prot_H-elongata_contig19650.5481.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19650.5481.1
Unique Nameprot_H-elongata_contig19650.5481.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length221
Homology
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: D7FVA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA6_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 1.430e-83
Identity = 129/193 (66.84%), Postives = 154/193 (79.79%), Query Frame = 0
Query:   30 IMSTPVRSFSA--MPQALHRINDQALRRAPMRWDSTKIASLETADETTRLSDLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            ++ST  + F+A  + ++ H+   +++ R  M     + ++LE  D+   L  +A  VFE+D RPVLLYDGVCNMCNGFVNLFLD+D   KFRFSALQSQTGRALL +SGRSP+DISSIVLVE +G AHIQSDALLRMGRLLGGPVGLVL PGV+VPKFVRNKMYD VADNRYS +GKR+ CRCSDERYADRF+
Sbjct:    1 MLSTRGQGFTASHVVRSGHKATPRSVTRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 193          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A836CH16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH16_9STRA)

HSP 1 Score: 166 bits (419), Expect = 7.110e-49
Identity = 78/145 (53.79%), Postives = 110/145 (75.86%), Query Frame = 0
Query:   77 LSDLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLD-EGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            ++D+ R VF  D+RPV+L+DGVCN CN +VN  L LD +G   RF+ LQ   G+ALL  +GR+ +DISSIVLV+  G ++I+SDA+LR+ + LGGP  ++  PG ++P+F R+ +YD+VA+NRYS +GKRE CRCSD +YADRF+
Sbjct:    3 VTDVTREVFSSDKRPVVLFDGVCNFCNTWVNAALQLDPDGKALRFTPLQGDVGKALLQQAGRAADDISSIVLVDEQG-SYIKSDAILRISKALGGPAPVLAAPGFLMPQFARDTLYDLVANNRYSLMGKRETCRCSDPKYADRFI 146          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A250X8I3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8I3_9CHLO)

HSP 1 Score: 166 bits (420), Expect = 5.170e-48
Identity = 80/136 (58.82%), Postives = 100/136 (73.53%), Query Frame = 0
Query:   85 FEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            F  DRRPV+LYDGVCN+CNG VNL LDLD   +FR +ALQS  GR LL   GR P+DISSIV+VE  G  HI+SDA+LR+ + L  P  L    GV VP F+R+ +YD+VADNRYS LGKR+ CR  D+R+++RF+
Sbjct:   85 FANDRRPVILYDGVCNLCNGAVNLMLDLDPRGEFRMAALQSPAGRRLLQTCGRQPDDISSIVVVERGGKHHIKSDAILRIAQGLSNPFPLFALFGVPVPPFLRDSLYDLVADNRYSILGKRDVCRLKDDRFSERFI 220          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A7S0HUG9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUG9_9CRYP)

HSP 1 Score: 152 bits (385), Expect = 1.200e-42
Identity = 81/155 (52.26%), Postives = 110/155 (70.97%), Query Frame = 0
Query:   79 DLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAK----FRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGV---------IVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            ++AR VF++D RPV+LYDGVCN+CNG VN  LD D+ ++    FRF+ALQS+ GRALL   GRSP+DISSIVL   +G+ +++S+A+LR+G+ LG   G +L+P           IVP  VR+  YD +ADNRY+F G  +ECR SDER+ +RFV
Sbjct:   75 EVARKVFDKDSRPVILYDGVCNLCNGGVNFMLDWDKPSEPRGNFRFAALQSEVGRALLRRGGRSPDDISSIVLACEDGNTYVKSEAILRIGKGLGQ--GTILWPLAPVASTTALKIVPSPVRDIFYDFIADNRYNFFGMSDECRLSDERFNNRFV 227          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: L1K1V9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K1V9_GUITC)

HSP 1 Score: 149 bits (376), Expect = 3.160e-42
Identity = 79/148 (53.38%), Postives = 103/148 (69.59%), Query Frame = 0
Query:   79 DLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAK----FRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVL--FPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            ++ R VFE+D RPV+LYDGVCN+CNG VN  LD D   +    FRF+ALQS+ GRALL   GR P+DISSIVL   +G  +++S+A+LR+G++   PV      FPG   P+ VR+  YD VADNRY+F G  +ECR SDER+ +RFV
Sbjct:    8 EIVRKVFEKDSRPVILYDGVCNLCNGGVNFMLDWDNPTQLRGNFRFAALQSEVGRALLQRGGRRPDDISSIVLACEDGKTYVKSEAILRIGKVCNQPVRFPSDSFPGPW-PRNVRDVFYDFVADNRYNFFGISDECRLSDERFDNRFV 154          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A383WGK0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGK0_TETOB)

HSP 1 Score: 149 bits (375), Expect = 3.410e-41
Identity = 80/162 (49.38%), Postives = 109/162 (67.28%), Query Frame = 0
Query:   59 RWDSTKIASLETADETTRLSDLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            R  ST+ A+     +    +  A   F  D+RPV+L+DGVCNMCNG VN  LD D+   +RF+ALQS  GR LL   GR+P+DISSIVLVE +   +I+S+A+LR+   LG P+ L+    ++VPKFV + +YD VA+NRYSF GK + CR SD+ +ADRF+
Sbjct:   64 RASSTEQAAAPAVSQPAAAAVQAVDYFAIDKRPVVLFDGVCNMCNGGVNFMLDWDKEGVYRFAALQSTPGRQLLTRCGRAPDDISSIVLVEES-RCYIKSEAVLRIALRLGMPLPLLAGLALLVPKFVGDPVYDQVANNRYSFFGKSDSCRVSDDGFADRFL 224          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A7S0XHX8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XHX8_9CHLO)

