prot_H-elongata_contig197538.5517.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197538.5517.1
Unique Nameprot_H-elongata_contig197538.5517.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: A0A6H5KUA5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA5_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 7.730e-26
Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 0
Query:    1 RFGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHLH 97
            R+G+V LYDD AVKN Y  PLG + VID+EY T IV QI+ ADTT D  +W+    + SR    P  F+ DAD AMT A R+V P+ L RRC WHL+
Sbjct:  245 RYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDALLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLN 341          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.710e-24
Identity = 52/97 (53.61%), Postives = 65/97 (67.01%), Query Frame = 0
Query:    1 RFGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHLH 97
            R+G+V LYDD AVKN Y  PLG + VID+EY T IV QI+ ADTT DTF+ +    + SR    P  F+ DAD AMT A R+V P+ L RRC W+L+
Sbjct:  296 RYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDTFLSMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWYLN 392          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: A0A453CHV3_AEGTS (Protein FAR1-RELATED SEQUENCE n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453CHV3_AEGTS)

HSP 1 Score: 76.6 bits (187), Expect = 2.210e-14
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0
Query:    2 FGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            FG+VI +D     N Y  P G  V ++  + + I+A +L+ D T D+F+WVF++++       P   + D + AM  A  KVMPNT HR C+WH+
Sbjct:   73 FGDVITFDTTYRTNLYDMPFGLFVGVNNHFQSVIMAGVLVRDETEDSFVWVFSEFLRMMGGSAPVTILTDQNRAMELAISKVMPNTAHRWCKWHV 167          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: UPI001036D65D (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036D65D)

HSP 1 Score: 73.6 bits (179), Expect = 3.140e-13
Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    1 RFGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            +FG+V+++D     N Y  P   +  + + + T I A +LLA+ T++T+IWV   ++ +     P   + D D AM  A R+V P+  HR C WHL
Sbjct:  269 KFGDVLIFDSTYRTNAYKKPFVMLAGVTSHFRTTIFACVLLANETIETYIWVLETFMEAMGNKAPVSVLTDGDKAMREAIRRVFPDARHRLCNWHL 364          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: UPI0010364578 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010364578)

HSP 1 Score: 72.8 bits (177), Expect = 7.140e-13
Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 0
Query:    2 FGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            FG+V+++D     N Y  P   +  +   + T +    LLA  T++T+IWV  K++ + +   P   +ID D AM  A + VMP   HR C+WHL
Sbjct:  220 FGDVLMFDTTYRTNAYNKPFVILQGVSNHFQTTVFGCALLASETVETYIWVLEKFLDAMDHKMPLSVIIDGDKAMCRAIKTVMPTARHRLCKWHL 314          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: UPI001036D4D2 (protein FAR-RED IMPAIRED RESPONSE 1-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036D4D2)

HSP 1 Score: 71.2 bits (173), Expect = 7.300e-13
Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    2 FGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            FG+V+++D     N Y  P   +  +   + T +    LLA  T++T+IWV  K++ + +   P   + D D AM  A + VMP   HR C+WHL
Sbjct:   84 FGDVLMFDTTYRTNAYNKPFVILQGVSNHFQTTVFGCALLASKTVETYIWVLEKFLDAMDHKMPLSIITDGDKAMCRAIKTVMPTARHRLCKWHL 178          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: UPI00188E3046 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI00188E3046)

HSP 1 Score: 71.6 bits (174), Expect = 1.780e-12
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    2 FGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            FG+ I +D     N Y  P G  V ++  + T I   +L+ D T++TF WVF ++I       P+  + D   AM  A +KVMP+T HR C+WH+
Sbjct:  171 FGDAITFDTTYRTNMYDMPFGLFVGVNNHFQTIIFGGVLVRDETVETFEWVFTEFIRMMGGKHPQTVLTDQCRAMELALQKVMPDTTHRWCKWHV 265          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: A0A453LIA1_AEGTS (MULE domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LIA1_AEGTS)

HSP 1 Score: 70.5 bits (171), Expect = 2.430e-12
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    2 FGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            FG+ I +D     N Y  P G  V ++  + + I   +LL D TM+TF WVF ++I       P+  + D   A+  A  KVM NT HR C+WH+
Sbjct:  171 FGDAITFDTTYRTNMYHMPFGLFVGVNNHFQSVIFGGVLLRDETMETFEWVFTEFIRMMGGKHPQTILTDQCRAVELAIEKVMSNTTHRWCKWHI 265          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: UPI0010355B0F (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010355B0F)

HSP 1 Score: 70.9 bits (172), Expect = 3.280e-12
Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0
Query:    2 FGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
            FG+V+++D     N Y  P   +  +   + T +    LLA  T++T+IWV  K++ + +   P   + D D AM  A + VMP   HR C+WHL
Sbjct:  279 FGDVLMFDTTYRTNAYNKPFVILQGVSNHFQTTVFGCALLASETVETYIWVLEKFLDAMDHKMPLSVITDGDKAMCRAIKTVMPTARHRLCKWHL 373          
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Match: A0A5J4ZHJ7_9ASTE (Protein FAR1-RELATED SEQUENCE n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZHJ7_9ASTE)

HSP 1 Score: 70.1 bits (170), Expect = 6.320e-12
Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 0
Query:    1 RFGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFIWVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHL 96
             FG+V+ +D   + N Y  P    V ++   ++ ++   L+++   DTF W+F  ++       P G + D D AM  A  KV+PNT HR C WH+
Sbjct:  105 EFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCGLISNEDTDTFTWLFQTWLTCMSGRAPSGIITDQDKAMKKAIEKVLPNTCHRWCLWHI 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197538.5517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUA5_9PHAE7.730e-2653.61MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUZ2_9PHAE1.710e-2453.61SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A453CHV3_AEGTS2.210e-1437.89Protein FAR1-RELATED SEQUENCE n=2 Tax=Aegilops tau... [more]
UPI001036D65D3.140e-1334.38protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Camel... [more]
UPI00103645787.140e-1334.74protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Camel... [more]
UPI001036D4D27.300e-1333.68protein FAR-RED IMPAIRED RESPONSE 1-like n=1 Tax=C... [more]
UPI00188E30461.780e-1236.84protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Triti... [more]
A0A453LIA1_AEGTS2.430e-1236.84MULE domain-containing protein n=2 Tax=Aegilops ta... [more]
UPI0010355B0F3.280e-1233.68protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Camel... [more]
A0A5J4ZHJ7_9ASTE6.320e-1232.29Protein FAR1-RELATED SEQUENCE n=1 Tax=Nyssa sinens... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 14..96
e-value: 9.2E-13
score: 48.4
NoneNo IPR availablePANTHERPTHR47482:SF4coord: 2..95
NoneNo IPR availablePANTHERPTHR47482FAMILY NOT NAMEDcoord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197538contigH-elongata_contig197538:232..525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197538.5517.1mRNA_H-elongata_contig197538.5517.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197538 232..525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197538.5517.1 ID=prot_H-elongata_contig197538.5517.1|Name=mRNA_H-elongata_contig197538.5517.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
RFGNVILYDDVAVKNNYIFPLGFMVVIDAEYNTCIVAQILLADTTMDTFI
WVFNKYIASRERLTPRGFVIDADVAMTGAARKVMPNTLHRRCQWHLH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom