prot_H-elongata_contig106621.544.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106621.544.1
Unique Nameprot_H-elongata_contig106621.544.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A6H5KK26_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK26_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.210e-103
Identity = 168/217 (77.42%), Postives = 183/217 (84.33%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEV-----------------SSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQV +SGFRSFR+Q EIE FSPRHNVIVGRNGSGKSNFFDAIQF LLNQRFS+LRQEERQ+LLHEGAG  +  AYVE++FDN+DGRLAQDGDEV LRR+IG+KKDEFFL+ KRVTKQEV                 SSLLESAGFSK+NPYYIVQQGKVS LTLMKDAERLNLLKEVAGTKVYEERRQESL+IMD L NK EKIQ VI+ +E R
Sbjct:    1 MHIKQVSMSGFRSFRSQPEIESFSPRHNVIVGRNGSGKSNFFDAIQFALLNQRFSNLRQEERQLLLHEGAGAKLMSAYVEIVFDNSDGRLAQDGDEVVLRRNIGMKKDEFFLNLKRVTKQEVGGKEEEFDRGVIGALKVSSLLESAGFSKANPYYIVQQGKVSALTLMKDAERLNLLKEVAGTKVYEERRQESLKIMDELNNKFEKIQEVISFIEER 217          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: D8LEU4_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU4_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 4.210e-98
Identity = 168/200 (84.00%), Postives = 183/200 (91.50%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQV +SGFRSFR+Q EIE FSPRHNVIVGRNGSGKSNFFDAIQF LLNQRFS+LRQEERQ+LLHEGAG  +  AYVE++FDN+DGRLAQDGDEV LRR+IG+KKDEFFL+ KRVTKQEVSSLLESAGFSK+NPYYIVQQGKVS LTLMKDAERLNLLKEVAGTKVYEERRQESL+IMD L NK EKIQ VI+ +E R
Sbjct:    1 MHIKQVSMSGFRSFRSQPEIESFSPRHNVIVGRNGSGKSNFFDAIQFALLNQRFSNLRQEERQLLLHEGAGAKLMSAYVEIVFDNSDGRLAQDGDEVVLRRNIGMKKDEFFLNLKRVTKQEVSSLLESAGFSKANPYYIVQQGKVSALTLMKDAERLNLLKEVAGTKVYEERRQESLKIMDELNNKFEKIQEVISFIEER 200          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A7S2F438_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F438_9STRA)

HSP 1 Score: 289 bits (739), Expect = 3.550e-92
Identity = 152/200 (76.00%), Postives = 173/200 (86.50%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQ+ +SGFRSFR+QSEIEPFS +HNVIVGRNGSGKSNFFDAIQFVL++ RF++LRQEERQ LLHEGAG +V  AYVE+IFDN+D R+  DGDEV LRR IGLKKDEFFL+ KRVTK EVSSLLESAGFSKSNPYYIVQQGKV+ L LMKD ERL LLKEV GT+VYEERR+ESL+I+    +K EKIQ VI+ +E R
Sbjct:   21 MHIKQLTLSGFRSFRSQSEIEPFSSKHNVIVGRNGSGKSNFFDAIQFVLVSSRFNTLRQEERQHLLHEGAGANVMAAYVEIIFDNSDARMTVDGDEVVLRRTIGLKKDEFFLNRKRVTKSEVSSLLESAGFSKSNPYYIVQQGKVNALCLMKDQERLQLLKEVGGTRVYEERREESLKIISETTSKREKIQEVISYIEKR 220          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A836CH46_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH46_9STRA)

HSP 1 Score: 300 bits (768), Expect = 4.740e-91
Identity = 158/200 (79.00%), Postives = 175/200 (87.50%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQV+ISGFRSFR+Q+E EPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQ+F +LRQEERQ LLHEGAG +V  A+VE++FDN+DGRL  DGDEV LRR IGLKKDEFFL+ KRVTK +VSSLLESAGFSKSNPYYIVQQGKVS LT+M D ERLNLLKEVAGTKVYEERR ESL+IM    +K  +IQ VIT +E R
Sbjct:    1 MHIKQVIISGFRSFRSQAETEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQKFQNLRQEERQHLLHEGAGANVMSAFVEIVFDNSDGRLPVDGDEVVLRRTIGLKKDEFFLNRKRVTKADVSSLLESAGFSKSNPYYIVQQGKVSALTMMHDTERLNLLKEVAGTKVYEERRAESLKIMSDTADKRARIQEVITYIEDR 200          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A7R9U6Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Y3_9STRA)

