prot_H-elongata_contig193130.5351.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig193130.5351.1
Unique Nameprot_H-elongata_contig193130.5351.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
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BLAST of mRNA_H-elongata_contig193130.5351.1 vs. uniprot
Match: D7FP17_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP17_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 3.100e-11
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    5 FSPGRLRLVVGGGGLAPFLHRAVRQMEPGEAKVVGVPPKEAFGE 48
            F  GR++LVVGGGG APFLH AV +MEPGE K V VPPK+AFGE
Sbjct:   54 FDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGE 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193130.5351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP17_ECTSI3.100e-1172.73Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.80coord: 3..60
e-value: 6.0E-9
score: 37.4
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 10..54
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 10..55
e-value: 4.3E-6
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig193130contigH-elongata_contig193130:833..1027 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig193130.5351.1mRNA_H-elongata_contig193130.5351.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig193130 833..1027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig193130.5351.1 ID=prot_H-elongata_contig193130.5351.1|Name=mRNA_H-elongata_contig193130.5351.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
MVAGFSPGRLRLVVGGGGLAPFLHRAVRQMEPGEAKVVGVPPKEAFGERE
TKPSKHTLNLSLRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom