prot_H-elongata_contig193060.5348.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig193060.5348.1
Unique Nameprot_H-elongata_contig193060.5348.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
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BLAST of mRNA_H-elongata_contig193060.5348.1 vs. uniprot
Match: A0A6H5JK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK08_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 2.930e-11
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:   10 RYNACCEVMQALLRCGANVRARDTAGEHPLHVASLYLADQTVDLLLR 56
            RYNACC+V+  LLR GA + AR++AGE+PLH+A+ YLAD+ VDLLLR
Sbjct:  424 RYNACCDVVLELLRRGAKMDARESAGEYPLHMATQYLADEIVDLLLR 470
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BLAST of mRNA_H-elongata_contig193060.5348.1 vs. uniprot
Match: D7FXM2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM2_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 8.310e-10
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    9 ARYNACCEVMQALLRCGANVRARDTAGEHPLHVASLYLADQTVDLLLR 56
            AR N CC+V+  LLR GA + AR++AGE+PLH+A+ YLAD+ VD LLR
Sbjct:  292 ARCNTCCDVVLELLRRGAKMDARESAGEYPLHIATQYLADEIVDFLLR 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig193060.5348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK08_9PHAE2.930e-1165.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXM2_ECTSI8.310e-1060.42Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..58
e-value: 7.1E-10
score: 40.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..56
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..58
score: 12.779

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig193060contigH-elongata_contig193060:399..575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig193060.5348.1mRNA_H-elongata_contig193060.5348.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig193060 399..575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig193060.5348.1 ID=prot_H-elongata_contig193060.5348.1|Name=mRNA_H-elongata_contig193060.5348.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
SCIFLAVVARYNACCEVMQALLRCGANVRARDTAGEHPLHVASLYLADQT
VDLLLRYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom