mRNA_H-elongata_contig1930.5341.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: D8LRT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT3_ECTSI) HSP 1 Score: 389 bits (998), Expect = 2.590e-130 Identity = 193/251 (76.89%), Postives = 212/251 (84.46%), Query Frame = 1
Query: 181 RLPETFDFSSLSIVCNARRCFNGEQETALGVPTVNNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSS-YSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILR 930
++ + DFS L +C ARR FN Q+ ALG+PT NNF+KGA FSPDGTCLLTSSDDTVLRVFEVP A + K +AP + D++ S+ + DDWSPCL SVEGETVYDFAWYP MSS+EPATSVFVSTSRDHPLH+WDAFTGNLRATYRAYDHLDEVVAANSVCFNT G KIFAGYNRMIR+FDV+QPGRSFEARPTCKTRKSK GQRGIISALAFCP+S GGGLFAAGSYAKTICLYSENRQ R
Sbjct: 26 KVSGSLDFSFLRPLCVARRTFNSRQDVALGLPTANNFLKGASFSPDGTCLLTSSDDTVLRVFEVPGHALRGEKRQAP--SDTVDDAASSAHFDITDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGGKIFAGYNRMIRIFDVSQPGRSFEARPTCKTRKSKTGQRGIISALAFCPESSGGGLFAAGSYAKTICLYSENRQSCTR 274
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: A0A8K1FL14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL14_PYTOL) HSP 1 Score: 343 bits (879), Expect = 1.320e-110 Identity = 189/406 (46.55%), Postives = 244/406 (60.10%), Query Frame = 1
Query: 109 QEMEVDDCILP-QAGERDDSEGTVARLPETFDFSSLSIV---CNARRCFNGEQETALGVPTVNNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHPYAAL--LGVCTGQRHFHV 1308
+EM VD Q+G +D E A P F++ + + V A FNG G NNF KG SPDG C+LTSS+D +LR+FE+P S + + L + EG VYD+AWYP M+S +PAT +F+STSRDHP+H+WDA+TG LRATYRA+DHLDE+ AA SV FN G KIFAGY+RMIR FD+ QP R F +RP CKTRKS+ GQRGIIS L F PD ++AAGSY T C+Y+E+ G L GIT +QFSPDG LF+GAR+D I CWDIR++ +++ +F R+A+TNQR+ FD+ TG YLATGS D + L+YD+ + V +PDAV V F P A + V TGQRH+ +
Sbjct: 17 EEMAVDTNTTDVQSGAMEDGELPSAETPSFFEYDARTPVKSLLTASHEFNGMNHAVSGH---NNFTKGVKVSPDGLCMLTSSEDHILRIFELP-----------------------SEENADVEQLSILQAKEGGAVYDYAWYPYMTSQDPATCIFISTSRDHPIHMWDAYTGQLRATYRAFDHLDEITAAFSVAFNATGDKIFAGYDRMIRFFDITQPSRDFVSRPLCKTRKSRDGQRGIISTLHFNPDH--SKIYAAGSYNGTTCIYTEDT-----GEELLCLRDHDGHGITQVQFSPDGRYLFTGARRDGSIHCWDIRQSVQVVQSFTRQAETNQRVEFDLHCTGRYLATGSRDGRALLYDVSTGELVDENIRMPDAVNGVSFFPDATRGRVAVTTGQRHYDL 389
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: K3WVC6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVC6_GLOUD) HSP 1 Score: 330 bits (846), Expect = 4.960e-106 Identity = 182/397 (45.84%), Postives = 237/397 (59.70%), Query Frame = 1
Query: 250 EQETALGVPTVNNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHP--YAALLGVCTGQRHFHVDTGDGSDXXXXXXXGNAGDSSLATIARVPWRNGVGIYQFGAG 1434
+Q+ + + NNF KG SPDG C+LT+S+D VLR+FE+ +AP + L + EG VYDFAWYP M+S P + +FVSTSRD P+H+WDA+TG+LRATYRAYDHLDE+ AANS+ FNT G KIF G++RMIR FD++QP R F+ARP KTR+S+ GQRGIIS + F PD ++AAGSY T C+Y+E+R G L GIT +QFSPDG LF+ AR+DS I CWDIR + +IL+TF R ADTNQRI FD+ G YLA+GS D +VL+YD+ + V LPDA V F P AA + V +GQRH+ + D + RV RN + +Y++ G
Sbjct: 28 QQQRSPSLSAFNNFTKGVKVSPDGLCMLTNSEDHVLRLFEMSDDV------QAPAA------------------TSILQAKEGGAVYDFAWYPFMNSQVPESCIFVSTSRDQPVHMWDAYTGDLRATYRAYDHLDEIAAANSIAFNTTGDKIFCGFDRMIRFFDISQPSRDFKARPLSKTRRSREGQRGIISTIHFNPDH--SKIYAAGSYGGTTCIYTEDR-----GEELLCLRDHDGKGITQVQFSPDGRFLFTAARRDSRIHCWDIRNSNQILYTFHRIADTNQRIEFDLHCAGRYLASGSQDGKVLLYDLLTGELVDDGVRLPDAANGVSFFPDPSAARVAVTSGQRHYDLPPDMEDDDE--------------VVKRVESRNALHVYEYNGG 379
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: A0A7S2GDB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDB9_9STRA) HSP 1 Score: 327 bits (839), Expect = 3.460e-105 Identity = 178/372 (47.85%), Postives = 223/372 (59.95%), Query Frame = 1
Query: 274 PTVNNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFAT-------PTIGGITHLQFSPDGTSLFSGARKD-----SDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHPYAALLGVCTGQRHFHV--------DTGDGSD 1329
P++N+F KG +SPDGTC+L++ D L ++E+P S ST+ WSP L EGETVYD+ WYP M S +P T VF STSRDHP+HLWDAFTG +RATYRAYDHLDE VAA S+ F+ GT++ AGYNR +RVFD+A PGR RPT +RK+K GQRGIISALA P+S L+AAGSY+++I LY + G+ E T IGG+T LQFS DG LFSG+R+ S ++CWD+R+TGE+L ++ R A T QRI FD+D TG YL TG + VYD+ S A V D V V FHP LL + TG RH +TGDG D
Sbjct: 3 PSLNHFTKGVAWSPDGTCILSADDSNALNLYELP-----------------------SDGSTQ--WSPVLAPREGETVYDYKWYPHMRSDQPVTCVFASTSRDHPIHLWDAFTGTIRATYRAYDHLDENVAAYSMAFSEDGTQLLAGYNRCVRVFDLAHPGRPISDRPTSASRKAKTGQRGIISALAVAPES---SLYAAGSYSESIVLYD-----LRSGKCRLEMETCCHDTGASIIGGVTQLQFSRDGRFLFSGSRRGHTPDASHVICWDVRQTGEMLASYPRDASTYQRIQFDLDPTGRYLVTGDEGGKAKVYDLTSGAVVKEYPRQGDVVNGVSFHPTLPLLAISTGTRHADTADVVQDSAETGDGMD 341
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: A0A835ZF69_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF69_9STRA) HSP 1 Score: 328 bits (841), Expect = 1.890e-104 Identity = 191/426 (44.84%), Postives = 249/426 (58.45%), Query Frame = 1
Query: 133 ILPQAGERDDSEGTVARLP-ETFDFSSLSIVCNARRCFNGEQETALG-VPTVNNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGY-NRMIRVFDVAQPGRSFEARPTC-KTRKSKV-GQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVIL-------------RGRALAEFATP---TIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHPYAALLGVCTGQRHF------HVDTGDGSD 1329
+L E+D+ V + P + +DFSS +VC A F+G A +P NNFVK FSPDGTCLL +S+D LR++E AP D SS S W CL EGET+Y AWYP MSS+ PA+ FV+T+RDHPLHLW A+TG LRATYR YDHLDE+ +A SV FN GT I+ G+ +R +D+ +PGR ++ R T K +K + GQ G+ISALAF PD G GLFAAG+Y++++CLY E+ +G + +P +GG+T L++ PDG LFSG R D +VCWD+R L TF R A TNQR D+D++G YL TG++D V+++ S A V AL +LPDAVG V F P A LL V TGQRHF V GDG++
Sbjct: 20 VLQYNQEQDEXXXXVQQQPLQQWDFSSRRVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYE----------------APDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPD--GSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPLLAVATGQRHFPQCDDDEVHGGDGTE 427
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: A0A662X8T5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8T5_9STRA) HSP 1 Score: 325 bits (832), Expect = 2.670e-103 Identity = 182/389 (46.79%), Postives = 235/389 (60.41%), Query Frame = 1
Query: 283 NNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHP--YAALLGVCTGQRHFHVDTGDGSDXXXXXXXGNAGDSSLA----TIARVPWRNGVGIYQFGA 1431
NNF KG SPDG CLLT+SDD VLR+FE+ S S L + EG TVYD+AWYP MSSA P++ +FVSTSRDHP+HLWDA+TG LRA+YR++DHLDE+ +A SV FN G K+FAG++RMIR FD++QP R F ARP KTR+S+ GQRG+IS+L F PD ++AAGSYA T C+Y+E+ G L GI+ ++FSP G L++ AR+D I CWDIR T +ILHTF R AD+NQR+ FD+ G YLATGS +VL+YD ++ A + LPD V F P A L V +GQRH+ + SD G+A D ++ T R P+RN + +Y F A
Sbjct: 79 NNFTKGVKVSPDGLCLLTNSDDHVLRLFEM-------------------------SSDQSQPHSSILQAREGGTVYDYAWYPFMSSANPSSCIFVSTSRDHPVHLWDAYTGALRASYRSFDHLDELASAQSVAFNATGDKLFAGFDRMIRFFDLSQPSRDFHARPLSKTRRSRKGQRGLISSLHFNPDF--SKIYAAGSYAGTTCVYTEDE-----GEELLALRDHDGRGISQVRFSPCGRFLYTAARRDPSIHCWDIRATNQILHTFHRVADSNQRVEFDVHCGGKYLATGSRSGRVLLYDTQTGALLDERIQLPDCANGVSFFPDPSRATLAVSSGQRHYDLP----SDMQVEEEDGDA-DKAVEIADKTDGRPPYRNLLQVYDFQA 430
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: M4C337_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C337_HYAAE) HSP 1 Score: 321 bits (822), Expect = 4.140e-102 Identity = 170/344 (49.42%), Postives = 219/344 (63.66%), Query Frame = 1
Query: 283 NNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHPYA--ALLGVCTGQRHFHV 1308
NNF KG SPDG CLLT+SDD +LR+FEV + E + SS S L + EG TVYD+ WYP MSSA+P + +FVSTS+D P+HLWDA+TG LRATYRA+DHLDE+ +A+S+ FN GTK+FAG++RMIR FD++QP R F ARP KTR+S+ GQRG+IS L F PD ++AAGSY T C+Y+E+ G L GI+ ++FSP G L++ AR+D+ I CWDIR T EI HTF R ADTNQR+ FD+ G YLA GS +V++YD+ + + LPD V V F P A A + VC+GQRHF +
Sbjct: 45 NNFTKGVKVSPDGLCLLTNSDDHILRLFEV------------------HSEQKQSSTSL-------LQAEEGGTVYDYEWYPFMSSADPTSCIFVSTSQDQPVHLWDAYTGELRATYRAFDHLDELTSAHSLAFNATGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSRNGQRGLISTLHFNPDH--SKIYAAGSYGGTTCVYTEDE-----GEELLTLCDHDGRGISQVRFSPCGRFLYTTARRDARIHCWDIRATKEICHTFNRVADTNQRLEFDLHCGGRYLAAGSRTGRVMLYDVLTGELLDESIRLPDCVNGVSFFPNASRATIAVCSGQRHFDL 356
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: A0A0P1A8N8_PLAHL (Guanine nucleotide-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8N8_PLAHL) HSP 1 Score: 320 bits (819), Expect = 6.640e-102 Identity = 172/359 (47.91%), Postives = 223/359 (62.12%), Query Frame = 1
Query: 241 FNGEQETALGVPTV-NNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHP--YAALLGVCTGQRHFHV 1308
F +E + P+ NNF KG SPDG CLLT+SDD VLR+FEV + D + L EG +YDF WYP MSSA+P + +FVSTSRD P+HLWDA+TG LRA+YRA+DH+DE+ +A+S+ FNT GTK+FAG++RMIR FD++QP R F+ARP KTR+S+ GQRG+IS L F PD ++AAGSYA T C+Y+E++ G L GIT ++FSP G LF+ AR+D+ I CWDIR + EILHTF R ADTN RI FD+ G YLATGS V++YD+ + A + LPD V F P A+L V +GQRH+ +
Sbjct: 30 FTASKEFSFTSPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEV---------------------------CNEFDSTSLLQCKEGNAIYDFEWYPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELTSAHSLAFNTTGTKLFAGFDRMIRYFDLSQPSRDFQARPLSKTRRSRDGQRGLISTLDFNPDH--SQIYAAGSYAGTTCVYTEDK-----GEELLTLRDHGGRGITQVKFSPCGRFLFTAARQDAQIHCWDIRASNEILHTFNRVADTNLRIEFDLHCGGKYLATGSRSGCVMLYDVMTGALLNENIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDL 354
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: A0A6A3FPX2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FPX2_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.170e-101 Identity = 168/344 (48.84%), Postives = 217/344 (63.08%), Query Frame = 1
Query: 283 NNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHP--YAALLGVCTGQRHFHV 1308
NNF KG SPDG CLLT+SDD LR+FEV A Q S L + EG TVYD+ WYP MSSA+P + +FVSTSRD P+HLWDA+TG LRA+YRA+DH+DE+ +A S+ FN+ GTK+FAG++RMIR FD++QP R F ARP KTR+S+ GQRG+IS L F PD ++AAGSY T C+Y+E+ G L GI+ ++FSP G LF+ AR+D+ I CWDIR T EILHTF R ADTNQR+ FD+ G YLATGS +V++YD+ + + LPD V F P Y A++ V +GQRH+++
Sbjct: 49 NNFTKGVKVSPDGLCLLTNSDDHTLRLFEVSGDASQSS-------------------------SSILQAREGGTVYDYQWYPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRYFDLSQPSRDFRARPLTKTRRSRKGQRGLISTLHFNPDH--SKIYAAGSYGGTTCVYTEDE-----GEELLALRDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNQRVEFDLHCGGRYLATGSQTCRVMLYDVLTGELLDQSIRLPDCANGVSFFPDPYRAIVAVSSGQRHYNL 360
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Match: V9EU12_PHYPR (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=V9EU12_PHYPR) HSP 1 Score: 319 bits (818), Expect = 1.290e-101 Identity = 180/398 (45.23%), Postives = 234/398 (58.79%), Query Frame = 1
Query: 241 FNGEQETALGVPTV-NNFVKGAMFSPDGTCLLTSSDDTVLRVFEVPHGAFQKVKPEAPVCAPKYDESRVSSYSTKDDWSPCLVSVEGETVYDFAWYPQMSSAEPATSVFVSTSRDHPLHLWDAFTGNLRATYRAYDHLDEVVAANSVCFNTFGTKIFAGYNRMIRVFDVAQPGRSFEARPTCKTRKSKVGQRGIISALAFCPDSYGGGLFAAGSYAKTICLYSENRQVILRGRALAEFATPTIGGITHLQFSPDGTSLFSGARKDSDIVCWDIRRTGEILHTFGRKADTNQRIMFDIDSTGHYLATGSTDSQVLVYDIESQAQVGALENLPDAVGSVCFHP--YAALLGVCTGQRHFHVDTGDGSDXXXXXXXGNAGDSSLATIARVPWRNGVGIYQF 1425
F +E + P+ NNF KG SPDG CLLT+SDD VLR+FE+ S D + L + EG TVYD+ WYP MSSA+P + +FVS SRD P+HLWDA+TG LRA+YRA+DH+DE+ +A S+ FN+ GTK+FAG++RMIR FD++QP R F ARP KTR+S+ GQRG+IS L F PD ++AAGSYA T C+Y+E+ G L GI+ ++FSP G LF+ AR+D+ I CWDIR T EILHTF R ADTN RI FD+ G YLATGS +V++YD+ + A + LPD V F P A+L V +GQRH+ + D D G D + T RN + +Y F
Sbjct: 31 FTASKEFSSASPSCSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------------------------SNASDSTSLLQAKEGGTVYDYEWYPFMSSADPNSCIFVSASRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDRMIRFFDLSQPSRDFRARPLSKTRRSRKGQRGLISTLHFNPDH--SKIYAAGSYAGTTCVYTEDE-----GEELLALRDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNLRIEFDLHCGGRYLATGSRTGRVMLYDVLTGALLDESIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPE-DMQDEDEAVADGI--DVDMKTTVNSQVRNVLQVYDF 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1930.5341.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1930.5341.1 >prot_H-elongata_contig1930.5341.1 ID=prot_H-elongata_contig1930.5341.1|Name=mRNA_H-elongata_contig1930.5341.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=470bp MNFDGIVKDTILHFPPGSVGEQEMEVDDCILPQAGERDDSEGTVARLPETback to top mRNA from alignment at H-elongata_contig1930:6151..9236- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1930.5341.1 ID=mRNA_H-elongata_contig1930.5341.1|Name=mRNA_H-elongata_contig1930.5341.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3086bp|location=Sequence derived from alignment at H-elongata_contig1930:6151..9236- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1930:6151..9236- >mRNA_H-elongata_contig1930.5341.1 ID=mRNA_H-elongata_contig1930.5341.1|Name=mRNA_H-elongata_contig1930.5341.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2820bp|location=Sequence derived from alignment at H-elongata_contig1930:6151..9236- (Himanthalia elongata Himel1 dioecious)back to top |