prot_H-elongata_contig193254.5357.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig193254.5357.1
Unique Nameprot_H-elongata_contig193254.5357.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7S3USU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USU6_HETAK)

HSP 1 Score: 79.0 bits (193), Expect = 1.480e-15
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+AT  DDETWKVWSVPNC+L++SGEGH +W+S V FHP GTML
Sbjct:    3 ILATVSDDETWKVWSVPNCDLVMSGEGHGSWLSAVDFHPSGTML 46          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7L0MNU5_9PSIT (SPG16 protein (Fragment) n=1 Tax=Amazona guildingii TaxID=175529 RepID=A0A7L0MNU5_9PSIT)

HSP 1 Score: 67.4 bits (163), Expect = 1.590e-12
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+ TGGDD  WK+W++P+  LI++GEGH +W+SG  FHP GT L
Sbjct:    1 IVVTGGDDHLWKMWALPDGNLIMTGEGHTDWLSGCCFHPSGTQL 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7S3U472_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U472_9SPIT)

HSP 1 Score: 71.6 bits (174), Expect = 1.650e-12
Identity = 25/44 (56.82%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            ++AT  DD TWK+WS+P  +L++SGEGH++WVSG+AFHP G+++
Sbjct:  250 VVATACDDHTWKMWSMPEGQLVLSGEGHKDWVSGIAFHPRGSLV 293          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A093I073_STRCA (Sperm-associated antigen 16 protein (Fragment) n=2 Tax=Struthio camelus australis TaxID=441894 RepID=A0A093I073_STRCA)

HSP 1 Score: 67.4 bits (163), Expect = 6.600e-12
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+ATG DD  WK+W  PN  +I++GEGH +W+SG  FHP GT L
Sbjct:    1 IVATGSDDRLWKIWGFPNGNIIMTGEGHTDWLSGCCFHPSGTQL 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7K8MXA6_CASCA (SPG16 protein (Fragment) n=1 Tax=Casuarius casuarius TaxID=8787 RepID=A0A7K8MXA6_CASCA)

HSP 1 Score: 66.2 bits (160), Expect = 1.200e-11
Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+ATG DD  WK+W+ PN  +I++GEGH +W+SG  FHP GT +
Sbjct:    1 IVATGSDDRLWKMWAFPNGNIIMTGEGHTDWLSGCCFHPSGTQM 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A851XJY3_EOLRO (SPG16 protein (Fragment) n=1 Tax=Eolophus roseicapilla TaxID=176039 RepID=A0A851XJY3_EOLRO)

HSP 1 Score: 64.3 bits (155), Expect = 6.690e-11
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+ TG DD  WK+W++P+  +I++GEGH +W+SG  FHP GT L
Sbjct:    1 IVVTGSDDHLWKMWALPDGNIIMTGEGHTDWLSGCCFHPSGTQL 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7K9V2L1_ANSSE (SPG16 protein (Fragment) n=3 Tax=Galloanserae TaxID=1549675 RepID=A0A7K9V2L1_ANSSE)

HSP 1 Score: 63.9 bits (154), Expect = 1.430e-10
Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            ++ TG DD  WK+W++P+  +I++GEGH +W+SG  FHP GT L
Sbjct:    1 VVVTGSDDRLWKMWALPDGNIIMTGEGHTDWLSGCCFHPSGTQL 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A851EDG4_9CORV (SPG16 protein (Fragment) n=1 Tax=Dryoscopus gambensis TaxID=85069 RepID=A0A851EDG4_9CORV)

HSP 1 Score: 62.4 bits (150), Expect = 1.450e-10
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+ TGGDD  WK W  P+  +++SGEGH +W+SG  F P GT L
Sbjct:    1 IVVTGGDDRLWKTWGFPDGNILMSGEGHTDWLSGCCFRPSGTQL 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7L3TQK0_URIAL (SPG16 protein (Fragment) n=1 Tax=Uria aalge TaxID=13746 RepID=A0A7L3TQK0_URIAL)

HSP 1 Score: 62.0 bits (149), Expect = 2.050e-10
Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            I+ TG DD  WK+W++P  ++I++GEGH +W+SG  FH  GT L
Sbjct:    1 IVLTGSDDHQWKMWALPRGDIIVTGEGHTDWLSGCCFHASGTQL 44          
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Match: A0A7L0JNA6_CHATO (SPG16 protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L0JNA6_CHATO)

HSP 1 Score: 62.0 bits (149), Expect = 2.050e-10
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    4 IIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTML 47
            ++ TG DD  WK+W++P+  +I++GEGH +W+SG  FHP G  L
Sbjct:    1 VVVTGSDDRLWKMWALPDGNIIMTGEGHTDWLSGCCFHPSGNQL 44          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193254.5357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3USU6_HETAK1.480e-1572.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7L0MNU5_9PSIT1.590e-1256.82SPG16 protein (Fragment) n=1 Tax=Amazona guildingi... [more]
A0A7S3U472_9SPIT1.650e-1256.82Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A093I073_STRCA6.600e-1256.82Sperm-associated antigen 16 protein (Fragment) n=2... [more]
A0A7K8MXA6_CASCA1.200e-1154.55SPG16 protein (Fragment) n=1 Tax=Casuarius casuari... [more]
A0A851XJY3_EOLRO6.690e-1152.27SPG16 protein (Fragment) n=1 Tax=Eolophus roseicap... [more]
A0A7K9V2L1_ANSSE1.430e-1050.00SPG16 protein (Fragment) n=3 Tax=Galloanserae TaxI... [more]
A0A851EDG4_9CORV1.450e-1052.27SPG16 protein (Fragment) n=1 Tax=Dryoscopus gamben... [more]
A0A7L3TQK0_URIAL2.050e-1050.00SPG16 protein (Fragment) n=1 Tax=Uria aalge TaxID=... [more]
A0A7L0JNA6_CHATO2.050e-1047.73SPG16 protein (Fragment) n=4 Tax=Neognathae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 21..60
e-value: 7.4E-10
score: 48.7
coord: 63..98
e-value: 0.94
score: 17.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 65..93
e-value: 0.008
score: 17.0
coord: 25..60
e-value: 3.7E-9
score: 37.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 28..69
score: 16.39
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..96
e-value: 1.0E-29
score: 105.5
NoneNo IPR availablePANTHERPTHR14604WD40 REPEAT PF20coord: 2..98
NoneNo IPR availablePANTHERPTHR14604:SF3SPERM-ASSOCIATED ANTIGEN 16 PROTEINcoord: 2..98
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 47..61
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..99
score: 23.097
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig193254contigH-elongata_contig193254:205..878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig193254.5357.1mRNA_H-elongata_contig193254.5357.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig193254 205..878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig193254.5357.1 ID=prot_H-elongata_contig193254.5357.1|Name=mRNA_H-elongata_contig193254.5357.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
TQAIIATGGDDETWKVWSVPNCELIISGEGHRNWVSGVAFHPHGTMLATG
AGDTTVKLWDFREARCAATFTDHTQAVWGVSFHHTGYFLASCSMYVTCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf