prot_H-elongata_contig197351.5507.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197351.5507.1
Unique Nameprot_H-elongata_contig197351.5507.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length258
Homology
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 3.720e-39
Identity = 84/241 (34.85%), Postives = 130/241 (53.94%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+LMW A  TRPDI+ A   +A++  +P   HWRA    L Y++RT DLGIT+                             +  +VDADY +    R SVSGG V+  GG ISWFSR QK    +++E+EYV+L +++ E+ FLRQV  FM P             +  ++  +   S+  ++H+D++HH +R+ +G   + + +V S  QHAD LTK++    FE H   +++
Sbjct:  216 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITF--------------------RRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMS 436          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 8.680e-39
Identity = 80/241 (33.20%), Postives = 130/241 (53.94%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+LMW A  TRPDI+ A   +A++  +P   HWRA    L Y++RT DLGIT+                             +  + DADY +    R SVSGG V+  GG +SWFSR QK    +++E+EYV+L +++ E+ FLRQV+ F+ P             +  ++  +   S+  ++H+D++HH +R+ +    + + +V S  QHAD LTK+++   FE H   +++
Sbjct:   32 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITF--------------------RRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDFECHRNYVMS 252          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 3.710e-38
Identity = 84/241 (34.85%), Postives = 130/241 (53.94%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+LMW A  TRPDI+ A   +A++  +P   HWRA    L Y++RT DLGIT+                             +  +VDADY +    R SVSGG V+  GG ISWFSR QK    +++E+EYV+L +++ E+ FLRQV  FM P             +  ++  +   S+  ++H+D++HH +R+ +G   + + +V S  QHAD LTK++    FE H   +++
Sbjct:  390 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITF--------------------RRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMS 610          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.180e-37
Identity = 82/241 (34.02%), Postives = 128/241 (53.11%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+LMW A  TRP+I+ AA  +A++  +P   HWRA    L Y++RT DLGIT+G                            +  + DADY +    R SVSGG V+   G ISWFSR Q+    +++E+EYV+L +++ E+ FLRQV  FM P             +  ++  +   S+  ++H D++HH + + +G   + + YV S  QHAD LTK++    FE H   +++
Sbjct:   71 PFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFG--------------------RGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALHFGDFEFHRNFVMS 291          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5LC04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC04_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.740e-37
Identity = 85/241 (35.27%), Postives = 131/241 (54.36%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+L+W A  TRPDI+ A   +A++  +P   HWRA    L Y++RT DLGIT+G                            +  + DADY +    R SVSGG V+  GG ISWFSR QK    +++E+EYV++ +++ EL FLR+V  FM P             +  L+  +   S+  ++H+D++HH +R+ +G   + + +V S  QHAD LTK++ V  FE H   ++N
Sbjct:  907 PFRELIGSLVWLATQTRPDIANALRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFG--------------------RGSVAMLSMEVFGDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSVADVMKELLFLRKVWRFMLPEAGMPCIPVFEDNQRALQLAQNPISNSNSKHIDVRHHSIRELVGREEISIFHVESAYQHADFLTKALHVGDFEFHRNFVMN 1127          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 4.390e-37
Identity = 83/241 (34.44%), Postives = 130/241 (53.94%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+LMW A  TRPDI+ A   +A++  +P   HWRA    L Y++RT DLGIT+                             +  +VDADY +    R SVSGG V+  GG ISWFSR QK    +++E+EYV+L +++ E+ FLRQV  FM P             +  ++  +   S+  ++H+D++HH +R+ +G   + + +V S  QHA+ LTK++    FE H   +++
Sbjct:  911 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITF--------------------RRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMS 1131          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5L0C9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C9_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.500e-36
Identity = 82/241 (34.02%), Postives = 129/241 (53.53%), Query Frame = 0
Query:    5 PYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            P+RE++G+LMW A  TRPDI+ A   +A++  +P   HWRA    L  ++RT DLGIT+                             +  + DADY +    R SVSGG V+  GG ISWFSR QK    +++E+EYV+L +++ E+ FLRQV  FM P    S        +  ++  +   S+  ++H+D++HH +R+ +G   + + +V S  Q+AD LTK++    FE H   +++
Sbjct:  675 PFRELIGSLMWLATQTRPDIANAVRAVARYYASPKEIHWRAGLGILGCVVRTSDLGITF--------------------RRRSVAGLSIEVFADADYASKAADRRSVSGGLVICGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMSCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQYADFLTKALHAGDFEFHRNYVMS 895          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A0J7K651_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K651_LASNI)

HSP 1 Score: 145 bits (367), Expect = 5.260e-36
Identity = 86/242 (35.54%), Postives = 136/242 (56.20%), Query Frame = 0
Query:    4 IPYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            +PYR+IVG+LM+ A+ TRPD+S+    L+KF + P   HW AA++ L+YL RT ++GIT+ G                           L A+ D+DY +CPDTR S+S   ++   G + W SR Q + AT+++++EYVA+ E   E+ ++R++   +   Q  +   Y      QL  +   +  RRT+HVD+K H  R+ +  G++ V+++ S  Q ADILTK++  + F K   SLLN
Sbjct: 1081 VPYRQIVGSLMYLAVATRPDLSYVVSVLSKFLERPSNAHWNAAKRVLKYLKRTLNVGITFDGN--------------------CDQSNQLVAFSDSDYASCPDTRKSISSVVLMFNNGPVIWSSRKQSIVATSTTDAEYVAMCEAAKEVVWIRRLLNELGIHQEHATVLYCDNAAAQLLVKNPVYH-RRTKHVDVKFHYTREQVKNGLIEVKHIESSNQLADILTKNLSCNKF-KFNCSLLN 1300          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.010e-35
Identity = 79/242 (32.64%), Postives = 129/242 (53.31%), Query Frame = 0
Query:    4 IPYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLN 245
            +P+RE+VG+LMW A  TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+                             +  +VDADY +    R SVSGG V+  GG ++WFSR QK    +++E+EYVA+ +++ E+ FLRQV  FM P  S          +  ++      ++  ++H+D++HH +R+ +    + + +V +  QHAD LTK++   +F  H   ++N
Sbjct:  153 VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITF--------------------ERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMN 374          
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB)

HSP 1 Score: 136 bits (343), Expect = 1.380e-35
Identity = 84/247 (34.01%), Postives = 136/247 (55.06%), Query Frame = 0
Query:    1 MRQIPYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLLRTRDLGITYGGEPXXXXFVGPGGARXXXXXXXXXXXXXLSAWVDADYGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVNELRFLR-QVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKHHIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLNH 246
            M+++PYRE VG LM+AA++TRPDI +A  Q+++F +NPG  HW+A ++ L+Y+  T+ +GI Y G                            +A+ DAD+    DTR S +G   +MAGG + W S  QK  + +++E+EYVA  +   E+ +LR  ++E     ++ +P        ++L   K     ++T+H+DIK+H +R+ +  G + + YV + EQ ADILTK+V    F  +  SL  H
Sbjct:   32 MQEMPYREAVGCLMFAAILTRPDIMYAVSQVSRFLNNPGKEHWKAVKRILRYIQGTKYMGIKYSGS-----------------------HIDFTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLT--KNTEHHKKTKHIDIKYHYIRECVEHGAIKIIYVCTEEQLADILTKAVPRDKFLINRTSLSIH 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197351.5507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE3.720e-3934.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTK6_9PHAE8.680e-3933.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE3.710e-3834.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE1.180e-3734.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LC04_9PHAE1.740e-3735.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2R1_9PHAE4.390e-3734.44Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5L0C9_9PHAE3.500e-3634.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A0J7K651_LASNI5.260e-3635.54Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A6H5L4G9_9PHAE1.010e-3532.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001C9BC1AB1.380e-3534.01secreted RxLR effector protein 161-like n=1 Tax=Ve... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 93..208
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..64
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 93..208
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197351contigH-elongata_contig197351:124..897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197351.5507.1mRNA_H-elongata_contig197351.5507.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197351 118..897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197351.5507.1 ID=prot_H-elongata_contig197351.5507.1|Name=mRNA_H-elongata_contig197351.5507.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=258bp
MRQIPYREIVGALMWAAMMTRPDISFAAHQLAKFNDNPGPTHWRAAQKAL
QYLLRTRDLGITYGGEPXXXXFVGPGGARGSRGGAGGGGGGGLSAWVDAD
YGTCPDTRCSVSGGAVVMAGGAISWFSRVQKVTATASSESEYVALDEMVN
ELRFLRQVKEFMTPPQSTSPSRYARTMKVQLRWRKKRFSSRRTRHVDIKH
HIVRDAIGGGVVHVEYVRSGEQHADILTKSVDVSTFEKHARSLLNHSMKV
SGGVEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like