWCVCHM+NCA VEA G HVDS KS NP ARKV+ + KKVVE+I KSPRAKA F+++Q R Y+QC HRKLVNAAPQRW V NVLEAVIVNRAA++ VY EGKD PLT+ +EI+EL
Sbjct: 163 LAMKWVKCNMIEGFCPVSHGEKEWVRASLKLTALKNFPITGIHNEAVKQMVVEMYAATASQFKMEMAAQIGGMRLLHLSLDLWVDKFSSLKYVG----IPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE) HSP 1 Score: 347 bits (889), Expect = 1.910e-111 Identity = 176/299 (58.86%), Postives = 226/299 (75.59%), Query Frame = 1
Query: 1 CLGVHWVKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVRRLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKK---VVEYIRKSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEEL 888
CL ++WVK I+QGFCPLSHGEKEWVR + +L+A+K FP+TG+HN+AVK ++++Y+AT +QFK EMAA+I RLLHLNLD+WV KFSSLKY+G + + + ++ + LIAVRQFNPT E+LE +RLSALL +YL +V EE+ LDV+++FSATSDA +DV+RLC +LLPGLWEWCVCHM+NCA VEA G HV+ KS NP + +K V I +S A F+++Q R Y+QC HRKLVNAAPQRW V NVLEAVIVNRAA++ VY EGKD PLT+ +EI+EL
Sbjct: 9 CLAMNWVKCNIIQGFCPLSHGEKEWVRASLQLTALKNFPITGIHNKAVKQMVVEMYAATASQFKMEMAAQIGGMRLLHLNLDLWVDKFSSLKYIGIR----LFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSE-VGAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 300 bits (767), Expect = 2.770e-93 Identity = 178/357 (49.86%), Postives = 225/357 (63.03%), Query Frame = 1
Query: 10 VHWVKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVRRLCGILLPGLWEWCVCHMLNCAPVEAIGKHVDSQKSANPAARKVVVVVKKVVEYIRKSPRAKAFFKEKQDRHYSQCSHRKLVNAAPQRWCSVCNVLEAVIVNRAAIDGVYGKEGKDKPLTAYGDEIEELYSLIKPVADLIVTCQ*THVLIGQAAVLGLAALKLSTFSVNSPFDILRPAHKLAQGGAAGTGGGE 1080
++WVK I++GFCPLSHG KEWVR + +L+A L+N+AVK ++ +Y+AT +Q+K EMAA+I RLLHLN D+WV KFSSLK +G + + + ++ + LIAVRQFNPT E+LE +RL ALL +YL +V EE+ LDV+++FSATSDA +D A G HVD KS +P RKV+ VK V+E+IRKSPRAK F A C V NVLEAVIVNRAAIDGVY EGKD PLT+ DEI+EL+S+IKP A +IV CQ T V Q AVL LAALKL+T +V+SP +IL PA KLAQ G +G GG E
Sbjct: 1 MNWVKCNIIEGFCPLSHGGKEWVRASLKLTA--------LNNKAVKQVVVDMYAATASQYKMEMAAQIGGMRLLHLNRDLWVDKFSSLKCIGIR----LFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSD---------------------------AFGTHVDPAKSRSPVVRKVIATVKMVMEHIRKSPRAKVSF-------------------AVVIGCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGRE 299
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 237 bits (604), Expect = 8.180e-70 Identity = 144/281 (51.25%), Postives = 177/281 (62.99%), Query Frame = 1
Query: 1150 LASAVNKRWFNKRYDSPATENTDFVFDMQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRTKDRGGGQGSPGAKRARSVAAGSVHPMFRQPGNKKEAATTARYVSLGLFKTG--GGPPAPPTIEENVRAELKTLRGLATGTLTAELSCEGVLMWWKRWESSYPLLTRAARVVFGAPASVTVLKRAFSDAGRMMTSSRSSTDAKYEGMIIFLHGNLDLIPEDIAELPADGVNDAQSKIPGWLSNPLPELQGLTGAFGPVDLTEEE 1986
+ +V+ R F+KRY S +++TD+VFDMQMALHPTTA L+YVEKLAST+ A VK T+T+KVI L V LA+ A T D GS P E ATT + SLGLF G G P + ++ RAEL LR + G L A L CE VL WWK W +YPLL R ARVVFGAPAS VL+ FS+AGRM TSSRS+ D+ Y MI+FLHGNL+LIPEDI +L + V A++K PG L+NP+ L+ L GAF PVDLT+EE
Sbjct: 1 MCESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTGD------------------GSTTPAG-------EEATTNMHASLGLFGPGVDGQNEEPQSFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKL-TEVV--ARTKFPGRLANPVDGLEPLDGAFAPVDLTDEE 253
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE) HSP 1 Score: 154 bits (388), Expect = 9.600e-40 Identity = 85/172 (49.42%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 19 VKNYIVQGFCPLSHGEKEWVRVNWRLSAVKEFPVTGLHNQAVKHKIIKIYSATTAQFKAEMAAEIAVGRLLHLNLDIWVGKFSSLKYMGKQRVTSIAFSRQSCSVVLHLIAVRQFNPTSEMLESDRLSALLAEYLTTVFEEFNLDVNMIFSATSDASNDVR-RLCGILLPGL 531
VK ++++G CPLS+GEK VR + A K FP+ LH + V +++ Y+ATTAQFKAE+AAE+ LHL+L++WV K S+L +MG + + + + + L+AVRQFNPT EM E++RLS LL ++LT V E F LDV M+FSATSDA +DV+ RLC IL+P L
Sbjct: 17 VKWHVIEGCCPLSYGEKRRVRESLNQIAAKGFPLDRLHKETVAKMVVEYYAATTAQFKAEIAAEVGGVPRLHLDLELWVDKSSTLMFMGVR----LFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVLE-FGLDVYMLFSATSDAGSDVKHRLCYILIPRL 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19910.5590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19910.5590.1 >prot_H-elongata_contig19910.5590.1 ID=prot_H-elongata_contig19910.5590.1|Name=mRNA_H-elongata_contig19910.5590.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=258bp MQMALHPTTADLQYVEKLASTAKHAATVKETVTNKVIALAVELAKTEAQRback to top mRNA from alignment at H-elongata_contig19910:1647..4566- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19910.5590.1 ID=mRNA_H-elongata_contig19910.5590.1|Name=mRNA_H-elongata_contig19910.5590.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2920bp|location=Sequence derived from alignment at H-elongata_contig19910:1647..4566- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19910:1647..4566- >mRNA_H-elongata_contig19910.5590.1 ID=mRNA_H-elongata_contig19910.5590.1|Name=mRNA_H-elongata_contig19910.5590.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1548bp|location=Sequence derived from alignment at H-elongata_contig19910:1647..4566- (Himanthalia elongata Himel1 dioecious)back to top |