HSP 1 Score: 147 bits (371), Expect = 9.420e-41
Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 0
Query:   71 ADETTRLSDLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFP-----GVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            A  T   S   +  F  D+RP++L+DGVCN+CNG VNL LDLD   K RF+ALQS  GR LL  +GR P DISSIVLVE N +A+ +SDA+LR+   L  P    L P     G +VP+F+R+ +YD VADNRY  LG ++ CR  D+R+ +RFV
Sbjct:   63 ATSTASTSPANKDFFATDKRPIILFDGVCNLCNGGVNLALDLDPPGKLRFAALQSDAGRQLLVRAGRDPTDISSIVLVEEN-NAYTKSDAVLRIATYLENP----LLPAAGALGPLVPQFLRDAVYDAVADNRYELLGIQDSCRLGDDRFDERFV 212          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A1Y1IS12_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IS12_KLENI)

HSP 1 Score: 145 bits (367), Expect = 1.930e-40
Identity = 74/142 (52.11%), Postives = 97/142 (68.31%), Query Frame = 0
Query:   79 DLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            D   V F +D+RPV+L+DGVCN+CN  VN  LD D     RFSALQS+ GRALL  +GR P DI+SIVLVE N   +I+S+A+L + + L  P+      G+IVP F R+K Y+++A NRYS +GKR  CR  D+R+ DRFV
Sbjct:   49 DPGDVYFAKDKRPVILFDGVCNLCNNGVNFMLDHDPKGNLRFSALQSEAGRALLRRAGRDPQDITSIVLVEPN-KCYIRSEAILHIAQYLHQPLIAFGHLGLIVPGFFRDKFYNLIAYNRYSIMGKRNMCRIGDQRFVDRFV 189          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A7S2UZ94_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ94_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.790e-40
Identity = 79/166 (47.59%), Postives = 110/166 (66.27%), Query Frame = 0
Query:   61 DSTKIASLETADETTRLSDLARVVFEEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGD------AHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            DST +  L T  +  +    A  VFE D RPV+L+DGVCNMCNG VNL LD D+  KFR++ALQS+TG+ALL  +GR+P+DIS+IVLVE          A+I+++A+ R+   L  P+ L+ F    VP+ V +  YD +A NRY  LG+++ CR SD+R+ DRF+
Sbjct:   62 DSTALKGL-TTKQLNKYYSKAEAVFETDSRPVILFDGVCNMCNGGVNLALDWDKVGKFRYAALQSETGKALLVKAGRAPDDISTIVLVEGPAGKQEGWRAYIKAEAVRRISAGLRAPLPLIAFAVRPVPRPVLDVAYDFIAANRYRILGRKDVCRLSDDRFEDRFL 226          
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Match: A0A7S2B0P4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0P4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.060e-40
Identity = 76/150 (50.67%), Postives = 100/150 (66.67%), Query Frame = 0
Query:   72 DETTRLSDLARVVF-EEDRRPVLLYDGVCNMCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEANGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYSFLGKREECRCSDERYADRFV 220
            ++T      A  +F E+D RPV+L+DGVCNMCNG VN  LD D    FRF+ALQS TGRALL  +GR P+DISSIVLV+ +  A+I+SDA+LR+ R L  P   +   G+  PK  R+  YDV+A NRY   G+ + CR SD+R+  RF+
Sbjct:   65 EDTVAWQSRADAIFSEKDSRPVILFDGVCNMCNGGVNFALDWDPDGNFRFAALQSPTGRALLRRAGREPDDISSIVLVDDSA-AYIKSDAILRIARKLNLPFPFLGSAGLFFPKLPRDVFYDVIAQNRYRVFGRSQSCRLSDDRFEARFI 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19650.5481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA6_ECTSI1.430e-8366.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CH16_9STRA7.110e-4953.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A250X8I3_9CHLO5.170e-4858.82Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S0HUG9_9CRYP1.200e-4252.26Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1K1V9_GUITC3.160e-4253.38Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A383WGK0_TETOB3.410e-4149.38Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S0XHX8_9CHLO9.420e-4150.97Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A1Y1IS12_KLENI1.930e-4052.11Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7S2UZ94_9STRA2.790e-4047.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2B0P4_9STRA3.060e-4050.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007263Protein of unknown function DUF393PFAMPF04134DUF393coord: 93..204
e-value: 1.2E-23
score: 84.6
NoneNo IPR availablePANTHERPTHR33639:SF2coord: 54..220
NoneNo IPR availablePANTHERPTHR33639FAMILY NOT NAMEDcoord: 54..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19650contigH-elongata_contig19650:1114..3329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19650.5481.1mRNA_H-elongata_contig19650.5481.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19650 1007..4233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19650.5481.1 ID=prot_H-elongata_contig19650.5481.1|Name=mRNA_H-elongata_contig19650.5481.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=221bp
MVCRGVIVVIRRPFPRNPLAVLALLSAFAIMSTPVRSFSAMPQALHRIND
QALRRAPMRWDSTKIASLETADETTRLSDLARVVFEEDRRPVLLYDGVCN
MCNGFVNLFLDLDEGAKFRFSALQSQTGRALLGMSGRSPNDISSIVLVEA
NGDAHIQSDALLRMGRLLGGPVGLVLFPGVIVPKFVRNKMYDVVADNRYS
FLGKREECRCSDERYADRFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007263DUF393