mRNA_H-elongata_contig19465.5413.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19465.5413.1
Unique NamemRNA_H-elongata_contig19465.5413.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: D7FMX9_ECTSI (Boron transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX9_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 2.500e-99
Identity = 167/205 (81.46%), Postives = 187/205 (91.22%), Query Frame = 1
Query:    1 LNLVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALRR 615
            + LVEGFG+G+LADIKGKA F  SD TDGF++KVLS++FFLFFACLAPAVAFGG+LGV T GAMGTIEMIAATAVCGMVYAA AGQPLTIIGSTGPVLAFIAVLY+TAAR+++PFLPLYTWVG WTAG+LGV S FSLSN VLFFTRFTDEIFSLLIS+IFIMEATKDI GVF + G+PLV ATSTL+V+LSTY VA+ LK+LRR
Sbjct:  290 IKLVEGFGKGLLADIKGKAPFLKSDITDGFSIKVLSTIFFLFFACLAPAVAFGGMLGVATAGAMGTIEMIAATAVCGMVYAALAGQPLTIIGSTGPVLAFIAVLYKTAARMSLPFLPLYTWVGFWTAGMLGVASAFSLSNMVLFFTRFTDEIFSLLISVIFIMEATKDITGVFASAGVPLVAATSTLVVALSTYGVATILKSLRR 494          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A835YV61_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV61_9STRA)

HSP 1 Score: 246 bits (628), Expect = 6.310e-76
Identity = 133/202 (65.84%), Postives = 160/202 (79.21%), Query Frame = 1
Query:    7 LVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALR 612
            LVEGFG+G+  DIK +A  Y SDFTDG N+K LS+ FFLFFACLAPAVAFGGL+GV T G +GTIEMIAATA CG+VY+  AGQPLTIIGSTGPVLAF AVLY+TA RL +PFLPLY WVGLWT+ LL + SLFSLSN VL+FTRFTDEIF  LIS+IFI EA +D++G++    +PL  A  +  V+ +T+  A+ L+ LR
Sbjct:   27 LVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLR 228          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A7S4D862_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D862_HETAK)

HSP 1 Score: 216 bits (551), Expect = 1.330e-63
Identity = 118/204 (57.84%), Postives = 149/204 (73.04%), Query Frame = 1
Query:    1 LNLVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALR 612
            L +VE F +G+  D K KA +Y SD  DGFNLK LS+V FLFF C+APAVAFGG+L  VT  A+GT+EM+ +T+VCGM+YA  +GQPLTIIGSTGPVLAF  VLYRT A L  PFLP+Y W GLW+AG LG+ ++FSLSN V  FTRFTDE+FSLLIS IF+ EA + +    T   +PL    +TL+++ +TY  A  LK ++
Sbjct:  129 LPVVEKFLKGLKRDAKAKAPYYISDIKDGFNLKTLSAVVFLFFGCIAPAVAFGGVLSKVTNNAIGTMEMLLSTSVCGMIYALLSGQPLTIIGSTGPVLAFTGVLYRTCAALGQPFLPVYAWTGLWSAGYLGLAAVFSLSNIVEGFTRFTDEVFSLLISAIFVAEAVQGVLRALTDPLVPLAQGLATLVLATTTYQTAVKLKGIK 332          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A4D9DEQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEQ9_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.410e-61
Identity = 116/197 (58.88%), Postives = 151/197 (76.65%), Query Frame = 1
Query:   25 RGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALRR 615
            +GI+ D++ KA  Y SDF DG N+K +++ FFLFFACLAPAVAFGGL+G +T G +GT+EM+ ATA  G+ YA F+GQPLTIIGSTGPVLAF  VLYRTA  LA+PFLPLY+WVG+WT+ +L + S+ SLSN V +FTRFTDEIFSLLISLIF+ EA KD++  F    +    A  +L+++++T+  + TL  LRR
Sbjct:  112 KGIVEDVRRKAPHYLSDFKDGANVKGVAATFFLFFACLAPAVAFGGLMGKLTEGNIGTMEMLLATASNGIAYALFSGQPLTIIGSTGPVLAFTLVLYRTAQNLALPFLPLYSWVGIWTSLILFLSSVTSLSNLVNYFTRFTDEIFSLLISLIFLYEAVKDLSSFFINPSVGFAKALLSLVIAVTTFNTSITLAGLRR 308          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A5B8MFK0_9CHLO (Bicarbonate transporter n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MFK0_9CHLO)

HSP 1 Score: 201 bits (512), Expect = 3.100e-58
Identity = 110/205 (53.66%), Postives = 151/205 (73.66%), Query Frame = 1
Query:    1 LNLVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVL-FFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALR 612
            L++VE    G+  D+K +  FY SD+T+G NLK L+S  F+FFACLAPAVAFG LL V T GAMG +EM+ +T++CGMVYA F+GQP+TIIGSTGPVLAF A++Y T  ++A+PFL  Y WVGLWT+G+LG+C++ S SN V+ + TRFTDEIF+ LIS+IF++EA K+I  +    G+    A  +++ ++ST   A +L  LR
Sbjct:   80 LSIVETPFVGLKRDLKQRLPFYVSDYTEGLNLKCLASTLFMFFACLAPAVAFGSLLNVKTQGAMGALEMLVSTSICGMVYALFSGQPVTIIGSTGPVLAFTAIMYSTCQQMALPFLSTYAWVGLWTSGILGLCAVTSTSNLVIRYLTRFTDEIFAGLISVIFVVEAMKNIVSLLFNSGVSSSAALLSIMTAISTCAFALSLAGLR 284          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: B8BQU6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQU6_THAPS)

HSP 1 Score: 195 bits (495), Expect = 4.010e-58
Identity = 107/196 (54.59%), Postives = 138/196 (70.41%), Query Frame = 1
Query:   25 RGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALR 612
            +GI  D K +   Y SD TDG N + L+++ FLFFACLAPAV FG L G  T GA+GT+EM+++TA+CGM+YA  + QPLTIIGSTGPVLAF+A L + A   A+PFLPLY W G+WT+G+L   S+ S SN V + TRFTDEIFS LIS IF++EA ++I   FT           T+IV++STY  A+TL+ LR
Sbjct:   82 KGIARDYKMRLPLYKSDITDGLNTQCLAAICFLFFACLAPAVGFGALFGTATNGAIGTMEMVSSTAMCGMIYALTSAQPLTIIGSTGPVLAFVAALAKLAEVQALPFLPLYAWTGIWTSGILLASSVTSASNLVKYLTRFTDEIFSTLISFIFVVEAVQNIGKSFTNPASSFTKGLMTVIVAVSTYFTANTLRGLR 277          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A7S4PNM8_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PNM8_GUITH)

HSP 1 Score: 201 bits (510), Expect = 5.770e-58
Identity = 113/204 (55.39%), Postives = 146/204 (71.57%), Query Frame = 1
Query:    7 LVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLV--VATSTLIVSLSTYMVASTLKALR 612
            LV GFG G+  D+  ++  Y SD  DG  L+ LS+V FLFFACLAPA+AFGGL+  +TGG +GT+E + +T +CGMVYAAF+GQPLTIIGSTGPVLAF AVLY+ +  + +PFLPLY W GLW++  L + S FS SN V   TRFTDEIFSLLIS IFI EA K+   +F     P    +A+S+LI++ S ++ A++L  LR
Sbjct:   85 LVRGFGEGLREDVSSRSKLYWSDIKDGLKLQTLSTVAFLFFACLAPALAFGGLMSGMTGGNIGTVEYLMSTGICGMVYAAFSGQPLTIIGSTGPVLAFTAVLYQFSLSMGLPFLPLYAWTGLWSSLFLLMGSFFSFSNVVARLTRFTDEIFSLLISFIFIFEAVKESWKLFAVARTPAAFNIASSSLILASSAFLTATSLSKLR 288          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A7S0DU45_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DU45_9CRYP)

HSP 1 Score: 198 bits (503), Expect = 4.090e-57
Identity = 114/204 (55.88%), Postives = 145/204 (71.08%), Query Frame = 1
Query:    7 LVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLV--VATSTLIVSLSTYMVASTLKALR 612
            LV  FG G+  D+  K+  Y SD  DG  L+ LS+V FLFFACLAPA+AFGGL+  +TGG +GT+E + +T VCGM+YAAF+GQPLTIIGSTGPVLAF AVLY+ +  + +PFLPLY W GLW++  L + S FS SN V   TRFTDEIFSLLIS IFI EA K+   +F     P    VA+S+LI++ S ++ A++L  LR
Sbjct:   63 LVRSFGEGLRQDLHTKSKLYWSDIKDGLKLQTLSTVAFLFFACLAPALAFGGLMSGMTGGNIGTVEYLMSTGVCGMIYAAFSGQPLTIIGSTGPVLAFTAVLYQFSLSIGLPFLPLYAWTGLWSSLFLLLGSFFSFSNVVARLTRFTDEIFSLLISFIFIFEAVKESWKLFAIARTPSAFNVASSSLILATSAFLTATSLSKLR 266          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: B7FYF1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYF1_PHATC)

HSP 1 Score: 197 bits (501), Expect = 1.560e-56
Identity = 109/203 (53.69%), Postives = 143/203 (70.44%), Query Frame = 1
Query:    7 LVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALRR 615
            L EG  +GI+ D K +   +ASD  DG N++ L++  FLFFACLAPAV FGGL  V TGGA+GT+EM+++TA+CG++YA  + QPLTIIGSTGPVLAF+A L + A  L +PFL LY+W GLWT+ +L V S+ S SN V + TRFTDEIFSLLIS IF+ EA  D+   F++       A  TL  + ST+ +A+ LK LR+
Sbjct:   90 LFEGPFKGIIRDYKARLPLFASDIKDGLNVQCLAATMFLFFACLAPAVGFGGLFDVATGGAIGTVEMVSSTALCGLIYAITSAQPLTIIGSTGPVLAFVACLAQLAKMLNLPFLQLYSWTGLWTSAILFVSSITSASNLVKYLTRFTDEIFSLLISCIFVFEAVSDVGRTFSSPASTFTKALLTLTCAASTFTIATLLKGLRK 292          
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Match: A0A7S3UGS7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UGS7_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 3.900e-56
Identity = 107/198 (54.04%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   22 GRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAVAFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAFIAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTDEIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTLKALRR 615
            G GI+ D+K KA ++ SDF DG NL+ ++S FFLFF CLAPAVAFGG++ + TGG +G +EMI ATA CG VYA  +GQP+TI+GSTGPVLA  + LY+     ++PFLP+Y WVGLW++G+L +C+L S SNAV   T+FTDE+FS LI+ IFI EA KD   ++        VA  + +VSL+T  VA+TL   RR
Sbjct:   57 GVGIVEDVKRKAPWFTSDFKDGINLRGVASTFFLFFGCLAPAVAFGGMMSLATGGLIGAVEMILATAGCGCVYALTSGQPITIVGSTGPVLALTSALYKMCLTYSLPFLPMYAWVGLWSSGMLMLCALTSTSNAVKLLTKFTDEVFSALIAAIFIAEALKDSLSLYLHAESGAEVALLSTLVSLTTLFVATTLANFRR 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19465.5413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMX9_ECTSI2.500e-9981.46Boron transporter 1 n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YV61_9STRA6.310e-7665.84Bicarbonate transporter n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D862_HETAK1.330e-6357.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9DEQ9_9STRA1.410e-6158.88Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A5B8MFK0_9CHLO3.100e-5853.66Bicarbonate transporter n=2 Tax=Chloropicon primus... [more]
B8BQU6_THAPS4.010e-5854.59Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4PNM8_GUITH5.770e-5855.39Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S0DU45_9CRYP4.090e-5755.88Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
B7FYF1_PHATC1.560e-5653.69Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3UGS7_9CHLO3.900e-5654.04Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19465contigH-elongata_contig19465:688..3698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.9
Seed ortholog evalue5.5e-83
Seed eggNOG ortholog2880.D7FMX9
EggNOG free text desc.inorganic anion exchanger activity
EggNOG OGsKOG1172@1,KOG1172@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons6
Model size618
Cds size618
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19465.5413.1prot_H-elongata_contig19465.5413.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19465 688..3698 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930107.1580336-CDS-H-elongata_contig19465:687..7941622930107.1580336-CDS-H-elongata_contig19465:687..794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 688..794 -
1691679282.9034555-CDS-H-elongata_contig19465:687..7941691679282.9034555-CDS-H-elongata_contig19465:687..794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 688..794 -
1622930107.206052-CDS-H-elongata_contig19465:1585..16951622930107.206052-CDS-H-elongata_contig19465:1585..1695Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 1586..1695 -
1691679282.9184756-CDS-H-elongata_contig19465:1585..16951691679282.9184756-CDS-H-elongata_contig19465:1585..1695Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 1586..1695 -
1622930107.222238-CDS-H-elongata_contig19465:2284..23521622930107.222238-CDS-H-elongata_contig19465:2284..2352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 2285..2352 -
1691679282.928781-CDS-H-elongata_contig19465:2284..23521691679282.928781-CDS-H-elongata_contig19465:2284..2352Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 2285..2352 -
1622930107.2366655-CDS-H-elongata_contig19465:2701..28301622930107.2366655-CDS-H-elongata_contig19465:2701..2830Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 2702..2830 -
1691679282.9374497-CDS-H-elongata_contig19465:2701..28301691679282.9374497-CDS-H-elongata_contig19465:2701..2830Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 2702..2830 -
1622930107.2566473-CDS-H-elongata_contig19465:3038..31431622930107.2566473-CDS-H-elongata_contig19465:3038..3143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 3039..3143 -
1691679282.9464962-CDS-H-elongata_contig19465:3038..31431691679282.9464962-CDS-H-elongata_contig19465:3038..3143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 3039..3143 -
1622930107.2693167-CDS-H-elongata_contig19465:3599..36981622930107.2693167-CDS-H-elongata_contig19465:3599..3698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 3600..3698 -
1691679282.9561288-CDS-H-elongata_contig19465:3599..36981691679282.9561288-CDS-H-elongata_contig19465:3599..3698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19465 3600..3698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19465.5413.1

>prot_H-elongata_contig19465.5413.1 ID=prot_H-elongata_contig19465.5413.1|Name=mRNA_H-elongata_contig19465.5413.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
LNLVEGFGRGILADIKGKAGFYASDFTDGFNLKVLSSVFFLFFACLAPAV
AFGGLLGVVTGGAMGTIEMIAATAVCGMVYAAFAGQPLTIIGSTGPVLAF
IAVLYRTAARLAIPFLPLYTWVGLWTAGLLGVCSLFSLSNAVLFFTRFTD
EIFSLLISLIFIMEATKDIAGVFTTGGIPLVVATSTLIVSLSTYMVASTL
KALRR*
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mRNA from alignment at H-elongata_contig19465:688..3698-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19465.5413.1 ID=mRNA_H-elongata_contig19465.5413.1|Name=mRNA_H-elongata_contig19465.5413.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3011bp|location=Sequence derived from alignment at H-elongata_contig19465:688..3698- (Himanthalia elongata Himel1 dioecious)
CTGAATCTCGTCGAAGGGTTTGGACGAGGTATCCTGGCGGATATCAAGGG GAAGGCGGGGTTCTACGCGTCAGACTTCACCGATGGGTTCAACTTGAAGG TACCTTTTTGCTGGCTGAGGTGTTTGGACTGTTTGCTGTATAAAAGGGTT CAAGCGTTTGCTGTGTATAGCCCCAGGTTTCTTTCCCCTCGCTTAAGCCT TGTTTTTCGATTCTATTTTTTGCTTTTACACGACATTCTGTTTGTTGTTG ATTCTTACATTAGCTCTTTTCCGAAAAGTCTAGGGCCCGTGGTCATAAAA GTGCTGGAGCCTAGGAAAATCCGAAAAACATCCGAGAAATAAAAAAAGGA AAGGGGTACGCAGGACTGAAAGAGGTACACCTAATTTCCTACAGGCACTA TAATCAGTGCACGGTAGTTGGAATAGCATCGATGGTTCAGCGTCTCTCGG TGGATTACATGGAGGCGTTTTTCAGTGGAGGTTACAAGCGCGGAACCTAT CTTTCTCCACACACGAGAATCACGTCGTGTTTTTTTTTAATCTTATATTT TTCAGGTGCTGTCGTCGGTGTTTTTTCTCTTCTTCGCCTGTCTAGCACCT GCTGTGGCTTTCGGGGGCCTGCTAGGCGTCGTAACCGGGGGTGCGATGGG GACCATTGAGGTGAGCAGGCCACTTCCTGGAGGGTGAAAAGCTTGAAGCT TGTTGCGCACCCCCTGTACCCTTCCTAAAGATACAAGTCTAGGCCTGTCA ACGCTTGCTCGGTAAATACCATTGGCCTACCTTTCGCACAGATCTTGCGC GTAGCGTGGAAACACACAAACACAACCCCACTTCTCTTTCGGGGCCACTC GATGCTCGCTCCGGCCAGATGATCGCGGCGACGGCCGTGTGCGGCATGGT CTACGCGGCGTTTGCGGGACAGCCTCTCACCATCATCGGTAGCACCGGAC CCGTGTTGGCCTTCATTGCCGTCCTCTACAGAACCGCCGCCAGGCTGGTG AGAGCCAAGCCGAAGACTCCGATCCCCCTCCTCGTCCCCGAACGTCTCCT AAAGCTGCTGAGCTCTCGATGATTCAGGGGTGGCTTGTTTTTACCTGTTA TATGTTATCTCGAGCGCTGTGTATGCTACAGTGCACGTAGTCTGCACTGT TTATATATACATATGTGCATATACATCGTATTTCGTTGTTCGAGCGGAGT GACAACGCTGACGTTCACGAGGGAGGGGGCTATCCAGCCTTACGTTGGCG CTCTCACCACCCCCTGCCTTTGCCCCTTATCCTGCCCCCCCCCCCTGTTT CCATTTGGCCGCCCGCTCTCTACAAAATCCGGGATGCGCGTCGAAGGCCA TTCCTTTCCTTCCCCTCTACACCTGGGTGGGGTTGTGGACGGCGGGTCTC CTTGGCGTCTGCAGGTGCAAACCTCGAGGCTAGCCTTGTCTCGAGAGCGA GTCCCGCAATTTTATTTAGTTAGTTTTTAGTTCACGCGAGGAAACCAACA ATCAACGTCGTCGAAAAAATAGTTTTGGGCTGTAAACGTGAAGTGTTTGG AAGAGAAAGATAACAGCGCTATTGATAGGGTGTTTTCTGGGGGTCTCTTT CCTCCCCTTAGGTTACGTTCATTAAAAAGCATATCAACTCAATTAAGCCC TCCGAACATCCACGTCTTCTTAGCACCGTGAGAGGTGCAGTTCAGGGTAC CAACTATCGTCAGGTTTATTATATACTGTATACATCATAGCCCATCATTA ATACTGTATACAGCATAGCCCATTATTACATACTGTATACATCATAGCCC ATCATTATATACTGTATACGGCATAGCCCATTATTATATACTGTATACAG CATAGCCCATTATTACATACTGTATACATCATAGCCCATCAATATATACT GTATACATCATAGCCATTATTTGTGGCCAATGCATCGCACTAAAGCGCTT TTGTCCCCTCCCATCGTGTCGTCTCGTCTCCCCCGATTTCGGCATTGTCG TAGCTTGTTCTCTCTATCTAATGCAGTGCTGTTCTTCACCCGCTTCACGG ACGAGATATTCTCGCTCCTTATCTCCTTAATCTTTATTATGGAAGCCACC AAAGACATTGCAGGTATGGATGTCGATGGATATGTCGATGGATATGTCGA TGGATATCATGAGGAAGCAAGAAAGATAAGAAAATATTAAAGTATAAGTA CCAGGAATGTATTATATTATTATTATTATGTTGGTGTTGTTGTTGGTCAT CACATTTAGCAGCACAGTATAGAGTAAGATCAACCGGATTTGGTTGCCTT CTGCTCGTTGTCTGCTGAATAGGGACCCAGGGATAGCTCCCTATAAGCGG GGAGTATTTGCAAACCGGCGTGGCGCCCCCTTACTTACGTGTCTTGTCGG TTTGCGCGGTTTAATGCAAAATTGATAAAAAAGGAAAGTAATTTTCCCTT TCCCGTTCGCGCCCGAGAATCTGGTCTCGCGAGACGGATTCAGCAGTCCC GTCCCGCGTTTTAGATAGTTGATAATTGGGTATTTTTATGAACATTTTAA TTTTAAAACTTTGAACTTATTCCAACCCTCCGAACATCTACACTATATCC TATATACTTCTTAGCACCATGAGAGAGAGGTGCAGTCCAGGGGACTAACT ATCGTCAGGTTCGAATGTGTACATTGCTTGTCCATTTTTTCTTTTTTTTC ATAAAGGCAACGAAGAAAATAATTTTGACCCATGACGTGAAAATAGGGGC GTGGCGTGTTCACATAAGTATATATAGAATTAAGTATTCGTTGTTGTTTC AATTCCTTGTCCTCTTCATTCGTCACTGAGCCGCGCTCTGACCTCCCGAA CTTCCTCCTCCTGTCCTTGATCGGCTGTTGTTGCACCTCGTGACCTTTTA ACAGGCGTTTTTACGACGGGGGGAATTCCCCTTGTCGTGGCGACGTCGAC CCTGATCGTGTCTCTTTCCACCTACATGGTCGCTAGCACCCTCAAGGCTC TGAGAAGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig19465:688..3698-

>mRNA_H-elongata_contig19465.5413.1 ID=mRNA_H-elongata_contig19465.5413.1|Name=mRNA_H-elongata_contig19465.5413.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig19465:688..3698- (Himanthalia elongata Himel1 dioecious)
CTGAATCTCGTCGAAGGGTTTGGACGAGGTATCCTGGCGGATATCAAGGG
GAAGGCGGGGTTCTACGCGTCAGACTTCACCGATGGGTTCAACTTGAAGC
TGAATCTCGTCGAAGGGTTTGGACGAGGTATCCTGGCGGATATCAAGGGG
AAGGCGGGGTTCTACGCGTCAGACTTCACCGATGGGTTCAACTTGAAGGT
GCTGTCGTCGGTGTTTTTTCTCTTCTTCGCCTGTCTAGCACCTGCTGTGG
CTTTCGGGGGCCTGCTAGGCGTCGTAACCGGGGGTGCGATGGGGACCATT
GAGGTGCTGTCGTCGGTGTTTTTTCTCTTCTTCGCCTGTCTAGCACCTGC
TGTGGCTTTCGGGGGCCTGCTAGGCGTCGTAACCGGGGGTGCGATGGGGA
CCATTGAGATGATCGCGGCGACGGCCGTGTGCGGCATGGTCTACGCGGCG
TTTGCGGGACAGCCTCTCACCATCATCGGTAGCACCGGACCCGTGTTGGC
CTTCATTGCCGTCCTCTACAGAACCGCCGCCAGGCTGATGATCGCGGCGA
CGGCCGTGTGCGGCATGGTCTACGCGGCGTTTGCGGGACAGCCTCTCACC
ATCATCGGTAGCACCGGACCCGTGTTGGCCTTCATTGCCGTCCTCTACAG
AACCGCCGCCAGGCTGGCCATTCCTTTCCTTCCCCTCTACACCTGGGTGG
GGTTGTGGACGGCGGGTCTCCTTGGCGTCTGCAGGCCATTCCTTTCCTTC
CCCTCTACACCTGGGTGGGGTTGTGGACGGCGGGTCTCCTTGGCGTCTGC
AGCTTGTTCTCTCTATCTAATGCAGTGCTGTTCTTCACCCGCTTCACGGA
CGAGATATTCTCGCTCCTTATCTCCTTAATCTTTATTATGGAAGCCACCA
AAGACATTGCAGCTTGTTCTCTCTATCTAATGCAGTGCTGTTCTTCACCC
GCTTCACGGACGAGATATTCTCGCTCCTTATCTCCTTAATCTTTATTATG
GAAGCCACCAAAGACATTGCAGGCGTTTTTACGACGGGGGGAATTCCCCT
TGTCGTGGCGACGTCGACCCTGATCGTGTCTCTTTCCACCTACATGGTCG
CTAGCACCCTCAAGGCTCTGAGAAGGTAAGCGTTTTTACGACGGGGGGAA
TTCCCCTTGTCGTGGCGACGTCGACCCTGATCGTGTCTCTTTCCACCTAC
ATGGTCGCTAGCACCCTCAAGGCTCTGAGAAGGTAA
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