mRNA_H-elongata_contig19461.5410.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: D7FWG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG5_ECTSI) HSP 1 Score: 296 bits (759), Expect = 3.490e-96 Identity = 168/314 (53.50%), Postives = 189/314 (60.19%), Query Frame = 1
Query: 1 MEKHGFVVLKDVGAVHHAYVKLVRLLKVFFDGASKRKEKCKGVVHFNERGIPMWHAGYERCGEVREAFRIPA-LLAASRAQPPWPCPTLRDAWVKMLRLLQIVCHRALTLALGHAVSGGPPIAETGNTRKEPSLASARPGDTINIPDCDYEGHCPLGGGG--RHIPPTNEACAIAVNTE------------ASVHEQRRA-DVLCASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGGK 894
ME+HGFVVL + GA+ AY++ + LLK FFDG S KE KG VHFNERGIPMWH GYE+CG VRE FR PA S + PWPCP L AW+ MLRLLQ VCHRALTL LG V G PP K+ + + G ++ D CP+ G P A AV E + H QR A + TGD G D DD+SVSYAL YPN+ ADPALE +DLTVGEHVDPSLFV EPCCGVEGLEI DRASG WLPVEAVCAGLG + G EGRELILFGGK
Sbjct: 1 MERHGFVVLTETGAIRDAYLEFMELLKAFFDGGSGWKEAFKGRVHFNERGIPMWHTGYEKCGIVREVFRAPASAFPPSSQRQPWPCPRLHRAWLAMLRLLQRVCHRALTLTLGRPVLGAPPAKA-----KKSRSTNRQGGASLKAVDGLLCERCPVCGSSLREEQEPEKGNAAAAVRGEKGGGSSTGGMDGGACHRQRFACSAIQDETGD-GCGRDSCDDDSHDDFSVSYALRYPNEFADPALEQEDLTVGEHVDPSLFVAEPCCGVEGLEICDRASGSWLPVEAVCAGLG--SDGGRSLAAAEGRELILFGGK 306
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: A0A836CDG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG4_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.710e-41 Identity = 96/284 (33.80%), Postives = 130/284 (45.77%), Query Frame = 1
Query: 43 VHHAYVKLVRLLKVFFDGASKRKEKCKGVVHFNERGIPMWHAGYERCGEVREAFRIPALLAASRAQPPWPCPTLRDAWVKMLRLLQIVCHRALTLALGHAVSGGPPIAETGNTRKEPSLASARPGDTINIPDCDYEGHCPLGGGGRHIPPTNEACAIAVNTEASVHEQRRADVLCASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGGK 894
V AY+ L+ L+ FFD K +C+G ++FNERG+PMW G+E+CGE+R+AFRI A A ++ WP LR AW+++LR+ + +C RAL+LALG+ V+ PP N+ + D+SV YAL YPN D ++L V EHVDPSLFVVEPCCGV GLE+ D S W+ VEA+C G++L+LFGGK
Sbjct: 94 VESAYLDLIAQLQRFFDAPLDDKLRCRGDIYFNERGVPMWQTGFEKCGEMRQAFRIHAGHADRQS---WPDDALRAAWLRLLRMCERICDRALSLALGYPVT----------------------------------------------PPENKQ--------------------------------------KHDFSVCYALCYPN---DATKYSEELNVTEHVDPSLFVVEPCCGVAGLEVLDTQSRAWVAVEAICR---------------PGKDLVLFGGK 272
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: A0A7S4DAX6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAX6_HETAK) HSP 1 Score: 135 bits (339), Expect = 4.430e-34 Identity = 102/301 (33.89%), Postives = 133/301 (44.19%), Query Frame = 1
Query: 1 MEKHGFVVLKDVGAVHHAYVKLVRLLKVFFDGASKR-KEKCKGVVHFNERGIPMWHAGYERCGEVREAFRIPALLAASRAQPPWPCPT--LRDAWVKMLRLLQIVCHRALTLALGHAVSGGPPIAETGNTRKEPSLASARPGDTINIPDCDYEGHCPLGGGGRHIPPTNEACAIAVNTEASVHEQRRADVLCASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGGK 894
+++HGFVVL D+G V + Y L+ + F + ++ KEK KG V+FNERG+PMW GYER +REA R A AA AQP WP LR+AW K + L + R L L LG AE T KE V E +D++SV YALHYPN D + D+ V EH+DPSLFV+EPC V+GLE+ D+A+ W+ VE +CA GREL++F GK
Sbjct: 47 IQRHGFVVLTDIGIVENNYNALIAEFQNFIENNDRQEKEKLKGPVYFNERGVPMWATGYERM-PMREAVR--ARAAAPHAQP-WPASAGGLREAWEKTTKNLMQIADRCLLLTLG---------AEQALTYKE------------------------------------------------VEE-------------------------DDNFSVCYALHYPN---DESYPDE-FAVTEHIDPSLFVIEPCSNVDGLEVLDQATDTWISVEDLCA---------------PGRELVVFTGK 242
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: M4BI83_HYAAE (2OG-FeII_Oxy domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI83_HYAAE) HSP 1 Score: 74.3 bits (181), Expect = 6.210e-12 Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 538 HEQRRADVLCASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGG 891
H QR D + T G + + D+SV Y LHYPN E ++ V EHVDPSL+VVEP VEGL++ D++S +WL VE VC + G+E++LF G
Sbjct: 97 HMQRICDRALSLT--VGYDVEPSHARSDKDFSVCYGLHYPNSEGSGQSETEN--VFEHVDPSLYVVEPVSRVEGLDVYDQSSKQWLKVEKVC---------------VPGKEIVLFCG 195
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: A0A0P1AJ42_PLAHL (2OG-FeII_Oxy domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ42_PLAHL) HSP 1 Score: 73.9 bits (180), Expect = 2.160e-11 Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 625 DYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGG 891
D+SV Y LHYPN + + + + V EH+DPSL+VVEP VEGL++ D+ + +WL VE+VC + G+E++LFGG
Sbjct: 201 DFSVCYGLHYPN--VEGSGQSETENVFEHIDPSLYVVEPVPSVEGLDVFDQHTKQWLNVESVC---------------VPGKEIVLFGG 272
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: A0A067CH22_SAPPC (2OG-FeII_Oxy domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH22_SAPPC) HSP 1 Score: 73.2 bits (178), Expect = 3.710e-11 Identity = 43/101 (42.57%), Postives = 55/101 (54.46%), Query Frame = 1
Query: 601 VMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGGKVCA 903
V + +D SV Y LHYPNK + ++ V EHVDPSL+V+EP V GL++ D+AS RWL E VC +P E EL+LF GK A
Sbjct: 181 VQRKDEGEDLSVCYGLHYPNKAGTGQSDGEN--VFEHVDPSLYVIEPVTDVRGLDVFDQASQRWLCAEDVC-----------VPHE----ELVLFCGKALA 264
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: D0MZW1_PHYIT (2OG-FeII_Oxy domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZW1_PHYIT) HSP 1 Score: 72.4 bits (176), Expect = 6.910e-11 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 538 HEQRRADVLCASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGG 891
H QR D + T G + + + D+SV Y LHYPN + + + + V EHVDPSL+VVEP VEGL++ D+ S +WL E VC + G+E++LF G
Sbjct: 167 HMQRICDRALSLT--VGYNIEASNARTDKDFSVCYGLHYPN--IEGSGQSKTENVFEHVDPSLYVVEPVPNVEGLDVYDQHSKQWLKAEKVC---------------VPGKEIVLFCG 265
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: W2G4G5_PHYPR (2OG-FeII_Oxy domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2G4G5_PHYPR) HSP 1 Score: 72.4 bits (176), Expect = 7.160e-11 Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 544 QRRADVLC--ASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGG 891
QRR +C A + G + + D+SV Y LHYPN + + + + V EHVDPSLFVVEP VEGL++ D+ S +WL E VC + G+E++LF G
Sbjct: 169 QRRMQRICDRALSLTVGYDIEPSHSRTDKDFSVCYGLHYPN--IEGSGQSETENVFEHVDPSLFVVEPVPNVEGLDVFDQHSKQWLKAEKVC---------------VPGKEIVLFCG 269
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: A0A329SZJ4_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZJ4_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 9.980e-11 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 544 QRRADVLC--ASTGDTGDSTDVMKGGVEDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGG 891
QRR +C A + G + + D+SV Y LHYPN + + + + V EHVDPSL+VVEP VEGL++ D+ S +WL E VC + G+E++LF G
Sbjct: 172 QRRMQRICDRALSLTVGYDIEPSNARTDKDFSVCYGLHYPN--IEGSGQSETENVFEHVDPSLYVVEPVPSVEGLDVYDQHSKQWLKAEKVC---------------VPGKEIVLFCG 272
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Match: A0A484DQY2_BRELC (2OG-FeII_Oxy domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQY2_BRELC) HSP 1 Score: 72.0 bits (175), Expect = 1.010e-10 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 619 EDDYSVSYALHYPNKCADPALEDQDLTVGEHVDPSLFVVEPCCGVEGLEIRDRASGRWLPVEAVCAGLGKATKGDEIPTEIEGRELILFGG 891
+ D+SV Y LHYPN E +++ EHVDPSL+VVEP VEGL++ D+ + +WL VE VC + G+E++LF G
Sbjct: 200 DSDFSVCYGLHYPNSEGSGQSEKENIF--EHVDPSLYVVEPVSSVEGLDVYDQHAKQWLQVEKVC---------------VPGKEIVLFCG 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19461.5410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19461.5410.1 >prot_H-elongata_contig19461.5410.1 ID=prot_H-elongata_contig19461.5410.1|Name=mRNA_H-elongata_contig19461.5410.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp MEKHGFVVLKDVGAVHHAYVKLVRLLKVFFDGASKRKEKCKGVVHFNERGback to top mRNA from alignment at H-elongata_contig19461:2329..3861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19461.5410.1 ID=mRNA_H-elongata_contig19461.5410.1|Name=mRNA_H-elongata_contig19461.5410.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1533bp|location=Sequence derived from alignment at H-elongata_contig19461:2329..3861- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19461:2329..3861- >mRNA_H-elongata_contig19461.5410.1 ID=mRNA_H-elongata_contig19461.5410.1|Name=mRNA_H-elongata_contig19461.5410.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1836bp|location=Sequence derived from alignment at H-elongata_contig19461:2329..3861- (Himanthalia elongata Himel1 dioecious)back to top |