mRNA_H-elongata_contig19349.5369.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19349.5369.1
Unique NamemRNA_H-elongata_contig19349.5369.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: D7FZ57_ECTSI (Plastid-lipid associated protein PAP / fibrillin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ57_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 2.280e-90
Identity = 143/207 (69.08%), Postives = 168/207 (81.16%), Query Frame = 3 
Query:  324 RRTESHRVLHASSSSNWFSQLL--KPAATSENKSPEVKKLKQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPEESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVKSK 938
            RR    + LHA+SS+NWF+Q    +   T E       KLKQ+LLD VR T+RG+ST+EEQR  I+ LIAA+EP NPNA SVTSE+LSA WILEWTTEREI+FLM+ GLPGKPSGPV+Q IDV A+ LSN M+FG D+ FEVAS+IDPE+SGPRVNFEFEACK KYGG  +PLPPVGKGWFESVYLD+DLRVTRD+RGDV+VLVK +
Sbjct:   59 RRYRQQQTLHATSSNNWFAQFWPNREDKTGETLEAAKNKLKQRLLDTVRDTKRGISTSEEQRKDIDELIAAIEPFNPNAKSVTSESLSARWILEWTTEREIIFLMERGLPGKPSGPVEQDIDVDARTLSNRMIFGDDSLFEVASSIDPEDSGPRVNFEFEACKLKYGGFTIPLPPVGKGWFESVYLDQDLRVTRDVRGDVTVLVKGQ 265
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A835YUD2_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 5.820e-43
Identity = 85/176 (48.30%), Postives = 111/176 (63.07%), Query Frame = 3 
Query:  426 VKKLKQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDT-------SFEVASTIDPEESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVK 932
            VK+LK +LL +   T RGVS TEEQR  I+ L+ AL  +N   D+ TS  L+  W+L+WT E+E  FL+++GL G  +G V Q ID   + LSN +LFG          +F+V ST  PE SG RVNFEF +C  ++    VPLPPVGKGWF SVYLDE +R+T D RGD  +  +
Sbjct:   62 VKQLKSELLSIAGATGRGVSMTEEQRTRIDELMEALTKVNKVKDAATSPLLNGKWVLQWTDEKETAFLLKSGLFGLKTGEVSQTIDTKQQVLSNAVLFGTGDDVASAQGTFQVGSTAIPETSGARVNFEFLSCSIRWKKFTVPLPPVGKGWFASVYLDESMRITTDSRGDRQIFTR 237
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A7S3XXJ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXJ7_HETAK)

HSP 1 Score: 152 bits (384), Expect = 1.270e-39
Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = 3 
Query:  420 PEVKKLKQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSE---TLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTI-DPEESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSV 923
            P  + +K QLL VV  +QRG+ TT E + LI   IA LE LNP A +   E   TL+  W L WTTE+E+LF+ + G  G P   + Q ID +  +L N++ F +D+ F V S+  + +++  RVNFEF +C  K+  I+VPLPP GKGWFE+VYLD+DLR+ RD RGD+ +
Sbjct:   74 PSTRDIKAQLLKVVEDSQRGLLTTPEDQELINDYIAKLEALNPAAKADPEEYRRTLNKRWRLTWTTEQEVLFIAEKGFFGLPVMDIYQDIDTVNNRLQNMIEFPQDSYFSVMSSCREDQDNTLRVNFEFSSCSAKWKSIKVPLPPFGKGWFENVYLDDDLRINRDSRGDLQI 245
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A8J2SJ13_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ13_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.920e-32
Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 3 
Query:  384 LLKPAATSENKSPEVKKLKQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGL-PGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPEE---SGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVK 932
            L + AA     +P+    KQQLLD+   +  G +  +  R  ++ LI  L  +NP      S   S  W L WTTE E+LF ++ GL    P   V+Q IDV   +L N++LF  D+   V STI+P+    SG R NF F +C  ++ G  +PLPPVGKGW + +YLD+DLRV RD+RGD+ +  K
Sbjct:   12 LTQAAALQAFFAPKSSTPKQQLLDLCTGSNYGANPIDRDR--LDGLIDQLASINPTPRPAESPKFSGNWKLLWTTESELLFAVEKGLFAAGPCTGVEQTIDVANGRLENLVLFDNDSRLFVGSTIEPDAADASGARFNFAFSSCSLRWRGYDIPLPPVGKGWGDLLYLDDDLRVQRDVRGDLLIATK 196
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A7S2PBM2_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PBM2_9DINO)

HSP 1 Score: 128 bits (322), Expect = 2.100e-31
Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 3 
Query:  429 KKLKQQLLDVVRKTQRGV-STTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPE-ESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVK 932
            ++LK+QLL +VR +  GV   +E  ++  + ++A L  LNP  D   S   S  W L WTTE+E+LF ++ GL G P     Q ID++A  L N +LF + +  +V S++  + E+  R  F+F +C  K+  I+VPLPPVG GW E  YLDED+R+ RD+RGD+ +  K
Sbjct:   16 RELKEQLLALVRPSNCGVVPLSETSQSDFDAVVAELIALNPTVDPARSPLFSGEWQLLWTTEQELLFCIEKGLFGLPCTGSTQNIDMLAGTLENRILFEEGSYLKVGSSLAQDSENSARFTFKFGSCSLKWKDIEVPLPPVGAGWGELAYLDEDMRIQRDVRGDLLIAAK 185
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: F0YCT6_AURAN (PAP_fibrillin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCT6_AURAN)

HSP 1 Score: 122 bits (307), Expect = 1.930e-29
Identity = 71/170 (41.76%), Postives = 97/170 (57.06%), Query Frame = 3 
Query:  438 KQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGL-PGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDP---EESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVKS 935
            K +LL + R T  GV    + R+  + L+A LE  NP      S   S  W L WTTERE+ F M  GL    P   V Q IDV A  L N +LF  D+   V S+I P   + +G R +F+F +C  ++ G +VPLPPVG+GW + +YLD+ LRV RDIRGD+ +  ++
Sbjct:    5 KDELLALCRATTSGVM---DDRDRFDELLALLEAANPTPRPAESPLFSGAWDLLWTTERELNFAMDKGLFAAGPCTGVSQTIDVAAGDLENTVLFDNDSKLFVGSSIAPSPDDAAGRRFDFKFSSCYLQWRGTKVPLPPVGEGWGDILYLDDTLRVQRDIRGDLLIATRA 171
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A0M0JUH7_9EUKA (Putative plastid-lipid-associated protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUH7_9EUKA)

HSP 1 Score: 125 bits (313), Expect = 9.580e-29
Identity = 70/182 (38.46%), Postives = 104/182 (57.14%), Query Frame = 3 
Query:  393 PAATSENKSPEVKKLKQQLLDVVRKTQRGVSTTEEQRNL-IERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPEES-GPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVK 932
            P +++     + + LK +LL++ R ++ G+   +       ER++A L  LNP AD   S   +  W   WTTE+E+ F +  GL G P     Q IDV    LSN++ F    +  V STI P+ + G R NF FE C  ++ G+ VPLPPVGKGW E +YLD++LR+ +D+RGD+ +  K
Sbjct:  136 PPSSTFTAGAQRRSLKAELLELARASRGGIEPFDAAAQARFERVMAQLPALNPTADPARSTLFNGEWTCVWTTEKELNFAVDKGLFGLPWVRTYQTIDVPGGTLSNVIEFDGG-ALTVGSTIAPDTALGSRFNFAFERCTVRWRGLTVPLPPVGKGWGELLYLDDELRIQKDVRGDIVIATK 316
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A7S1NRP4_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRP4_9EUGL)

HSP 1 Score: 129 bits (325), Expect = 1.190e-28
Identity = 72/185 (38.92%), Postives = 103/185 (55.68%), Query Frame = 3 
Query:  423 EVKKLKQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPEESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVKSKS*SREPIALFGRD 977
            +++ LK +L D+V     G   +  Q   +  ++  LE LNP  D   S  L A W L WTTE+E LF +  GL G      +Q ID    +L N+++F     F+V ST+ PE    R NF+F  C  K G  +VPLPPVGKGWF++++LDE LR+ RDIRGD  ++ + +     P ++ G D
Sbjct:  504 QIRALKAELYDLVAPLNYGADMSPAQCATVLAVVEQLEALNPVPDPAASALLDARWDLLWTTEKEQLFFVSKGLFGSKFLAAKQDIDKDGGRLQNMIVFENGDYFKVGSTLRPEPPA-RCNFQFSDCLCKKGTWRVPLPPVGKGWFDTIFLDETLRIARDIRGDTLIVTRERG--ATPFSVPGED 685
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A7S2CNF1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CNF1_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 3.240e-28
Identity = 65/163 (39.88%), Postives = 95/163 (58.28%), Query Frame = 3 
Query:  435 LKQQLLDVVRKTQRGVSTTEEQRNL-IERLIAALEP-LNPNADSVTSETLSALWILEWTTEREILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPEES---GPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIR 908
            LK + +++ R++  G+ T +E R   +E ++  L P LNP A    S   S  W   WTTE E+ F +  GL G P     Q IDV ++ L+N +LF  D +  V S++ P++    G R NF F  C  +Y G+ VPLPPVG+GW E +YLD++LR+ RD+R
Sbjct:   19 LKDEFMELARESSGGIKTLDETRQARLEEIVTTLLPALNPTAQPARSPLFSGEWECRWTTEAELNFAVDKGLFGLPWERTYQTIDVQSQLLTNFILFS-DGALTVGSSVVPDKDSADGARFNFAFSECLLRYKGVTVPLPPVGRGWGELLYLDDELRIQRDVR 180
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BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Match: A0A833RJB5_9POAL (Putative plastid-lipid-associated protein 11 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RJB5_9POAL)

HSP 1 Score: 120 bits (301), Expect = 4.090e-28
Identity = 71/169 (42.01%), Postives = 104/169 (61.54%), Query Frame = 3 
Query:  438 KQQLLDVVRKTQRGVSTTEEQRNLIERLIAALEPLNPNADSV--TSETLSALWILEWTTEREILFLMQN-GLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPEESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGDVSVLVKS 935
            K  LLD++    RG+ T        E +I+A++ L    +    T ++LSA W + WTTE+E LF+++N GL G  +G V Q IDV  K+L+N++ F     F V STI+ E    RVNF+F +   +    ++PLPP G+GWFESVYLD+D+RV +DIRGD  V+ ++
Sbjct:   41 KSDLLDLITDQDRGLKTQSNPSRRAE-IISAIDTLAFLGEGTVTTGKSLSATWRMLWTTEKEQLFIVKNAGLFGTEAGDVLQVIDVENKRLNNVITFPPSGVFFVRSTIETEPP-QRVNFKFTSAVLRGSSWEIPLPPFGQGWFESVYLDDDIRVAKDIRGDYLVVERA 207
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19349.5369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ57_ECTSI2.280e-9069.08Plastid-lipid associated protein PAP / fibrillin f... [more]
A0A835YUD2_9STRA5.820e-4348.30PAP_fibrillin domain-containing protein n=1 Tax=Tr... [more]
A0A7S3XXJ7_HETAK1.270e-3946.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SJ13_9STRA1.920e-3240.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2PBM2_9DINO2.100e-3141.18Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
F0YCT6_AURAN1.930e-2941.76PAP_fibrillin domain-containing protein (Fragment)... [more]
A0A0M0JUH7_9EUKA9.580e-2938.46Putative plastid-lipid-associated protein chloropl... [more]
A0A7S1NRP4_9EUGL1.190e-2838.92Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A7S2CNF1_9EUKA3.240e-2839.88Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A833RJB5_9POAL4.090e-2842.01Putative plastid-lipid-associated protein 11 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19349contigH-elongata_contig19349:229..4568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.8
Seed ortholog evalue2e-74
Seed eggNOG ortholog2880.D7FZ57
EggNOG free text desc.PAP_fibrillin
EggNOG OGs2CNCY@1,2QVAR@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-02_006360.1
Exons5
Model size1365
Cds size780
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930102.357291-UTR-H-elongata_contig19349:228..6491622930102.357291-UTR-H-elongata_contig19349:228..649Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19349 229..649 -
1691679280.8047528-UTR-H-elongata_contig19349:228..6491691679280.8047528-UTR-H-elongata_contig19349:228..649Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19349 229..649 -
1622930102.4647796-UTR-H-elongata_contig19349:4404..45681622930102.4647796-UTR-H-elongata_contig19349:4404..4568Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19349 4405..4568 -
1691679280.8769982-UTR-H-elongata_contig19349:4404..45681691679280.8769982-UTR-H-elongata_contig19349:4404..4568Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19349 4405..4568 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930102.3842762-CDS-H-elongata_contig19349:649..7421622930102.3842762-CDS-H-elongata_contig19349:649..742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 650..742 -
1691679280.8153498-CDS-H-elongata_contig19349:649..7421691679280.8153498-CDS-H-elongata_contig19349:649..742Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 650..742 -
1622930102.3995645-CDS-H-elongata_contig19349:1242..13291622930102.3995645-CDS-H-elongata_contig19349:1242..1329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 1243..1329 -
1691679280.824172-CDS-H-elongata_contig19349:1242..13291691679280.824172-CDS-H-elongata_contig19349:1242..1329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 1243..1329 -
1622930102.4163213-CDS-H-elongata_contig19349:1511..17351622930102.4163213-CDS-H-elongata_contig19349:1511..1735Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 1512..1735 -
1691679280.8329916-CDS-H-elongata_contig19349:1511..17351691679280.8329916-CDS-H-elongata_contig19349:1511..1735Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 1512..1735 -
1622930102.4336417-CDS-H-elongata_contig19349:3725..38821622930102.4336417-CDS-H-elongata_contig19349:3725..3882Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 3726..3882 -
1691679280.8419101-CDS-H-elongata_contig19349:3725..38821691679280.8419101-CDS-H-elongata_contig19349:3725..3882Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 3726..3882 -
1622930102.4505556-CDS-H-elongata_contig19349:4185..44041622930102.4505556-CDS-H-elongata_contig19349:4185..4404Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 4186..4404 -
1691679280.8538196-CDS-H-elongata_contig19349:4185..44041691679280.8538196-CDS-H-elongata_contig19349:4185..4404Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19349 4186..4404 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19349.5369.1prot_H-elongata_contig19349.5369.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19349 650..4404 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19349.5369.1

>prot_H-elongata_contig19349.5369.1 ID=prot_H-elongata_contig19349.5369.1|Name=mRNA_H-elongata_contig19349.5369.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp
MRSYSALLALAICSLHWCGAGAFVTHASARHNRINIGFRHGTVRGGPRQG
CRQRRTESHRVLHASSSSNWFSQLLKPAATSENKSPEVKKLKQQLLDVVR
KTQRGVSTTEEQRNLIERLIAALEPLNPNADSVTSETLSALWILEWTTER
EILFLMQNGLPGKPSGPVQQRIDVIAKKLSNIMLFGKDTSFEVASTIDPE
ESGPRVNFEFEACKFKYGGIQVPLPPVGKGWFESVYLDEDLRVTRDIRGD
VSVLVKSKS*
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mRNA from alignment at H-elongata_contig19349:229..4568-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19349.5369.1 ID=mRNA_H-elongata_contig19349.5369.1|Name=mRNA_H-elongata_contig19349.5369.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4340bp|location=Sequence derived from alignment at H-elongata_contig19349:229..4568- (Himanthalia elongata Himel1 dioecious)
AATATAGTTTCTTGTGTGTACGTTTAACGTTTACAGTATTGATAGCTATT
ATCGGATACTGCTCTTTTGAATAGATAAGAGTATGCAATATATCCCATGT
ACGAGCAGTAATATTTGTTACAACGTATACTATTAATCGCGCTGGGTACG
AAGCAGCTGTGGTCATGAGGTCCTACAGTGCACTCCTGGCTTTAGCAATA
TGCTCTTTACATTGGTGTGGTGCTGGGGCATTCGTCACACACGCTTCGGC
AAGACATAACCGTATAAACATCGGTTTCCGACATGGTACCGTCAGGGGAG
GTCCACGTCAAGGTTGTCGTCAGCGCCGTACAGAATCACACCGCGTGCTC
CACGCCAGCAGCAGCAGCAACTGGTTTTCGCAGGCAAGTGGCTCGCGTTC
AAGGCCGCATTTATTTTTTTCCTGTGTTCCTTTAGTAGTTCTTCCGATCG
TGAGGCCGAGTGATGGTTCCAGTAGTACCTTCAATGGCGTGAGGGCGATT
CAAAGCATGTGACTCGACACATGAGAACCCGGTTCATTCGATGAAAAGTC
AACATGGTGTCGTTACCTGGCGATCAGGAGTTCAACTGTACCCGTCCATG
TCTAGCTCGCCTAGGTCCAAGGCGGCAACAGTAGCAGTTACCAGAAATTC
CGTTGTCGAAGAGCAATTTCCCCACCAATCGTGCAGCTCTTGAAGCCCGC
GGCCACGAGCGAGAACAAAAGTCCTGAAGTCAAGAAATTGAAGCAGCAGC
TTTTGGATGTTGTGAGGAAAACGCAGCGCGGGGTTTCAACAACCGAGGAG
CAACGGAACCTTATCGAAAGGCTGATCGCCGCCTTGGAGCCGTGTGAGTT
CGCTGAGCGCACCACCAAACAGCGATATACGGTAGTAGTACTCAAACGAA
AGGCATGGAAGTCATCGAATGGCCCGTAAGCTTCTTATAGCCCCAAGTGC
ACTGCTGGCCTTATTGCCATGGTAGCTGTCGATCAACAATCCATCACTCC
AATTTTTCTGTAAAACATACTAATAATAGTATTAACTAAATAATTCCAAC
CCTACGAACATCCACGTCTTCTTAGCACCGTGAGGTGCAGTCCAGGGGAC
CAATTACCATTAGGTTCGAATGTTACAACTATCTTTGAGCACGAAATCGT
TGCTATTCCCCAATAGTAAATTAATCGGGTCGACGGTAGAATGTCGAGGA
TCCCATCATTATCCCACTTACATTATTCATCATGTGGAGACTATGACCAA
GCCAGAGCCTAAAGAGTGAACTGCAGTAGTTAGAAGGGTTGTTAGGCATA
GGTAAATAAGATATATTGGTAAGGCTCGGTAGAGATATTTCTATACATAA
AAAAGTATAGATTGGTAGGCATACTGAGCTCGAAGTGAAAAAAGGGGGGG
GGGGCCGAAATAAAGTTCATTTTTATGAAAGAAACTTAATTTTTCGGGCA
ATAGACTTCTCTATACGCGCAAACCGACTAAAATGGGCTGATTTCCCGTG
ACCACGAGCAAGTATGTAAAACCCCGTAGGCGGCGCATTCAAAGGTGAAA
GGGTGGGACGACTGCTGTGTATCGAACACAATCGATTATGCGTCCTTCTC
CCAGCCGGAAGAAGCATGACAGAATGAGCGGAAGATTAGTGGCGGTATGG
CGCTAAATACAGCAGTCTTGTGTGTGTTTGTGTTGTTCGTGCCTCCAGCG
TTGTCATCCCATCTACAGATACTTCTGCTGTATGACCAGGTTTGGCGTGA
GTAAATTTTTTAAAAGAGGCTTTCAAAAAAATCAGTCTTCTTGTGCTTTC
TATGTCGATAACTGATCCACTCGAAGGACTCGGCGGTGACTGGCGGGGTA
GGCCGGTAATGTATGGCCGATGTCGTTGTCCACAGCAGTTGTTCGTCCAT
CAGTATACAGCTTCAATATTTCAAACTTCCAAGCTACTTGTTGTGTCCTG
CACGCCAGGAAAAAAAAAAANNNNNNNNNNAATCTTAAAATATATTTTTT
TTATCCAGAAAAAGAAAAAAAAAAAAAAAAAAAAAAGTCTTTGAAAAAAA
GCAGTGTTCTTGTGCTTTCTCTGTCGATAGCTGATCCACGCGGAGGGCTC
GGCGGTGACTCTGGCGAGGTAGACCGGTTATGGCCAATGTCGTTTTCCAC
TGCAGTCGTTCGTAAATCGGTATACAGCTCTATGATTTTTAACTTCCAAG
CTGCTTGTTGCTGTGTACTGCACGCGAGTGTGTATCCTGCAGCATCCCTC
CCAAGCGCCCGAACTCCACAATTTCATTCTTTTGGTCCTCGATAAAAAAA
GGGTCCCAGCGGGCACTTCTTTTTCATGGCGCGAAAAATGAAAACACAGC
TGCGTATAAATGGGAATGCCTCTTCGAAATTGAGGACGCAACTTCCTCTG
ACCAATAAGAATAAAACAAACGGAGCAAGATATAGGCATCTTCCTCCCGG
GGTTAAGACAATTACAATCCATAGAAGCTACAAAGCATTGACGTGTGCGT
GAGACACAAAAACGGAGAGATATTGTCACTGCAAAAAATAAAACATAAGT
TACTGGCAATCGAACGCAGGATTTTGGTGTGTGGGGGCTCAGTCACCCGT
CGTGGTAGCAATCGCCAAGGACCGACCACAAACGGCTCGCGTCTACCATG
AGTTAGAACAAGGTATTTGGCTATCAACTCAGTAATACCATTAGGCCTCA
ATCGGCGCAGTCGGTGCCGCTGCAGGGAACCCTGAGGCGGTCCAATGAGC
TCTTCTCGAAAGCATCTCAGTTTTCTTCCCGTGGATGAGCCTAATTACGT
GCACGTACGGAACATCCTTGTTCGTGACAACAGTGAACCCGAACGCTGAT
TCGGTGACGAGCGAGACCCTCAGCGCGCTATGGATCCTGGAGTGGACTAC
TGAGCGAGAGATATTGTTCTTGATGCAGAACGGCTTGCCTGGAAAGCCCT
CCGGGCCCGTTCAGCAAAGAATCGACGTGATCGCCAAGAAGCTGTCCAAC
ATAATGCTATTTGGGAAGGACACCTCGTTTGAGGTGGCATCAACTATTGA
CCCGGAGGTATCTAACACGTGACCTGCGTTCAAGTCGTCTGCCGCATAGC
CCCTGACTCGCCTTGATCCCAAATTAGACCCGAGACGCTGCAAAGTTGGT
TTTGCTCGCCTCTGCGTTCAACGATTTCACAGCCGTAGCGTCGGTCTTCT
GAGCGTCGAGTGCTGCCCGCGTTCTGTCTCCCCACCCAGGAATCAGGGCC
TCGCGTGAATTTCGAATTCGAAGCCTGTAAGTTCAAGTATGGGGGCATCC
AAGTACCCTTACCGCCGGTGGGAAAGGTGAGATCTCACGTCGTCGGTATT
ATTTTTGCCCGCGATGGAACGGCGTATTTATTCCCCTCCCCTTCAGGCGA
AAAGGGTTTCCATCTTATTGGGCATAGGTCACGCTGTTTCGGGTCCCGAT
TATCGAAACTGAAGCTACCATATTATGAATTAATTAATGAACTAATATGC
AGGAAAAGTTTCCGCTGAAGCAGTTGAATTAATGGGTCCTCTCCGTGACC
GCGAGGTTGAAGATGAACGTTACGTATTCGTTTGGGAGTTTGAGTGCCAA
CCCTAGTCATACGATGTTAGATAGGATAAGGCTGCCGAGCTCGAGCTCAT
TGCAATGATTACATGTATTGTAGTTAAGGCTGCAACAGGGAAATCAAAGG
CGGGTTATCGACCTGACCATGCACCCTTCTCCCAACTTTGACCACATCCC
TTTGTCGCCGGCCGTTCCCTCTGCGGTGCTTTTTTCTTGTTTGAACCTCT
GATGCCGTGCTCGTTCCAATGTTTAGGGCTGGTTCGAGAGCGTCTACCTC
GACGAAGATTTGAGAGTGACACGGGACATTCGGGGCGATGTTTCCGTACT
TGTGAAGAGCAAAAGCTGAAGCCGCGAGCCCATTGCTTTATTTGGAAGGG
ATCATACGATGACCTGCACGGGGTTTGCTAATTGCGCGGTCGATGGACTA
AATTTTATTTACAAAGGAGGACTATAAGACACGAATCCACTCCCACTCGA
CGCGCCTTTGTCCATGCCGCTTGACAATGATTATGACAACCAAAAGAAAT
ATAAAGCCCCGAATGATAGGATTTCATCTTTCAAAAATTGAGGCTTTTGC
CTTTCTTCCCTAAAAGTTTATTGTCCACGGTTGAAGGTTTGCCACTGTCG
GGCGACGTAAAAATTAAGCGCCATCACACCAAAATCGAAAAGAGCCTAAC
TCAAAGGAAGAATCTTGCTCACCGGAAGTCGTCTTTTCTTGCGACACACT
TACATTAGATGCTTGTACGGCGTCTTGACCAGCATCAGGT
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Coding sequence (CDS) from alignment at H-elongata_contig19349:229..4568-

>mRNA_H-elongata_contig19349.5369.1 ID=mRNA_H-elongata_contig19349.5369.1|Name=mRNA_H-elongata_contig19349.5369.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1560bp|location=Sequence derived from alignment at H-elongata_contig19349:229..4568- (Himanthalia elongata Himel1 dioecious)
ATGAGGTCCTACAGTGCACTCCTGGCTTTAGCAATATGCTCTTTACATTG
GTGTGGTGCTGGGGCATTCGTCACACACGCTTCGGCAAGACATAACCGTA
TAAACATCGGTTTCCGACATGGTACCGTCAGGGGAGGTCCACGTCAAGGT
TGTCGTCAGCGCCGTACAGAATCACACCGCGTGCTCCACGCCAGCAGCAG
CAGCAACTGGTTTTCGCAGATGAGGTCCTACAGTGCACTCCTGGCTTTAG
CAATATGCTCTTTACATTGGTGTGGTGCTGGGGCATTCGTCACACACGCT
TCGGCAAGACATAACCGTATAAACATCGGTTTCCGACATGGTACCGTCAG
GGGAGGTCCACGTCAAGGTTGTCGTCAGCGCCGTACAGAATCACACCGCG
TGCTCCACGCCAGCAGCAGCAGCAACTGGTTTTCGCAGCTCTTGAAGCCC
GCGGCCACGAGCGAGAACAAAAGTCCTGAAGTCAAGAAATTGAAGCAGCA
GCTTTTGGATGTTGTGAGGAAAACGCAGCGCGGGGTTTCAACAACCGAGG
AGCAACGGAACCTTATCGAAAGGCTGATCGCCGCCTTGGAGCCGTCTCTT
GAAGCCCGCGGCCACGAGCGAGAACAAAAGTCCTGAAGTCAAGAAATTGA
AGCAGCAGCTTTTGGATGTTGTGAGGAAAACGCAGCGCGGGGTTTCAACA
ACCGAGGAGCAACGGAACCTTATCGAAAGGCTGATCGCCGCCTTGGAGCC
GTTGAACCCGAACGCTGATTCGGTGACGAGCGAGACCCTCAGCGCGCTAT
GGATCCTGGAGTGGACTACTGAGCGAGAGATATTGTTCTTGATGCAGAAC
GGCTTGCCTGGAAAGCCCTCCGGGCCCGTTCAGCAAAGAATCGACGTGAT
CGCCAAGAAGCTGTCCAACATAATGCTATTTGGGAAGGACACCTCGTTTG
AGGTGGCATCAACTATTGACCCGGAGTGAACCCGAACGCTGATTCGGTGA
CGAGCGAGACCCTCAGCGCGCTATGGATCCTGGAGTGGACTACTGAGCGA
GAGATATTGTTCTTGATGCAGAACGGCTTGCCTGGAAAGCCCTCCGGGCC
CGTTCAGCAAAGAATCGACGTGATCGCCAAGAAGCTGTCCAACATAATGC
TATTTGGGAAGGACACCTCGTTTGAGGTGGCATCAACTATTGACCCGGAG
GAATCAGGGCCTCGCGTGAATTTCGAATTCGAAGCCTGTAAGTTCAAGTA
TGGGGGCATCCAAGTACCCTTACCGCCGGTGGGAAAGGAATCAGGGCCTC
GCGTGAATTTCGAATTCGAAGCCTGTAAGTTCAAGTATGGGGGCATCCAA
GTACCCTTACCGCCGGTGGGAAAGGGCTGGTTCGAGAGCGTCTACCTCGA
CGAAGATTTGAGAGTGACACGGGACATTCGGGGCGATGTTTCCGTACTTG
TGAAGAGCAAAAGCTGAGGCTGGTTCGAGAGCGTCTACCTCGACGAAGAT
TTGAGAGTGACACGGGACATTCGGGGCGATGTTTCCGTACTTGTGAAGAG
CAAAAGCTGA
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