mRNA_H-elongata_contig19296.5339.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: D8LIG8_ECTSI (DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG8_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 3.800e-193 Identity = 343/588 (58.33%), Postives = 385/588 (65.48%), Query Frame = 1
Query: 1 QVTMAQFEELLRSEASRFWVRRRARSLLHEALSEEQAGDLGSAEARCAASLTAWPAFAAGHLKMAQILRAGGASEQASETPPQNPCKYSSRAIRDVEFHLKQALSATVSVPEEERGNEEEGGVAQVATERLSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPLPG-AHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVP--------PPLPREDVINVEGRQVAGGSGSDDSA--RVTWMVAFWRDIQARP---RTLPLPSPLTPLASATPE-------RTIPPTPSGXXXXXXXXXXXXX-------GRRKVKVKGTNPTWPTLFRKKPEGW--------GGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
QV+M+QFE L+R EA+ F RRRA SLL AL EEQ G+L +AEA CAA L+AWP A+GHLKMA+ILRA G S Q RAI+DVEFHL+QAL + ++G E VAQ A ERLSLLL QEGR++EAA +LKR GFRYRLS+D+LRYPLP A P AVE + SS +S + EG R + +G + D +FV+AVD ALP MLRHLQE FGS+SRFWSEHGYNSETG+PGYFSYIH L P TSIEQVI RV+ LAE+ FP VKEA+FVEWWAHRRPHSSGHQ+HFDSDNEG GG+RNPIVS VVYVTGDVGGPTLVTTQRL SKRLADRGWIVHPR+NRVCMFDGGVLHGVIPGRGVP P P ED G+ V +D A RVTWMVAFWRDIQARP + P P+ TP T R P PSG GRR P+WP LFRKKPEGW GG G E PV PVAV VWEDVD +N R G+GVRRLKRLPEYDLCFQGF
Sbjct: 220 QVSMSQFEGLVRKEAAGFSARRRAASLLRRALEEEQEGNLDAAEAGCAACLSAWPRCASGHLKMAKILRARGVSHQ--------------RAIKDVEFHLRQALGSASKPGGGDQGEE----VAQAAAERLSLLLCQEGRNKEAAKVLKRHGFRYRLSADVLRYPLPPQAKPPTAVEESGNGHTLAKKSSPEARKDS-KAEGGRRSDGKGDSGGD-DASEFVAAVDGALPPGMLRHLQEAFGSRSRFWSEHGYNSETGSPGYFSYIHRLGGAPTTSIEQVINRVRLLAERSFPEVKEAKFVEWWAHRRPHSSGHQMHFDSDNEGLGGVRNPIVSVVVYVTGDVGGPTLVTTQRLTSKRLADRGWIVHPRVNRVCMFDGGVLHGVIPGRGVPVTETPTHPTPPPEED-----GQGVGCEEVKEDRAGMRVTWMVAFWRDIQARPPPSQQSPAPTATTPAEEKTASTRGEAGIRRRQPPPSGAGAAQPFPAMPPLASGNPNGGRRCSSAAVAGPSWPALFRKKPEGWDEDTAGVDGGGGARE-----VPVVPVAVPHVWEDVDPADNKRAGVGVRRLKRLPEYDLCFQGF 777
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A7S4LBU0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LBU0_9EUGL) HSP 1 Score: 263 bits (672), Expect = 9.220e-79 Identity = 153/339 (45.13%), Postives = 190/339 (56.05%), Query Frame = 1
Query: 646 DVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVT-GDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRD-IQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKKPEGWGGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
+ ++V AV+ LP +ML+ + + F S FW EH Y+ ET YFS++H L PP+ S++QV+ + A A + FP KEA+F EWWAH RPH SGHQLHFDS +EGRGG+RNPIVS+V+Y+T D+GGPTLVT QRL K LA GW+V P++NR CMFDGGVLHGVIPGR P G+ RVT+M AFW+D + ARP+ P P P P K ++ WPTLF+ +PE G EP PV PV RVWEDVD EN R V L LP YD+CFQGF
Sbjct: 33 EAHQYVVAVEDVLPKSMLQQMMQGFQRDSAFWREHHYDCETSD--YFSFLHPLTGPPQNSLDQVLQLLHAEACKHFPQAKEAKFAEWWAHCRPHPSGHQLHFDSADEGRGGVRNPIVSSVLYLTVEDIGGPTLVTRQRLKDKTLARDGWMVFPKLNRYCMFDGGVLHGVIPGRSYP----------------KDGACEAGCRRVTFMAAFWKDSVTARPQVNGTPGAAEPF----------PDPD-----------------KCLLQ-----WPTLFKIRPE----PGRRAPEPVKAPVVPVP--RVWEDVDERENERRRQSVAGLTALPPYDVCFQGF 315
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A836BAS6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BAS6_9CHLO) HSP 1 Score: 267 bits (683), Expect = 1.870e-76 Identity = 174/426 (40.85%), Postives = 219/426 (51.41%), Query Frame = 1
Query: 391 LSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPLPGAHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDR--PPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKKPEGWGGSGEGESEPETCPVT--PVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
L++LL Q GRD EAA IL+ F +RL+ +L YPL S A T A+SG PSP G+E ++ +AVD ALP +LR L+ SR+W++HGY G GYFSY+H L P +++ ++ L RFPAV++A++ EWWAH R H SGHQLHFDSD+EG GG+RNPIVS+V+Y+TG+VGGPTLVT Q LG LADRGW++HPR NR+ MFDG LHGVIPGRG P R+T MVAFWRDIQ RPRT LP P P + P + + + TW P+G GG G+ T PV P + RVWE VDG + G +YD CFQGF
Sbjct: 290 LAMLLCQAGRDREAAPILRSLDFTHRLARPVLHYPLDPLL-STAAPATPAALPPAAAASGGPSP---------------PYGHE----RYCAAVDGALPPALLRVLRAALAPGSRYWAQHGY----GRVGYFSYMHELGSGAPHLSAVHDAAVLLQRLVAARFPAVQDAKYAEWWAHCRRHPSGHQLHFDSDDEGAGGVRNPIVSSVIYLTGEVGGPTLVTPQTLGGP-LADRGWLIHPRENRLAMFDGAFLHGVIPGRGASP--------------------HPSQHRITLMVAFWRDIQCRPRTDGLPGPSQPFPGSLPSQXXXXXXAAGPAPDAAVGGADGTAGRY-------TWMADLPPHPDGPGGWGD------TNPVDALPTPIPRVWECVDGGGEAQPGA--------VQYDACFQGF 649
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A2K3DHT9_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DHT9_CHLRE) HSP 1 Score: 259 bits (661), Expect = 2.390e-73 Identity = 180/427 (42.15%), Postives = 227/427 (53.16%), Query Frame = 1
Query: 391 LSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPLPGAHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPLASATP---ERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGT--NPTWPTLFRKKPEGWGGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
L++LL Q GRD EAA +L+ F +RL+ +L YPL + + T+ + G G+E ++ +AVD ALP +L L+ SR+W++HGY G GYFSY+H L P +++ + LA RFPAV+EA++ EWWAH R H SGHQLHFDSD+EG GG+RNP+VS+V+Y+TG+VGGPTLVT Q LG LADRGW++HPR NR+ MFDG LHGVIPGRG P + R+T MVAFWRDIQ RPRT LP P P + P + XXXXXXXXXXXXX GT TW + PE G G G + P TP+ RVWE VDG E + +YD CFQGF
Sbjct: 278 LAMLLCQAGRDREAAPVLRALDFTHRLARPVLHYPLDPLLSTASPSTSAXXXXXXXSGPG-------------------PHGHE----RYCAAVDCALPPALLGVLRAALAPGSRYWAQHGY----GRVGYFSYMHELGSPHLSAVHDAAVLLHRLAAARFPAVREAKYAEWWAHCRRHPSGHQLHFDSDDEGAGGVRNPVVSSVIYLTGEVGGPTLVTPQTLGGP-LADRGWLIHPRQNRLAMFDGSFLHGVIPGRGASPHPAQH--------------------RITLMVAFWRDIQCRPRTDGLPGPSQPFPGSAPAACDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTAGRYTWMSDLPPHPE--GPDGWGSTNPVDALPTPIP--RVWECVDGGEAQPGAV---------QYDACFQGF 643
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A836BSN9_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BSN9_9CHLO) HSP 1 Score: 249 bits (635), Expect = 6.370e-70 Identity = 177/441 (40.14%), Postives = 225/441 (51.02%), Query Frame = 1
