prot_H-elongata_contig19711.5500.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19711.5500.1
Unique Nameprot_H-elongata_contig19711.5500.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length731
Homology
BLAST of mRNA_H-elongata_contig19711.5500.1 vs. uniprot
Match: D7FX89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX89_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 9.010e-110
Identity = 291/775 (37.55%), Postives = 360/775 (46.45%), Query Frame = 0
Query:   20 QPASDRALRFRGKYDFKRGRGLAGPLSVNDPQFARRHSN-FKPLPSDSYFTLSSPFGMCGARRGWRMRQRDAPQHVHRLLRAFVAAHDYAGAARALATLHRLHTAFDPDVYRYTTVLLRLAGEHQQMTMYFRKIIAK---------KSRSVLKKSSLQGRVVAHDFLGYLADRRDYGKALSASQSLLQGTGHVNSSSFRDDSMLKAHGAILRLFVGLLEHE---NAQFFAGGADREASPSAP-----------------IPNLQDPLALMKRLRECGIGYCSGGAADLKIDGGVKARALSHLRQAKKLFGQAVPPXXXXRPGTIWDQVYGADPPWTPTDFQRTEGFGSGGGQRMGR-GIEWVWAEGVVQ-------------GAPAPHPLVRGVDQEVWEEILLDPSADPFLEEAEGAMKGGPGRGNQGGGETWCSDDEDCVLGSEPETLRKG--ARLASRRTGGCVYYSPP--------------GEDGDVAAWGAGERSQWKAKSVVESSDAKSGGASAEKVTALPRTSTGKGDYAV-PEIVSQKLGGLKRRGRLRGDIGAGDSSLEGDYGLVKEENVRDFTSASPEDQGHRDGVFRQGSVDTGSANRR---GAPAEERRKGVSESSDVLEFRSKKRRKIASALRDSQYGESDVYSSGADGESDANPTTAAAAAAYGGGVNGEGGDFHSAPSLFEDEAPLGPPAG-ADPAVLELSETLSVQLPEEAALRLLASKICVAAHVFGPQHRYCLRAIGRLCQDNVRDIAHPTREALR 729
            QPAS      RG YD  R +GLAGPLSVNDPQ     ++  +   S+S+F ++SPFG  GA   W + +RDAP+HVH LLRAF+AAHDYAGAARALATLHRLH+ FDPDVYRYT  LLRLAG+HQ+ +MYFRKI+ K         K  SV  + S++GR  AHDFL YLADR+++ +AL  SQ+LLQG   ++   F+ D  LKAHGA+LRLFV LLEH+        + G+       AP                 IP LQDPL+L+ RLR C I   +G           +ARAL HLR             XXXRPGTI D +YGADPPW PTDF    G G G G   GR G+                       G+ +PHPL+RGVD E+WEE +LDP A+P L  A G  +GG GRG  GG   WCS                   ARLASR TGGCVY+S                GE+   A      R   +  +V         G   E +     T +  GD+A  P    +++     RGRLR   G GD+                                                GA  E    G +  S        KRR + S                                        E  D+                 G A P   +L +    +  ++ A  LLA K CVAAH+FGPQHRYCLRAIGRLC+++VR+ A P R ALR
Sbjct:   47 QPASSS---LRGTYDVNR-KGLAGPLSVNDPQLLEPPTHRLRFTNSESFFNIASPFGPPGASNTWSLSRRDAPEHVHLLLRAFMAAHDYAGAARALATLHRLHSLFDPDVYRYTVALLRLAGDHQKTSMYFRKILGKRLLAGVFAPKGGSV--QGSVRGRATAHDFLAYLADRQEFDEALDISQNLLQGGSFLSHGPFKQDPSLKAHGAVLRLFVALLEHQVCSGRNDTSDGSSSATDAPAPXXXXXXXXXXXXXXXXLIPGLQDPLSLVGRLRACWIDCAAGAXXXXXXXXXRQARALEHLRDKSTAXXXXX---XXXRPGTIRDHLYGADPPWAPTDFAAARGRGVGSGLADGRAGVXXXXXXXXXXXXXXXXSGGLSALGSYSPHPLLRGVDAELWEETVLDPGAEPLLL-APG--RGGGGRGQDGG--IWCSXXXXXXXXXXXXXXXXXXXARLASRGTGGCVYFSXXXXXXXXXXXXXXXXGEERGAART-CSRRPFLETMTVA--------GIVLEGMAETQATGSEGGDHARDPGATEREVEDGIGRGRLR--QGGGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASEEXXXSGGAPGSSGRGRNRSKRRDLES----------------------------------------EDDDYEPXXXXXXXXXXXXXTTGVAQPRAGKL-KLEQEEGDQDTAAWLLADKCCVAAHLFGPQHRYCLRAIGRLCREDVREAARPARAALR 755          
BLAST of mRNA_H-elongata_contig19711.5500.1 vs. uniprot
Match: A0A6H5KZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ4_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 7.470e-95
Identity = 315/1008 (31.25%), Postives = 385/1008 (38.19%), Query Frame = 0
Query:   29 FRGKYDFKRGRGLAGPLSVNDPQFARRHSN-FKPLPSDSYFTLSSPFGMCGARRGWRMRQRDAPQHVHRLLRAFVAAHDYAGAARALATLHRLHTAFDPDVYRYTTVLLRLAGEHQQMTMYFRKIIAK---------KSRSVLKKSSLQGRVVAHDFLGYLADRRDYGKALSASQSLLQGTGHVNSSSFRDDSMLKAHGAILRLFVGLLEHEN--------------AQFFAGGADREAS------PSAPIPNLQDPLALMKRLRECGIGYCSGGAADLKIDGGVKARALSHLRQAKKLFGQA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VP---------------------PXXXXRPGTIWDQVYGADPPWTPTDFQRTEG--FGSG------------GGQRMGRGIEWVWAEGVVQGAPAPHPLVRGVDQEVWEEILLDPSADPFLEEAEGAMKGGPGRGNQGGGETWCSDDEDCVLGSEPETL--RKGARLASRRTGGCVYYSPPGEDGDVAAWGAGERSQWKAKSVVES-----SDAKSGGASAEKVTALPRTSTGKGDYAV-PE--IVSQKLGGLKRRGRLRGDIGAGDSSLEGDYGLVKEENVRDFTSASPEDQGHRDGVFRQGSVDTGSANRRGAPAEERRKGVSESSDVLEFRSKKRRKIASALRDSQYGESDVYSSGADGESDANPTTAAAAAAYGGGVNGEGGD--FHSAPSLFEDEAPLGPPAGADPAVLELSETLSVQLPEEAALRLLASKICVAAHVFGPQHRYCLRAIGRLCQDNVRDIAHPTREALR 729
             RG YD  R +GLAGPLSVNDPQ     ++  +   S+S+F ++SPFG  GA   W + +RDAP+HVH LLRA +AAHDYAGAARALATLHRLH+ FDPDVYRYT  LLRLAG+HQ+ +MYFRKI+ K         K  SV  + S++GR  AHDFL YLADR+++ +AL  SQ    G   ++   F+ D  LKAHGA+LRLFV LLEH+               A F A  A   A+      P   IP LQDPL+L+ RLR C +  C GG       G  +ARAL HLR A++L  QA                                                                                                                                                                                                                                      VP                      XXXXRPGTIWD +YGADPPW PTDF    G   GSG            GGQ MG G           G+ +PHPL+RGVD E+WEE +LDP A+P L +  G + G   RG  G    WCSDDEDC           ++ ARLASR TGGCVY+SP                + +  +   S           G   E         + +GD+A  PE                                                     R G   +           GAP                  S  R +  S  RD +  E D Y   + G + + P         G   + E  D  + +AP L E EAPLGPP G D A   LSET+SV+LP EAA  LLA K CVAAH+FGPQHRYCLRAIGRLC+++VR+ A P R  LR
