mRNA_H-elongata_contig193082.5350.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: A0A286UUM4_9AGAM (Restless-like protein n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UUM4_9AGAM) HSP 1 Score: 81.3 bits (199), Expect = 4.290e-15 Identity = 46/146 (31.51%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 4 LAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKG--TRLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCT--IACNDFPGSHTAERIAAKLTTVLKQYEIETSVVAITMDTAAN 429
L E+ I QP+ +VE +F ++ + ++ + +PS + + V E+ + +K +L+ +++AL+ D W+SNNG ++ + H+IS+ D C IA + G HT E I A + VL QY I T ++AI D A+N
Sbjct: 258 LLEWIISSDQPFTIVEDPTFRKFIEYTHYSQKPLSIPSATSIKRAVNEMKTLVFQNMKSVLENLTSKIALSLDAWSSNNGFAFVAIVVHYISD---DWLLCEQLIAFEEISGRHTGENIGAIIWKVLTQYNIATKLIAINCDNASN 400
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: A0A4Y2VCJ3_ARAVE (Zinc finger BED domain-containing protein 1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2VCJ3_ARAVE) HSP 1 Score: 72.0 bits (175), Expect = 1.030e-12 Identity = 46/153 (30.07%), Postives = 79/153 (51.63%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFL-----VHKRVGEIAQAAERKIKELLKGTRLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIETS-VVAITMDTAANIKKA 441
++ +F + QP+NVVE++SFNN+++ N + +VPS V K ++ ++ +R++ + + LTTD WTS Y+ VTAHFI + + + C F +HT+E I L +L + ++ + T D +NI KA
Sbjct: 16 SVTKFLVGTMQPFNVVESQSFNNMIKTLNPS---FKVPSRKFFSKTAVPKLYNDVTESIKRELASV-DSNNVCLTTDCWTSLATTPYIAVTAHFI-DTEWHLKSVCLCCTQFEENHTSENITQVLKDILSDWNLDAQEITCYTTDNGSNIVKA 163
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: UPI00073A1939 (zinc finger BED domain-containing protein RICESLEEPER 1-like n=1 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A1939) HSP 1 Score: 73.6 bits (179), Expect = 2.230e-12 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKGTRLALTTDIWTSNNGVTYMGVTAHFISE 276
A+AEF I+D+QP+ VVE E F L+ A E+PS +V + +I Q + K+K+L+K + +T+D WTS +TYM VTAH+I +
Sbjct: 151 AIAEFFIIDEQPFKVVEGEGFKKLMAKALPN---FELPSQVIVARHCLKIYQEEKEKLKKLVKNQHICITSDTWTSLQNLTYMVVTAHWIDD 239
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: A0A671XK97_SPAAU (BED-type domain-containing protein n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671XK97_SPAAU) HSP 1 Score: 73.2 bits (178), Expect = 2.420e-12 Identity = 45/147 (30.61%), Postives = 80/147 (54.42%), Query Frame = 1
Query: 4 LAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKGTRLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIET-SVVAITMDTAANIKKA 441
L F D +P NV+ F + E ++P + ++ ++ ++ + I+E+L+G +LALTTD W+S +++ VTAHFI E S ++ + ++ +HTA ++ + ++L+QY +E SV+AIT D A N A
Sbjct: 111 LTRFVCEDMRPVNVIYGSGFQAFVHEL---EPRFKIPCYRTMNSKITKLYDTTKGGIREMLRGEKLALTTDRWSSLATESHVIVTAHFIDEDS-EMRNVILDTSELQTAHTAANVSTCIDSILRQYHVERESVLAITTDNATNYVNA 253
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: A0A1A8J3D6_NOTKU (BED-type domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8J3D6_NOTKU) HSP 1 Score: 73.2 bits (178), Expect = 2.830e-12 Identity = 42/145 (28.97%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELL-KGTRLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIETSVVAITMDTAANI 432
AL + D QP+++V+ + F + + + T +PS + V + + K KE++ K ++LT+D+WTS + Y+ + HFI+E S ++T + FP +HTA IA L T+++++ I++ ++ + D AAN+
Sbjct: 48 ALVSMIVKDLQPFSIVDDKGFRAFISLLDPT---YVLPSRLALKSMVDARYKREKEKAKEIIQKAPAVSLTSDMWTSIHMDAYLAINCHFINE-SDELTSMLLTVRSFPENHTAANIAKVLATLMEEWNIQSKLMCLVTDGAANM 188
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: UPI0007AF74FB (zinc finger BED domain-containing protein RICESLEEPER 2-like n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AF74FB) HSP 1 Score: 72.4 bits (176), Expect = 3.060e-12 Identity = 49/145 (33.79%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKGT--RLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIETSVVAITMDTAAN 429
A+AEF ILD+ P+ VVE F+ ++ N E VPS ++ + ++K+K L + R+ LT+D WTSN ++YM +TAHF+ + R C +H E I ++ T L+++EIE V IT+D A++
Sbjct: 27 AMAEFIILDEHPFKVVEGIGFHKII---NRFEPRFTVPSKMIMSGDCFHLYLDEKKKLKAWLANSCARVCLTSDCWTSNQNLSYMSLTAHFVDDEWKLQKRILNFC--LIENHKGETIGREIETCLREWEIE-KVFTITLDNASS 165
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: A0A834LD78_RHOSS (BED-type domain-containing protein n=5 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LD78_RHOSS) HSP 1 Score: 73.2 bits (178), Expect = 3.200e-12 Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKGTRLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIETSVVAITMDTAAN 429
ALAE I+D+ P+ VE F +V VPS + + VG I K+K+LLKG R+ LTTD WTS + YM +TAHFI + R C +H E I K+ ++L ++++ + +T+D A++
Sbjct: 160 ALAEMVIIDELPFRFVEGIGFRRFCKVMQPKFS--PVPSRQTITREVGAIHNFERAKLKKLLKGRRICLTTDTWTSIQNLNYMCLTAHFIDDDWKLQKRILNFCQVV--NHKGETIGKKIESLLLDWKVD-GIFMLTVDNASS 297
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: UPI001C36531A (Uncharacterized protein n=3 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C36531A) HSP 1 Score: 72.4 bits (176), Expect = 5.980e-12 Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKGTRLALTTDIWTSNNGVTYMGVTAHFISE 276
ALAE I+D+ P+ VE ESF + V GI PS + K + ++ + K+K LKG R+ LTTDIWTS YM +TAHFI E
Sbjct: 137 ALAEMLIVDELPFRFVEGESFKKFMLVVQPRWDGI--PSRITIAKDIYKLFLREKDKLKSALKGQRICLTTDIWTSVQNFNYMCLTAHFIDE 226
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: UPI000DEDE970 (zinc finger BED domain-containing protein RICESLEEPER 2-like n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DEDE970) HSP 1 Score: 72.0 bits (175), Expect = 8.270e-12 Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 1
Query: 1 ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIAQAAERKIKELLKGT--RLALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIETSVVAITMDTAANIKKAGTQL 453
++AEF +LD+ P+ VVE F +L N E VPS V + ++ ++K+KE L + R+ LTTD WTSN TYM +TAHF+ E R C +H + + ++ L+++ IE V IT+D A + A T L
Sbjct: 149 SVAEFVVLDEMPFKVVEGIGFRRML---NRFEPRFTVPSRMTVSRDCFQLYLDEKKKLKEWLAKSCARVCLTTDCWTSNQNYTYMSLTAHFVDEEWMLQKRIINFCQI--ENHKGDTVGREIEKCLREWGIE-KVFTITVDNATSNDGAITYL 295
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Match: A0A2C9LWQ6_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LWQ6_BIOGL) HSP 1 Score: 71.6 bits (174), Expect = 9.270e-12 Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 1
Query: 4 LAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPS-HFLVHKRVGEIAQAAERKIKELLKGTR-LALTTDIWTSNNGVTYMGVTAHFISEGSADITRCTIACNDFPGSHTAERIAAKLTTVLKQYEIETSVVAITMDTAANIKKAGTQL 453
L + D QP ++V+ + F L+ + + PS H + + ++ A ++ +L T +ALTTDIW+SN V Y+ VTAHFI+ S +T + G HTAE IA+KL V + + I ++ + D AN+ +A T +
Sbjct: 195 LVSMIVSDLQPLSLVDDKGFLKLIYELDSK---YQPPSRHTISRILIPDLYSKARSELMSILSTTSSVALTTDIWSSNQSVAYLTVTAHFITP-SFKLTSAVLTTTTLNGDHTAENIASKLIQVTEDWAITDKLLVVLTDNTANMMRAVTDI 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193082.5350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig193082.5350.1 >prot_H-elongata_contig193082.5350.1 ID=prot_H-elongata_contig193082.5350.1|Name=mRNA_H-elongata_contig193082.5350.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp ALAEFAILDQQPYNVVEAESFNNLLQVANCTEGGIEVPSHFLVHKRVGEIback to top mRNA from alignment at H-elongata_contig193082:378..1116+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig193082.5350.1 ID=mRNA_H-elongata_contig193082.5350.1|Name=mRNA_H-elongata_contig193082.5350.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=739bp|location=Sequence derived from alignment at H-elongata_contig193082:378..1116+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig193082:378..1116+ >mRNA_H-elongata_contig193082.5350.1 ID=mRNA_H-elongata_contig193082.5350.1|Name=mRNA_H-elongata_contig193082.5350.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=906bp|location=Sequence derived from alignment at H-elongata_contig193082:378..1116+ (Himanthalia elongata Himel1 dioecious)back to top |