prot_H-elongata_contig197043.5496.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197043.5496.1
Unique Nameprot_H-elongata_contig197043.5496.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: D8LIP8_ECTSI (RING-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIP8_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 9.470e-11
Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +GRS+CV+WNGVHHKTN +GGS+ FGYPD  YF R
Sbjct:  372 TGRSNCVIWNGVHHKTNTTGGSSSFGYPDPGYFGR 406          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A2A9MLR5_9APIC (RING-type E3 ubiquitin transferase n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MLR5_9APIC)

HSP 1 Score: 61.2 bits (147), Expect = 8.520e-10
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +GRSD VVWNG+HHKTN SGG  ++GYPD  YF R
Sbjct:  440 TGRSDVVVWNGIHHKTNRSGGPTVYGYPDDSYFDR 474          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: B9PZT1_TOXGV (RING-type E3 ubiquitin transferase n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=B9PZT1_TOXGV)

HSP 1 Score: 58.9 bits (141), Expect = 5.560e-9
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +GRSD VVWNG+HHKTN SGG   +GYPD  YF R
Sbjct:  424 TGRSDVVVWNGIHHKTNRSGGPTGYGYPDASYFDR 458          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A7S1CPA8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPA8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.590e-9
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +GRSDCV+WNGVHHKT+ +GG   FGYPD  Y  R
Sbjct:  358 TGRSDCVIWNGVHHKTSKTGGPQSFGYPDPAYLAR 392          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A3P7JJE5_STRVU (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7JJE5_STRVU)

HSP 1 Score: 53.9 bits (128), Expect = 1.490e-8
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +G  + VVWN +HHKTN+SGG   FGYPD DY  R
Sbjct:    7 TGARNTVVWNNIHHKTNISGGPQKFGYPDPDYLNR 41          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A7R9WB62_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB62_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.560e-8
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +G+ DCVVWNG+HHKT+VSGG   +GYPD  Y  R
Sbjct:   70 TGKDDCVVWNGIHHKTSVSGGP--YGYPDETYLAR 102          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A0V0QH40_PSEPJ (RING-type E3 ubiquitin transferase n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QH40_PSEPJ)

HSP 1 Score: 57.4 bits (137), Expect = 1.940e-8
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +G+ +  VWNGVHHKTN SGG A FGYPD  YF R
Sbjct:  300 TGQDNTTVWNGVHHKTNTSGGPAYFGYPDPTYFNR 334          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: F0Y4T2_AURAN (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4T2_AURAN)

HSP 1 Score: 54.7 bits (130), Expect = 4.120e-8
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +GRSDCVVW G+HHKT  +GG+A  GYPD  Y  R
Sbjct:  101 TGRSDCVVWAGIHHKTQRTGGAAEHGYPDATYLDR 135          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A078BBQ5_STYLE (RING-type E3 ubiquitin transferase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BBQ5_STYLE)

HSP 1 Score: 55.8 bits (133), Expect = 5.700e-8
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +G S+CVVW G+HHKT+ +GG++ FGYPD  YF R
Sbjct:  212 TGASNCVVWQGIHHKTSPTGGTSSFGYPDPTYFER 246          
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Match: A0A835ZAV4_9STRA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.800e-8
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    8 SGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR 42
            +G  +CV+WNGVHHKT  +GG   FGYPD  YF R
Sbjct:  101 TGIPNCVIWNGVHHKTRTNGGVQAFGYPDPTYFER 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197043.5496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP8_ECTSI9.470e-1171.43RING-type E3 ubiquitin transferase n=2 Tax=Ectocar... [more]
A0A2A9MLR5_9APIC8.520e-1068.57RING-type E3 ubiquitin transferase n=1 Tax=Besnoit... [more]
B9PZT1_TOXGV5.560e-968.57RING-type E3 ubiquitin transferase n=15 Tax=Toxopl... [more]
A0A7S1CPA8_9STRA7.590e-965.71RING-type E3 ubiquitin transferase n=1 Tax=Bicosoe... [more]
A0A3P7JJE5_STRVU1.490e-860.00E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Str... [more]
A0A7R9WB62_9STRA1.560e-862.86RING-type E3 ubiquitin transferase n=1 Tax=Pseudic... [more]
A0A0V0QH40_PSEPJ1.940e-865.71RING-type E3 ubiquitin transferase n=1 Tax=Pseudoc... [more]
F0Y4T2_AURAN4.120e-862.86RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A078BBQ5_STYLE5.700e-860.00RING-type E3 ubiquitin transferase n=1 Tax=Stylony... [more]
A0A835ZAV4_9STRA5.800e-860.00RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039396Deltex, C-terminalPFAMPF18102DTCcoord: 8..42
e-value: 2.5E-12
score: 47.1
IPR039399Deltex, C-terminal domain superfamilyGENE3D3.30.390.130coord: 1..42
e-value: 3.8E-11
score: 45.2
IPR039398Deltex familyPANTHERPTHR12622DELTEX-RELATEDcoord: 8..42
NoneNo IPR availablePANTHERPTHR12622:SF36coord: 8..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197043contigH-elongata_contig197043:455..583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197043.5496.1mRNA_H-elongata_contig197043.5496.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197043 455..583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197043.5496.1 ID=prot_H-elongata_contig197043.5496.1|Name=mRNA_H-elongata_contig197043.5496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MFRLEWRSGRSDCVVWNGVHHKTNVSGGSAIFGYPDRDYFTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039396Deltex_C
IPR039399Deltex_C_sf
IPR039398Deltex_fam