HSP 1 Score: 290 bits (742), Expect = 2.270e-89
Identity = 153/200 (76.50%), Postives = 172/200 (86.00%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQ++ISGFRSFRTQ EIEPFSP HNVIVGRNGSGKSNFFDAIQFVLL  RF+SLRQEERQ LLHEGAG +V  A+VELIFDN+DGR+A DGDE+ LRR +GLKKDEFFL+ +RV K EV SLLESAGFSKSNPYYIV+QGKV+ L LMKD ERLNLLKEVAGTKVYEERR+ES +I+     K EKI+ VI+ +E R
Sbjct:    1 MHIKQIIISGFRSFRTQDEIEPFSPSHNVIVGRNGSGKSNFFDAIQFVLLAPRFASLRQEERQHLLHEGAGQNVMSAFVELIFDNSDGRIAVDGDEIVLRRTVGLKKDEFFLNRRRVRKGEVESLLESAGFSKSNPYYIVEQGKVNALCLMKDTERLNLLKEVAGTKVYEERREESNRIILETTEKREKIEEVISYIEER 200          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: W7T3Q8_9STRA (Structural maintenance of chromosomes protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3Q8_9STRA)

HSP 1 Score: 289 bits (740), Expect = 3.020e-87
Identity = 153/200 (76.50%), Postives = 175/200 (87.50%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQVV+SGFRSFR QSEIEPFS RHNVI+GRNGSGKSNFF AIQFVLL+Q+F  LRQEERQ LLHEGAG +V  A+VE+IFDN+DGR+  +GDEV LRR IG+KKDEFFL+ KRVTKQEVSSLLESAGFS+SNPYYIVQQGKV+ LTLM+D +RL+LLKEVAGTKVYEERR ESLQI+    +K EKIQ V++ +E R
Sbjct:    1 MHIKQVVLSGFRSFRHQSEIEPFSARHNVIIGRNGSGKSNFFAAIQFVLLSQKFMHLRQEERQQLLHEGAGANVMTAFVEVIFDNSDGRMTVEGDEVVLRRTIGVKKDEFFLNRKRVTKQEVSSLLESAGFSRSNPYYIVQQGKVNMLTLMRDDQRLDLLKEVAGTKVYEERRAESLQIIHETDHKREKIQEVVSYIEER 200          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A7S1U8S3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S3_9STRA)

HSP 1 Score: 282 bits (722), Expect = 6.660e-85
Identity = 145/195 (74.36%), Postives = 168/195 (86.15%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVIT 195
            M I+Q+++SGFRSFR Q EIEPFSP HNV+VGRNGSGKSNFFDAIQFVLL  +F++LRQ+ERQ LLHEGAG +V  A+VE+IFDN DGR+A DGDE+ LRR +GLKKDEFFL+ +RVTK EV SLLESAGFSKSNPYYIVQQGKV+ L LMKD+ERLNLLKEVAGTKVYEERR ES +I++    K EKIQ VI+
Sbjct:    1 MRIQQIILSGFRSFRQQEEIEPFSPHHNVVVGRNGSGKSNFFDAIQFVLLAPKFANLRQDERQRLLHEGAGQNVMSAFVEIIFDNADGRIAVDGDEIVLRRTVGLKKDEFFLNRRRVTKGEVGSLLESAGFSKSNPYYIVQQGKVNALCLMKDSERLNLLKEVAGTKVYEERRAESTKIIEETNEKREKIQEVIS 195          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A2P4X866_9STRA (Chromosome segregation protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X866_9STRA)

HSP 1 Score: 254 bits (649), Expect = 5.270e-83
Identity = 128/200 (64.00%), Postives = 161/200 (80.50%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIKQV++ GFRS++ Q  + PFS  HNV++GRNG+GKSNFFDAI+F LL  RF+SLR +ERQ LLHEG+G HV  AYVE+IFDN+DGRL  D  EV LRR IG+KKDEFFL+ K +TK +V  LLESAGFS+SNPYYIVQQGKV+ L +M++ ERL LLKEVAGTKVYE++R +SL+I+   + + EKIQ V++ +E R
Sbjct:    1 MHIKQVIVCGFRSYKDQVAVTPFSKEHNVVIGRNGTGKSNFFDAIRFGLLTSRFASLRPDERQALLHEGSGKHVMSAYVEIIFDNSDGRLPVDDVEVALRRTIGVKKDEFFLNRKHITKSDVVHLLESAGFSRSNPYYIVQQGKVNALAVMRERERLELLKEVAGTKVYEDQRVKSLKILQDTQTQREKIQEVVSYIETR 200          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A397B2P4_9STRA (SMC_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B2P4_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.000e-79
Identity = 130/200 (65.00%), Postives = 160/200 (80.00%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIK VV+ GFRS++ ++ +E FS   NV++GRNG+GKSN FDAI+F LL +RFS+LRQEERQ LLHEGAG HV  AYVE+ F N DGRL  D ++V LRR IG+KKDEFFL+ K +TKQ+V+ LLESAGFS+SNPYYIVQQGKV+ L LMKD ERL LLK+VAGTKVYE+RR ESL+I+   + + EKI  VI+ +E R
Sbjct:    1 MHIKSVVVCGFRSYKEEAVVESFSKGQNVVIGRNGTGKSNMFDAIRFGLLTERFSNLRQEERQGLLHEGAGKHVMSAYVEITFCNRDGRLPLDTEDVVLRRTIGVKKDEFFLNRKHITKQDVNHLLESAGFSRSNPYYIVQQGKVNALALMKDKERLELLKDVAGTKVYEDRRVESLKIIQETQGRREKILEVISYIEGR 200          
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Match: A0A8K1FJ58_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ58_PYTOL)

HSP 1 Score: 263 bits (672), Expect = 4.240e-78
Identity = 135/200 (67.50%), Postives = 163/200 (81.50%), Query Frame = 0
Query:    1 MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLLNQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLRRHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR 200
            MHIK+VV+ GFRS++ Q   +PFS  HNV++GRNG+GKSNFFDAI+F LL  RF++LR EERQ LLHEG+G HV  A+VE++FDN DGRL  D +EV LRR IG+KKDEFFL+ K +TK +V  LLESAGFS+SNPYYIVQQGKV+ L LMK+ ERL LLKEVAGTKVYEERRQESL+IM   +++ EKIQ VIT +E R
Sbjct:    1 MHIKKVVVCGFRSYKDQVVTDPFSKEHNVVIGRNGTGKSNFFDAIRFCLLTSRFANLRPEERQALLHEGSGKHVMSAFVEIVFDNHDGRLPVDTEEVVLRRTIGVKKDEFFLNRKHITKSDVIHLLESAGFSRSNPYYIVQQGKVNALALMKEKERLELLKEVAGTKVYEERRQESLKIMQETQSRREKIQEVITYIEER 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106621.544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK26_9PHAE1.210e-10377.42SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LEU4_ECTSI4.210e-9884.00Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2F438_9STRA3.550e-9276.00Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A836CH46_9STRA4.740e-9179.00Structural maintenance of chromosomes protein n=1 ... [more]
A0A7R9U6Y3_9STRA2.270e-8976.50Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W7T3Q8_9STRA3.020e-8776.50Structural maintenance of chromosomes protein n=2 ... [more]
A0A7S1U8S3_9STRA6.660e-8574.36Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2P4X866_9STRA5.270e-8364.00Chromosome segregation protein (Fragment) n=1 Tax=... [more]
A0A397B2P4_9STRA1.000e-7965.00SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A8K1FJ58_PYTOL4.240e-7867.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 2..133
e-value: 8.7E-36
score: 123.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1..200
e-value: 1.9E-45
score: 157.9
NoneNo IPR availablePANTHERPTHR43977:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 1..200
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 1..200
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106621contigH-elongata_contig106621:524..2080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106621.544.1mRNA_H-elongata_contig106621.544.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106621 524..2080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106621.544.1 ID=prot_H-elongata_contig106621.544.1|Name=mRNA_H-elongata_contig106621.544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MHIKQVVISGFRSFRTQSEIEPFSPRHNVIVGRNGSGKSNFFDAIQFVLL
NQRFSSLRQEERQVLLHEGAGDHVHYAYVELIFDNTDGRLAQDGDEVKLR
RHIGLKKDEFFLSGKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTL
MKDAERLNLLKEVAGTKVYEERRQESLQIMDGLKNKCEKIQAVITGMEVR
ECE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase