mRNA_H-elongata_contig19382.5380.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: D8LCW7_ECTSI (Zinc transporter zupT, Zinc transporter ZIP, metal ion transmembrane transporter activity n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCW7_ECTSI) HSP 1 Score: 230 bits (587), Expect = 1.610e-69 Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 1
Query: 388 TTVQADVPDEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILFLY 870
T AD +EKLVRMGL+TA+AIGIHNFPEG+ATFVA LSDP V XXXXXXXXXXXX CVAIPVYYATGNRWKAFGWA LSG+SEPIGAGL WLILKD M+E+VYG+LFGVVAGMMV I++ ELIPTAVRYDPTD VTTNSIIAGM IMALSL LFLY
Sbjct: 269 TPAVADGDNEKLVRMGLLTAVAIGIHNFPEGLATFVAALSDPSVXXXXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDIMSELVYGLLFGVVAGMMVNITIHELIPTAVRYDPTDKVTTNSIIAGMAIMALSLTLFLY 429
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A7S2RNM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNM0_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.020e-62 Identity = 139/290 (47.93%), Postives = 179/290 (61.72%), Query Frame = 1
Query: 1 AYLYGTLSFFGGILFYKCIDYVVHFLEGNASHHDIDIELYDLEQSSPDNGTSAGRNNFRGGVVSDPSASSDV--LKGGKVQPIQQQEHDQKSLDLAEPEKVSTAGGVQSAIEEEKRGGEGAGHDGAEAAVETTVQADVPDEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILF 864
A Y T FFGG++ +D+ VH++ G+A+H+D+ +++ +L + + + R G D +A S V ++GG Q ++ L E E + G + EE+ R ++LVRMGLMTALAIGIHN PEG+ATFV TL DP VG LXXXXXXXXXXXX CVAIP+YYAT +RW+AF WAF+SGISEPIGAGL W +L + + VYGI+FG+V GMMV I + EL+PTA RYDP D TT S IAGM +MALSLILF
Sbjct: 100 ANAYATACFFGGVIVGNFLDWTVHYINGDANHNDVVLDVDELRRELEE-AEAWERRVAEEGAAKDQAALSGVELVQGGAPIGSQAGGGAARTDALGELETAAKPGEESTTPEEDGR--------------------TEDSQRLVRMGLMTALAIGIHNLPEGLATFVGTLDDPAVGVGLXXXXXXXXXXXXXCVAIPIYYATHDRWQAFKWAFISGISEPIGAGLGWAVLHSIIDDRVYGIVFGLVGGMMVNICIHELLPTAFRYDPGDRFTTKSFIAGMALMALSLILF 368
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A6V2QEW8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QEW8_HETAK) HSP 1 Score: 209 bits (533), Expect = 2.900e-62 Identity = 143/294 (48.64%), Postives = 184/294 (62.59%), Query Frame = 1
Query: 1 AYLYGTLSFFGGILFYKCIDYVVHFLEGNASHHDIDIELYDLEQSSPDNGTSAGRNNFRGGVVSDPSASSDVLKGGKVQPIQQQEHDQKSLDLAEPEKVSTAGGVQSAIEEEKRGG----EGAGHDGAEAAVETTVQADVPDEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILFLY 870
AYLY +LSFFGGI F K +D +VH L+ + SH +L D + + + ++ V PS ++ L P D +L+L + K G+ S + R G G+ A + T + D +LVRMG++TALAIG+HNFPEG+ATFVATL DP VG ALXXXXXXXXXXXX CVAIP+YYATG+R KAFGWA +SGISEPIGAGL WL+L ++++YG AGMMV I L ELIPTA R+DP D++ +N ++AGM IMALSL+LF Y
Sbjct: 78 AYLYASLSFFGGIAFGKTLDVLVHKLDKSHSH-----DLPDRPEEASTTDIEDSQTSYDQ-TVDKPSKTNATLPQAVTSP------DLTTLNLDKAGKTVAGAGLGSPAGKGSRRGMLTTAGSATSLDTEATDGTHSKEPKDARLVRMGVLTALAIGLHNFPEGLATFVATLDDPSVGGALXXXXXXXXXXXXXCVAIPIYYATGSRAKAFGWALISGISEPIGAGLGWLVLSAVFSDVLYGXXXXXXAGMMVNICLHELIPTAHRHDPKDTIVSNCLVAGMAIMALSLVLFQY 359
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A6H5JKG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG5_9PHAE) HSP 1 Score: 208 bits (529), Expect = 4.850e-62 Identity = 138/289 (47.75%), Postives = 175/289 (60.55%), Query Frame = 1
Query: 1 AYLYGTLSFFGGILFYKCIDYVVHFLEGNA-SHHDIDIELYDLEQSSPDNGTSAGRNNFRGGVVSDPSASSDVLKGGKVQPIQQQEHDQKSLDLAEPEKVSTAGGVQSAIEEEKRGGEGAGHDGAEAAVETTVQADVPDEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILF 864
AYLY TLS FGG+L Y+ I++VV L G A H+++ + YDL SS + T++G D S +S + + G D+ +P+ T GG + +E KLV MGL+TA+AIGIHNFP+G+ATFV++L+DP V XXXXXXXXXXXX+CVA+PVYY TG+R KAFGWA LSG +EPIGA L WLILKD M+E+VYGIL + + +LIPTAVR+DP D VTTNSI AGM IMALSL+LF
Sbjct: 83 AYLYATLSLFGGMLCYRGIEFVVQLLGGGAFGEHNLEFDQYDLNNSSSNTVTASG----------DSSRNSTIKREGP-------------RDVEQPQPQETTGGANAVSGDEA--------------------------KLVHMGLLTAVAIGIHNFPDGLATFVSSLADPSVXXXXXXXXXXXXXXXXMCVAMPVYYGTGSRCKAFGWALLSGATEPIGAALGWLILKDVMSELVYGILXXXXXXXXXXVVIHDLIPTAVRFDPADKVTTNSISAGMAIMALSLVLF 322
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A7S2BFN7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BFN7_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.380e-60 Identity = 140/295 (47.46%), Postives = 179/295 (60.68%), Query Frame = 1
Query: 1 AYLYGTLSFFGGILFYKCIDYVVHFLEGNASHHDIDIELYDLEQSSPDNGTSAGRNNFRGGVVSDPSASSDVLKGGKVQPIQQQEHDQKSLDLAEPEKVSTAGGVQ----SAIEEEKRGGEGAGH-DGAEAAVETTVQADVPDEK--LVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILF 864
A+ L FF GI +DYVVH+LEG EL+ + + + G + D + D + G K K +A E+V+ AGG SAI G + G E A+ V A D + LV+MG+MTALAIG+HNFPEG+ATFV TL DP VG XXXXXXXXXXXX CV+IP+YYAT NRW+AF WAF+SGISEPIGA L W+ L + M++ Y ++FG+V+GMMV I + ELIPTAV+YDP D VT+ S+IAGM++MALSL+LF
Sbjct: 104 AHALAALCFFSGIAVGNLLDYVVHWLEGKDGAASEGAELFADAEGTTEKGQCCKSH--------DTESMFDAIDGIKA----------KHQAVATNEEVAEAGGAPKDAGSAITVSTSGSPNSSDLSGKEGALPMEVGAKDDDRQKALVKMGMMTALAIGLHNFPEGLATFVGTLDDPTVGXXXXXXXXXXXXXXXXCVSIPIYYATKNRWQAFKWAFISGISEPIGAALGWIFLANCMSDSAYAVIFGLVSGMMVNICIHELIPTAVKYDPEDKVTSKSVIAGMLVMALSLVLF 380
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: F0Y6B2_AURAN (Cilia- and flagella-associated protein 206 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6B2_AURAN) HSP 1 Score: 211 bits (536), Expect = 2.570e-58 Identity = 141/288 (48.96%), Postives = 171/288 (59.38%), Query Frame = 1
Query: 1 AYLYGTLSFFGGILFYKCIDYVVHFLEGNASHHDIDIELYDLEQSSPDNGTSAGRNNFRGGVVSDPSASSDVLKGGKVQPIQQQEHDQKSLDLAEPEKVSTAGGVQSAIEEEKRGGEGAGHDGAEAAVETTVQADVPDEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILF 864
AYL T S F G+LF +D +VH L+ N + H + +S V D A+S G V D+ + V+ G S E E + A+E D+ L RMG+MTALAIGIHNFPEG+ATFVATL DP VG ALXXXXXXXXXXXX CV+IP+Y+ATG+RWKAF WA LSG+SEP+GA L WL+LKD E++YGI+FG+VAGMMV+I L ELIPTA RYDP D V T SI AGM++MA SL LF
Sbjct: 79 AYLAATASLFAGMLFMSLLDALVHTLDPNHTGHMSSDPARYIPKS----------------VEGDAPAASCCAMGDDV-------FDEIEARKRKARAVADEAGAPSQAEGRPNASEDTDAESGAKALEVEAPEAAGDKPLERMGVMTALAIGIHNFPEGLATFVATLDDPAVGGALXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEPVGALLGWLLLKDHFNELLYGIVFGMVAGMMVMICLNELIPTAHRYDPQDKVVTKSITAGMVVMAASLCLF 343
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A6U3SFV9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SFV9_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.510e-56 Identity = 131/308 (42.53%), Postives = 188/308 (61.04%), Query Frame = 1
Query: 1 AYLYGTLSFFGGILFYKCIDYVVHFLEG---NASHHDIDIELYDLEQSSPDNGTSAGRNNFRGGVVSDPSASSDVLKGGKVQPIQQ--QEHDQKSLDLAEPEKVSTAGGVQSAIEEEKRGGEGA-----GHDGAEAAVETTVQADVPD----------EKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILF 864
A++Y TL FFGG++ ID++V G N +H ++ DL ++ A +N + A+ + G P+ + + H++ ++ + ++ T V++ ++ G G+ DG + ++ + V +KLV+MG+ TA+AIG+HNFPEG+ATFVA L DP VG LXXXXXXXXXXXX CVA+P+YYATGNR KAFGWA +SG+SEP+ A L W IL ++ ++ +Y +LFG+V GMMVIIS +EL+PTA RYDP D+V T S I GM+IMALSL+LF
Sbjct: 80 AHIYATLCFFGGVIIMLLIDFLVRLFSGEHHNHNHPSSNVPQQDLSKAE------AEKNGLEDASEEEQFAAPHCV-GCSDDPVGELREWHEKAEAEVRDHKQNQTVASVETPGDQNAAGDAGSLSADSASDGFKDEIDGRTKLAVDGFKGLESSHEHKKLVKMGISTAIAIGLHNFPEGLATFVAALDDPRVGGVLXXXXXXXXXXXXXCVALPIYYATGNRTKAFGWALISGLSEPLAALLGWAILANSFSDTLYAVLFGIVGGMMVIISCKELLPTAHRYDPEDTVVTYSFIGGMVIMALSLVLF 380
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A7S3QH48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QH48_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.600e-56 Identity = 103/154 (66.88%), Postives = 134/154 (87.01%), Query Frame = 1
Query: 403 DVPDEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILF 864
++ ++KLVRMG+ TA+AI +HNFPEG+ATFVA L DP +GA LXXXXXXXXXXXX CVA+P+YYATGNR KAF W LSG+SEP+GA L WL+L ++ ++ +YG++FG+VAGMMV+ISL+EL+PTA RYDP D+V TNSIIAGM+++ALSL+L+
Sbjct: 189 EIENKKLVRMGMQTAVAIALHNFPEGLATFVAVLEDPKIGAILXXXXXXXXXXXXFCVALPIYYATGNRKKAFWWGALSGMSEPVGALLGWLVLANSFSDAIYGLMFGLVAGMMVMISLKELLPTAYRYDPGDTVVTNSIIAGMVVIALSLVLY 342
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: A0A8J2SXP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXP3_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.100e-55 Identity = 106/153 (69.28%), Postives = 127/153 (83.01%), Query Frame = 1
Query: 412 DEKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILFLY 870
D++L MG+MTALAIGIHNFPEG+ATFVATL DP VGA+ XXXXXXXXXXXX CV+IP+Y+ATG+RWKAF WA LSG+SE +GA L W +LKD ++YGI+FG+VAGMM++I L ELIPTA RYDP D V T SI+AGM +MA SL LF+Y
Sbjct: 168 DKRLESMGMMTALAIGIHNFPEGLATFVATLDDPAVGASXXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEIVGALLGWALLKDHFDNLLYGIVFGMVAGMMIMICLNELIPTAHRYDPRDRVVTKSIVAGMAVMAASLCLFVY 320
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Match: B7G5W7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5W7_PHATC) HSP 1 Score: 192 bits (489), Expect = 2.400e-55 Identity = 107/151 (70.86%), Postives = 126/151 (83.44%), Query Frame = 1
Query: 415 EKLVRMGLMTALAIGIHNFPEGVATFVATLSDPVVGAALXXXXXXXXXXXXLCVAIPVYYATGNRWKAFGWAFLSGISEPIGAGLAWLILKDTMTEMVYGILFGVVAGMMVIISLQELIPTAVRYDPTDSVTTNSIIAGMIIMALSLILFL 867
+KL+RM L TALAIGIHNFPEG+ATFVA L DP VGA L XXXXXXXXXXX CVA+PVYYATGNRWKAFGWA LSG+SEP+ A L W +L + ++ +YG+LFG+VAGMMV+IS +EL+PTA RYDP D V T + I+GM IMALSL+LFL
Sbjct: 239 KKLLRMSLNTALAIGIHNFPEGLATFVAALGDPKVGAVLAXXXXXXXXXXXXCVAMPVYYATGNRWKAFGWAMLSGMSEPVAALLGWAVLASSFSDTLYGLLFGMVAGMMVVISTRELLPTAHRYDPEDCVVTYAFISGMCIMALSLVLFL 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19382.5380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19382.5380.1 >prot_H-elongata_contig19382.5380.1 ID=prot_H-elongata_contig19382.5380.1|Name=mRNA_H-elongata_contig19382.5380.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp AYLYGTLSFFGGILFYKCIDYVVHFLEGNASHHDIDIELYDLEQSSPDNGback to top mRNA from alignment at H-elongata_contig19382:4633..5505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19382.5380.1 ID=mRNA_H-elongata_contig19382.5380.1|Name=mRNA_H-elongata_contig19382.5380.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=873bp|location=Sequence derived from alignment at H-elongata_contig19382:4633..5505+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19382:4633..5505+ >mRNA_H-elongata_contig19382.5380.1 ID=mRNA_H-elongata_contig19382.5380.1|Name=mRNA_H-elongata_contig19382.5380.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at H-elongata_contig19382:4633..5505+ (Himanthalia elongata Himel1 dioecious)back to top |