Query: 343 RGNEEEGGVAQVATERLSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPL-PGAHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRD--IQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKKPEGWGGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
R EE G A A L++LL QEGRD+EA +L F +RL+ +L YPL P P+ + SSG +P G+E +++ AV+ ALP +L L++ SR+W+EHGY G GYFSY+H L P +++ Q + A+A QRFP V AR+ EWWAH R H +GHQLHFDSD+EG GG+RNPIVS V+Y++G VGGPTLVT Q LG LA GWIVHPR NR+ +FD LHGVIPGRG P P+P GG R+T M+AFWRD I+ RPRT LP P P + E PS GR TW P+ G +G G ++P P + RVWE +DG ++ G V YD CFQGF
Sbjct: 250 RREAEEQGPA--AKRSLAMLLCQEGRDKEAEPLLASLDFTHRLARPVLHYPLDPSLFPAAS-------------SSGPDAPAPA------------GPGHE----RYLRAVEDALPPQLLGVLRKALSPGSRYWAEHGY----GRVGYFSYMHELGSPDLSAVHQAARLLHAIAVQRFPEVANARYAEWWAHCRRHPAGHQLHFDSDDEGVGGVRNPIVSCVIYLSGGVGGPTLVTPQLLGGP-LAPHGWIVHPRDNRLGIFDAAHLHGVIPGRG-PSPVP-------------GGY------RITLMIAFWRDGDIKCRPRTDGLPGPSQPFPGSLAEGEG--APSASVPGGVGGADGSRGRY---------TWMQDLAPHPD--GPAGWGTTQPYDA--VPYDIPRVWEAIDGAA-IQAGAAV-------SYDACFQGF 611
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: C1FJT7_MICCC (DNA glycosylase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJT7_MICCC) HSP 1 Score: 249 bits (637), Expect = 6.930e-70 Identity = 173/455 (38.02%), Postives = 224/455 (49.23%), Query Frame = 1
Query: 397 LLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPLP-GAHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLD----------RPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRG--GIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKK-----------------PEGWGGSGEGESEPET------CPVTPVAVLRVWEDVDGTENMR--DGLGVRRLKRLPEYDLCF 1647
LL + RD++A L+ G+RYRLS ++LRY L GA P K+ A+ GK+V A D A+P + L HL+ VF ++S+FWS+HGY+ E G G+FSY H L P ++++ ++ RV +A FP +EA EWWAH RPH SGHQLHFDSD+EG+G GIR+PI SAVV+VTGDVGGPTLVT Q SK+LA RGW+V P RV +FDG LHGV+PGRG P LPR V G S D+ R+T MVAFW +++ARP + P + P G R + K WP LF EG G +G G ++PE C TPV RVW+DVD EN L + ++ +P YD CF
Sbjct: 247 LLCQSDHRDDDAVEELRSMGYRYRLSEEVLRYDLDYGAKV--------PRNKKAKAAMAA-------------------------HGKYVRAFDGAMPASALSHLRSVFRAESQFWSQHGYH-EPGC-GFFSYAHRLPPWNAEDVGNTHPLRSTMDAIVRRVWRVAAAAFPRAREATAAEWWAHCRPHGSGHQLHFDSDDEGKGPEGIRHPICSAVVFVTGDVGGPTLVTDQTAASKKLAQRGWLVEPVAGRVAVFDGRYLHGVVPGRGPAPRLPRNHVGRAAGFSPC--SSDRDARRITLMVAFWDEMKARPGG----------DGSDPRASF---PKGSARPFPDPKLYLGDRSRPK----GIDWPELFHAMHLTSMPDVVAEAATGDGDEGGGTAGGGGAKPEQTRWVERC-ATPVG--RVWQDVDEAENDACFPSLALEKISSVPPYDRCF 644
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A835VUZ4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VUZ4_CHLIN) HSP 1 Score: 250 bits (639), Expect = 1.860e-69 Identity = 146/337 (43.32%), Postives = 180/337 (53.41%), Query Frame = 1
Query: 655 KFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKKPEG---WGGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
++ +AVD ALP +L L+ SR+W++HGY G GYFSY+H L P +++ + + RFPAV+ A++ EWWAH R H SGHQLHFDSD+EG GG+RNP VS+V+Y+TG+VGGPTLVT Q+LG LADRGW+VHPR NR+ MFDG LHGVIPGRG P RVT MVAFWRDIQ RPRT LP P P + P PPT + GR TW P+G WGG+ ++ P P RVWE VDG E + +YD CFQGF
Sbjct: 447 RYCAAVDGALPPPLLAVLRAALAPGSRYWAQHGY----GRVGYFSYMHELGSPHLSAVHDAAVLLHRIVAARFPAVRGAKYAEWWAHCRRHPSGHQLHFDSDDEGAGGVRNPFVSSVIYLTGEVGGPTLVTPQKLGGP-LADRGWLVHPRENRLAMFDGSFLHGVIPGRGASP--------------------HPGQHRVTLMVAFWRDIQCRPRTDGLPGPSQPFPGSAP--AAPPTAAATDAAVVGGADGTAGRY---------TWMADLPPHPDGPDGWGGTNPVDALPTPIP-------RVWECVDGGEAQPGAV---------QYDACFQGF 731
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A250X892_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X892_9CHLO) HSP 1 Score: 251 bits (641), Expect = 2.560e-69 Identity = 175/473 (37.00%), Postives = 237/473 (50.11%), Query Frame = 1
Query: 367 VAQVATERLSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYP-----LPGAHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDR--PPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVT-GDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXG------------RRKVKVKGTNPTWPTLFRKKPEGWGGSGEGESE--------------------PETCP---VTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
+ ++A ++L +LL QEGRD EA A LK+ G YRL++ +L YP +P + + R++ S S V AVD+ALP ++ +Q F + S FW EHGYN ++ YFSY+HSL PP+++++QVI + A FPA EA++ EWWAH RPH SGHQ+HFDSDNEG G +RNPI+S V+Y+T G +GGPTLVT Q ++LA+RGW+VHP R+ MFDG VLHGVIPGRG P P+ AG R+T+MVAFWRDI+ R R LP S+ P +P G R +++ GT+ T P RK +G G G S PE CP V P+ V +W+D + +N+ +R L+ LP+Y LCFQGF
Sbjct: 347 LVKLAQKKLGMLLCQEGRDLEAVAPLKKLGCLYRLAAGVLHYPDAAHSIPDLSQQHPLPLSAAAASRQHFGSPALPDASXXXXXXXXXXXXXXXXXXXXXXXLVQAVDAALPPQVVDLMQAAFSTSSPFWLEHGYNQDSP---YFSYVHSLGGGGPPKSAMDQVINVIWRAASSCFPAASEAKYAEWWAHCRPHGSGHQMHFDSDNEGLGEVRNPIISTVLYLTSGGIGGPTLVTDQTFSGQQLAERGWMVHPNRGRLTMFDGSVLHGVIPGRG---PSPK-----------AG------EKRITFMVAFWRDIRVRARRDGLPG------SSQPYPYTCRSPYGGQQKGDMGESTVGSVKIELSHKSEDPRGQMEAPGTSSTTP--LRKFEDGPGPDCFGLSMKPVWKHTWQHAFCELLPSEFPEMCPHVSVDPIPVQPIWQDTEYQKNVSLRRSLRALEGLPKYGLCFQGF 788
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A8J4GX51_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GX51_9CHLO) HSP 1 Score: 248 bits (634), Expect = 3.130e-69 Identity = 171/448 (38.17%), Postives = 212/448 (47.32%), Query Frame = 1
Query: 391 LSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPLPGAHPSE------------------AVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPL-ASATPERT-------IPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKKPEGWGGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
L++LL QEGRD+EA L+ F +RL+ +L YPL S A+ET PT S+ + +FV AVD ALP +L L+ +RFW+EHGY G GYFSY+H L P +++ Q + L RFPA EARF EWWAH R H SGHQLHFDSD+EG GG+RNPIVS V+Y+TG +GGPTLVT Q LG LA GW+VH R NR+ MFD VLHGVIPGRG P P P E R+T M+AFWRDIQ+RPR LP P P A +P + +PP P G P+GWG + ++ P+A+ RVWE +DG + EYD CFQGF
Sbjct: 327 LAMLLCQEGRDQEAVPHLRALDFTHRLARQVLHYPLDPLLASRGDPAVVVAAAAVAGDVDGAMETAAPTT---------------------------SSSALAEYPRFVRAVDGALPPALLHVLRTALAPGARFWTEHGY----GRVGYFSYMHELGSPCLSAVHQAAVLLHRLIVTRFPAAAEARFAEWWAHCRRHPSGHQLHFDSDDEGVGGVRNPIVSGVIYLTGGIGGPTLVTPQLLGGP-LAPHGWLVHTRENRLGMFDSTVLHGVIPGRG-PSPRPGE-------------------YRITLMIAFWRDIQSRPRDDGLPGPSQPFPAPGSPAASRYSWMADLPPHPDG----------------------------------PDGWGTTNPRDA-------VPMAIDRVWERLDGGAAQPGAV---------EYDACFQGF 672
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Match: A0A8J4EYQ1_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EYQ1_9CHLO) HSP 1 Score: 246 bits (628), Expect = 2.710e-68 Identity = 178/481 (37.01%), Postives = 229/481 (47.61%), Query Frame = 1
Query: 283 DVEFHLKQALSATVSVPEEERGNEEEGGV---AQVATER-----------LSLLLYQEGRDEEAAAILKRRGFRYRLSSDILRYPL---------PGAHPSEAVETTKPTRKRKNASSGTPSPESTRREGKNRRKRRRSTGNENDVGKFVSAVDSALPLTMLRHLQEVFGSQSRFWSEHGYNSETGTPGYFSYIHSLDRPPETSIEQVIGRVKALAEQRFPAVKEARFVEWWAHRRPHSSGHQLHFDSDNEGRGGIRNPIVSAVVYVTGDVGGPTLVTTQRLGSKRLADRGWIVHPRINRVCMFDGGVLHGVIPGRGVPPPLPREDVINVEGRQVAGGSGSDDSARVTWMVAFWRDIQARPRTLPLPSPLTPLASATPERTIPPTPSGXXXXXXXXXXXXXGRRKVKVKGTNPTWPTLFRKKPEGWGGSGEGESEPETCPVTPVAVLRVWEDVDGTENMRDGLGVRRLKRLPEYDLCFQGF 1656
+ E LK AL+A ++ + +E G+ A A R L++LL QEGRD EA LK F +RL+ +L YPL P TP P + + ++ ++V AVD ALP ++L L+ +RFW+EHGY G GYFSY+H L P ++I Q + L R+PA EARF EWWAH R H SGHQLHFDSD+EG GG+RNPIVS V+Y+TG+VGGPTLVT+Q LG LA RGW+VHPR NR+ MFD VLHGVIPGRG P P P + R+T M+AFWRDIQ RPR LP P P + P +P+ + +W P+ G G G ++P P A+ RVWE +DG + +YD CFQGF
Sbjct: 282 EAEARLKTALAAAEALASGSGNDADEDGLLLDANAACRREWEAGAAARRSLAMLLCQEGRDVEAVPHLKALDFTHRLARQVLHYPLDPLLAAQEDPDGPTVAXXXXXXXXXXXXXXXXXTPVPTTL-------------SDADDQYPRYVRAVDDALPPSLLHVLRTALAPGARFWAEHGY----GRVGYFSYMHELGSPCLSAIHQATVLLHRLIVTRYPAAAEARFAEWWAHCRRHPSGHQLHFDSDDEGVGGVRNPIVSGVIYLTGEVGGPTLVTSQLLGGP-LAPRGWLVHPRENRLGMFDSTVLHGVIPGRG-PSPRPGD-------------------YRITLMIAFWRDIQCRPRDDGLPGPSQPFPA-------PGSPAA----------------------SRYSWMADMPAHPD--GPDGWGTTDPRDA--APTAIDRVWERLDGGAAQPGAV---------QYDACFQGF 682 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19296.5339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19296.5339.1 >prot_H-elongata_contig19296.5339.1 ID=prot_H-elongata_contig19296.5339.1|Name=mRNA_H-elongata_contig19296.5339.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=550bp MAQFEELLRSEASRFWVRRRARSLLHEALSEEQAGDLGSAEARCAASLTAback to top mRNA from alignment at H-elongata_contig19296:2..6134- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19296.5339.1 ID=mRNA_H-elongata_contig19296.5339.1|Name=mRNA_H-elongata_contig19296.5339.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6133bp|location=Sequence derived from alignment at H-elongata_contig19296:2..6134- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19296:2..6134- >mRNA_H-elongata_contig19296.5339.1 ID=mRNA_H-elongata_contig19296.5339.1|Name=mRNA_H-elongata_contig19296.5339.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3300bp|location=Sequence derived from alignment at H-elongata_contig19296:2..6134- (Himanthalia elongata Himel1 dioecious)back to top |