mRNA_H-elongata_contig194277.5398.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A6H5LL89_9PHAE (Peptidase_M23 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL89_9PHAE) HSP 1 Score: 140 bits (352), Expect = 1.630e-37 Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
VLA R+GVVAA CDHF EGG + L PRAN+VALRH DGTYTRYVHLM GGVLV+V Q V AG+ IALSGNTG++ PHLHFD V VLPQE+ L
Sbjct: 35 VLASRAGVVAAYCDHFGEGGLRQGLRPRANYVALRHRDGTYTRYVHLMRGGVLVQVGQEVAAGEVIALSGNTGYSPTPHLHFDAVKVLPQETSEL 129
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A8J2WE38_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE38_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.970e-31 Identity = 58/95 (61.05%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
VLA R G +AAV DHFR GG L PRANFVA+RH DG+Y RY HL G L +V + V GQ IA SGNTG+T GPHLHFD+VN+LP+E+ L
Sbjct: 88 VLAARGGTIAAVVDHFRGGGAKAHLAPRANFVAVRHSDGSYARYYHLKEKGSLYKVGERVGRGQQIAWSGNTGYTGGPHLHFDLVNLLPEETSTL 182
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A7S3K4G7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4G7_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.050e-30 Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
VLA R GVVAAV HF GG L PRAN++A+RH DG+Y RY HL G ++V VK GQ IALSGNTG+T GPHLHFDVVNVLP+E+ L
Sbjct: 70 VLAARGGVVAAVVTHFSGGGARAHLAPRANYIAIRHDDGSYGRYYHLRKDGSKLKVGDRVKRGQVIALSGNTGYTGGPHLHFDVVNVLPEETAIL 164
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A7S2C303_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C303_9STRA) HSP 1 Score: 118 bits (296), Expect = 6.590e-30 Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
++A R GVVAA HF EGG + L PRANFVA++H DGTY RY HL GV V VKAGQ + LSGNTGF++ PHLHFDVV++LP+++ L
Sbjct: 79 LVAARPGVVAATAGHFNEGGLEGKLRPRANFVAVQHSDGTYARYFHLRRQGVTVEAGDTVKAGQQVGLSGNTGFSSTPHLHFDVVDMLPEDTCVL 173
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: UPI001E6149D6 (M23 family metallopeptidase n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI001E6149D6) HSP 1 Score: 112 bits (281), Expect = 1.400e-29 Identity = 55/90 (61.11%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQ 270
VLA R GVV V D FREGG DE+L RAN + +RH DGT YVHLM GG VRV Q V+ GQ I LSGNTG++TGPHLHF+V + P
Sbjct: 56 VLAAREGVVVEVRDTFREGGADEALRDRANRIKIRHDDGTIGAYVHLMRGGARVRVGQRVRRGQVIGLSGNTGYSTGPHLHFEVYKIEPN 145
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A7S2HAX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HAX5_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.740e-29 Identity = 50/90 (55.56%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 7 AGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQES 276
A R+GVVAA HF +GG PRANF+A++H DGTY RY HL G +V V AGQ +ALSGNTGF++ PHLHFDV N+LP+++
Sbjct: 1 AARTGVVAAAVAHFDKGGLKNDFRPRANFIAIQHADGTYARYFHLQKNGCSAKVGDQVIAGQQVALSGNTGFSSCPHLHFDVTNMLPEDT 90
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: F0Y178_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y178_AURAN) HSP 1 Score: 117 bits (293), Expect = 5.100e-29 Identity = 58/95 (61.05%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
V A R GVVAAV HF GG L PRANFVA+RH DG+Y RY HL G L +V V+AGQ IA SGNTG+T GPHLH DVVN+LP+E+ L
Sbjct: 91 VHAVRGGVVAAVVQHFSGGGAKAHLAPRANFVAVRHDDGSYARYYHLRTDGSLFKVGDSVEAGQHIAFSGNTGYTGGPHLHLDVVNLLPEETSRL 185
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: R1ECT1_EMIHU (Peptidase_M23 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ECT1_EMIHU) HSP 1 Score: 107 bits (267), Expect = 6.020e-26 Identity = 51/95 (53.68%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
VLA R+GVV CD FR G P AN V LRH DG Y+RY HL G + V V GQPIA SGNTGF++GPHLHFDV + P E+ L
Sbjct: 80 VLAARAGVVVEACDVFRAGAPKPEYRPLANHVVLRHADGLYSRYFHLKQGSLRTSVGAAVSVGQPIAASGNTGFSSGPHLHFDVTDSTPTETSLL 174
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A7S4BTM6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BTM6_CHRCT) HSP 1 Score: 107 bits (268), Expect = 2.000e-25 Identity = 56/95 (58.95%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
V+A R G VAAVCD F EGG + L RAN V +RH DG Y+RY HL LV Q V AGQ IA SGNTGF++GPHLHFDVV+V E+ CL
Sbjct: 72 VVAAREGEVAAVCDCFTEGGLRKELKARANHVVIRHADGLYSRYYHLQPSSALVCKGQRVTAGQRIAASGNTGFSSGPHLHFDVVDVFNLET-CL 165
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Match: A0A7S3BY81_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BY81_9EUKA) HSP 1 Score: 105 bits (262), Expect = 2.140e-25 Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 1 VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGGVLVRVNQVVKAGQPIALSGNTGFTTGPHLHFDVVNVLPQESECL 285
VLA R GVVAA D+F GGH +AN+VA+RH DG Y+RY HL + ++V Q+V GQPIA SGNTG++ PHLHFDVV+ L E L
Sbjct: 32 VLATRDGVVAAAVDNFTGGGHRLENKAKANYVAIRHVDGLYSRYYHLQHRSLMVSEGQIVVTGQPIARSGNTGYSAAPHLHFDVVDRLSTEFASL 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig194277.5398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig194277.5398.1 >prot_H-elongata_contig194277.5398.1 ID=prot_H-elongata_contig194277.5398.1|Name=mRNA_H-elongata_contig194277.5398.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp VLAGRSGVVAAVCDHFREGGHDESLLPRANFVALRHPDGTYTRYVHLMYGback to top mRNA from alignment at H-elongata_contig194277:119..1055- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig194277.5398.1 ID=mRNA_H-elongata_contig194277.5398.1|Name=mRNA_H-elongata_contig194277.5398.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=937bp|location=Sequence derived from alignment at H-elongata_contig194277:119..1055- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig194277:119..1055- >mRNA_H-elongata_contig194277.5398.1 ID=mRNA_H-elongata_contig194277.5398.1|Name=mRNA_H-elongata_contig194277.5398.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at H-elongata_contig194277:119..1055- (Himanthalia elongata Himel1 dioecious)back to top |