prot_H-elongata_contig19902.5586.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19902.5586.1
Unique Nameprot_H-elongata_contig19902.5586.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.020e-71
Identity = 115/131 (87.79%), Postives = 121/131 (92.37%), Query Frame = 0
Query:    4 KRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMKEVCPAT 134
            +RYKELLTHVS+VTRNESSDSVNGILDTVSVSEDLRMVS+MYETTLSALK+EGNERMWFNT VKLAKVYLQIPDY KVQ TID LH SCRLA+G DDP KGNQLLEVYGITIQL TATNNNI+MKEV P T
Sbjct:    3 QRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKT 133          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.230e-70
Identity = 115/131 (87.79%), Postives = 121/131 (92.37%), Query Frame = 0
Query:    4 KRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMKEVCPAT 134
            +RYKELLTHVS+VTRNESSDSVNGILDTVSVSEDLRMVS+MYETTLSALK+EGNERMWFNT VKLAKVYLQIPDY KVQ TID LH SCRLA+G DDP KGNQLLEVYGITIQL TATNNNI+MKEV P T
Sbjct:   95 QRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKT 225          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 9.970e-40
Identity = 74/132 (56.06%), Postives = 91/132 (68.94%), Query Frame = 0
Query:    1 ECLKRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMKEVCP 132
            + L+RY+E+L +VS VTRNE +DS+N +LDTVS   DL+ V E+Y  TL ALK  GNER+WFNT  KLAK YLQ  D+     TI  LH +C  ADG+DD  KG  LLEVYG+ IQL TAT +   M+EV P
Sbjct:   68 QMLERYREMLGYVSRVTRNECTDSINQVLDTVSACTDLKSVGEVYRLTLGALKSGGNERLWFNTKAKLAKAYLQGGDFAAADHTIAELHRTCTGADGADDQSKGTYLLEVYGLIIQLCTATKDTARMREVYP 199          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A2K6B641_MACNE (Uncharacterized protein n=4 Tax=Euteleostomi TaxID=117571 RepID=A0A2K6B641_MACNE)

HSP 1 Score: 138 bits (347), Expect = 6.330e-38
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:   87 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 215          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A7N9D8X0_MACFA (COP9 signalosome complex subunit 2 n=4 Tax=Euteleostomi TaxID=117571 RepID=A0A7N9D8X0_MACFA)

HSP 1 Score: 138 bits (348), Expect = 1.220e-37
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:   87 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDSKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 215          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A7L3Z7H9_FREGA (CSN2 protein (Fragment) n=3 Tax=Amniota TaxID=32524 RepID=A0A7L3Z7H9_FREGA)

HSP 1 Score: 138 bits (347), Expect = 1.420e-37
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:   69 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 197          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A7L3WQW0_9GRUI (CSN2 protein (Fragment) n=3 Tax=Amniota TaxID=32524 RepID=A0A7L3WQW0_9GRUI)

HSP 1 Score: 138 bits (347), Expect = 2.310e-37
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:   69 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 197          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A6F9AGL3_9TELE (COP9 signalosome complex subunit 2 n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9AGL3_9TELE)

HSP 1 Score: 138 bits (347), Expect = 5.780e-37
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:   39 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLDALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 167          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A7J8JRV1_MOLMO (COP9 signalosome complex subunit 2 n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8JRV1_MOLMO)

HSP 1 Score: 138 bits (347), Expect = 5.890e-37
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:   13 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 141          
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Match: A0A7J8AZJ1_PIPKU (COP9 signalosome complex subunit 2 n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A7J8AZJ1_PIPKU)

HSP 1 Score: 138 bits (347), Expect = 6.380e-37
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 0
Query:    1 ECLKRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLSALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDDPMKGNQLLEVYGITIQLSTATNNNIMMK 128
            E + RYK+LLT++ SAVTRN S  S+N ILD +S S+ + ++ E YETTL ALKD  N+R+WF TN KL K+YL+  +YGK+Q  +  LH SC+  DG DD  KG QLLE+Y + IQ+ TA  NN  +K
Sbjct:    6 EMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALEIQMYTAQKNNKKLK 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19902.5586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI1.020e-7187.79COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE1.230e-7087.79COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A836CJA4_9STRA9.970e-4056.06COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A2K6B641_MACNE6.330e-3852.71Uncharacterized protein n=4 Tax=Euteleostomi TaxID... [more]
A0A7N9D8X0_MACFA1.220e-3752.71COP9 signalosome complex subunit 2 n=4 Tax=Euteleo... [more]
A0A7L3Z7H9_FREGA1.420e-3752.71CSN2 protein (Fragment) n=3 Tax=Amniota TaxID=3252... [more]
A0A7L3WQW0_9GRUI2.310e-3752.71CSN2 protein (Fragment) n=3 Tax=Amniota TaxID=3252... [more]
A0A6F9AGL3_9TELE5.780e-3752.71COP9 signalosome complex subunit 2 n=1 Tax=Coregon... [more]
A0A7J8JRV1_MOLMO5.890e-3752.71COP9 signalosome complex subunit 2 n=1 Tax=Molossu... [more]
A0A7J8AZJ1_PIPKU6.380e-3752.71COP9 signalosome complex subunit 2 n=2 Tax=Euteleo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 2..134
e-value: 2.5E-13
score: 52.0
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 2..129
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 2..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19902contigH-elongata_contig19902:400..1453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19902.5586.1mRNA_H-elongata_contig19902.5586.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19902 400..1453 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19902.5586.1 ID=prot_H-elongata_contig19902.5586.1|Name=mRNA_H-elongata_contig19902.5586.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
ECLKRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMVSEMYETTLS
ALKDEGNERMWFNTNVKLAKVYLQIPDYGKVQATIDALHGSCRLADGSDD
PMKGNQLLEVYGITIQLSTATNNNIMMKEVCPAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037750COPS2