Sbjct:   53 LRGTYDVNR-KGLAGPLSVNDPQLLEPPTHRVRFTNSESFFNIASPFGPPGASNTWSLSRRDAPEHVHLLLRALMAAHDYAGAARALATLHRLHSLFDPDVYRYTVALLRLAGDHQKTSMYFRKILGKRLLAGVFAPKGGSV--QGSVRGRATAHDFLAYLADRQEFDEALDLSQ----GGSFLSHGPFKQDPSLKAHGAVLRLFVALLEHQACSGCSYTSDGSSCAADFPAPSAGNAAAVSGRQRPPPLIPGLQDPLSLVGRLRACWVD-CGGGGHG----GSRQARALEHLRYAQRLLEQAATGSPGDASIAGYRAAATAASAASEGGGMPAALRQLAAFVERNPGSVKGHRLHARLLEMSRREAQXXXXXXXXXXXXXRLSLPQEEGRRDRGQGEGRDAIGGAGAQQAGAEKKAAGTAEEEDQDGLLLVGVARARALRGWLEADPLEPRAVLALAALHAEGSAAVVGVADRAFVVDGLVAQLETSCGGGPRPCPAPAVDARGTLHTTRAATTLWTALADLLGPLRVRDEPVPVVRQSGXXXXXXXXXXXXXXXXXXXXRPGTIWDHLYGADPPWAPTDFVAARGRVVGSGLADGRAGVGGVLGGQAMGEGGGGDRGGLSALGSYSPHPLLRGVDAELWEETVLDPDAEPLLLDPGGGVGG---RGQDGC--IWCSDDEDCXXXXXXXXXXXQERARLASRGTGGCVYFSPXXXXXXXXXXXXXXXXEERGAARTNSRRPFFETMTVAGIVLEGTAETQAAGSEEGDHARNPEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQGASAEXXXXXXXXXXXGAPG-----------------SSGRGRNRSNRRDLE-SEDDDYEPESPGVARSRPANLKVEHDDGDQESEEEADEDYMTAPGLREAEAPLGPPTGTDAAATRLSETVSVKLPGEAAAWLLADKCCVAAHMFGPQHRYCLRAIGRLCREDVRETARPARAVLR 1025          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19711.5500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX89_ECTSI9.010e-11037.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZZ4_9PHAE7.470e-9531.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19711contigH-elongata_contig19711:1357..6348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19711.5500.1mRNA_H-elongata_contig19711.5500.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19711 1357..6348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19711.5500.1 ID=prot_H-elongata_contig19711.5500.1|Name=mRNA_H-elongata_contig19711.5500.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=731bp
DDEIDPAVKQELSQEGPGEQPASDRALRFRGKYDFKRGRGLAGPLSVNDP
QFARRHSNFKPLPSDSYFTLSSPFGMCGARRGWRMRQRDAPQHVHRLLRA
FVAAHDYAGAARALATLHRLHTAFDPDVYRYTTVLLRLAGEHQQMTMYFR
KIIAKKSRSVLKKSSLQGRVVAHDFLGYLADRRDYGKALSASQSLLQGTG
HVNSSSFRDDSMLKAHGAILRLFVGLLEHENAQFFAGGADREASPSAPIP
NLQDPLALMKRLRECGIGYCSGGAADLKIDGGVKARALSHLRQAKKLFGQ
AVPPPPPPRPGTIWDQVYGADPPWTPTDFQRTEGFGSGGGQRMGRGIEWV
WAEGVVQGAPAPHPLVRGVDQEVWEEILLDPSADPFLEEAEGAMKGGPGR
GNQGGGETWCSDDEDCVLGSEPETLRKGARLASRRTGGCVYYSPPGEDGD
VAAWGAGERSQWKAKSVVESSDAKSGGASAEKVTALPRTSTGKGDYAVPE
IVSQKLGGLKRRGRLRGDIGAGDSSLEGDYGLVKEENVRDFTSASPEDQG
HRDGVFRQGSVDTGSANRRGAPAEERRKGVSESSDVLEFRSKKRRKIASA
LRDSQYGESDVYSSGADGESDANPTTAAAAAAYGGGVNGEGGDFHSAPSL
FEDEAPLGPPAGADPAVLELSETLSVQLPEEAALRLLASKICVAAHVFGP
QHRYCLRAIGRLCQDNVRDIAHPTREALRR*
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