prot_H-elongata_contig193609.5373.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig193609.5373.1
Unique Nameprot_H-elongata_contig193609.5373.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
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BLAST of mRNA_H-elongata_contig193609.5373.1 vs. uniprot
Match: D8LHM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM7_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.510e-5
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:   93 SLGILADDDLFAELGIEAKPTFSGKKA-PRSTASRASRLAASEAT 136
            ++GILADDDLFAELGIEAKPTF  KK  P   A R+  L ASEAT
Sbjct: 1650 TIGILADDDLFAELGIEAKPTFREKKPRPGQAADRSLALQASEAT 1694
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193609.5373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHM7_ECTSI1.510e-568.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig193609contigH-elongata_contig193609:93..775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig193609.5373.1mRNA_H-elongata_contig193609.5373.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig193609 93..775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig193609.5373.1 ID=prot_H-elongata_contig193609.5373.1|Name=mRNA_H-elongata_contig193609.5373.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
VDTSNAAESSDNWGWDGEEEEDIEMPTVKPTARTVSSHGRNPGLGGVSDG
SSGDNILAPIKASAGAAAASRPRPEAKRGRRPVGDRGGGQAESLGILADD
DLFAELGIEAKPTFSGKKAPRSTASRASRLAASEAT
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