prot_H-elongata_contig19293.5338.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19293.5338.1
Unique Nameprot_H-elongata_contig19293.5338.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length283
Homology
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BLAST of mRNA_H-elongata_contig19293.5338.1 vs. uniprot
Match: D7FZS2_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS2_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 9.930e-39
Identity = 122/323 (37.77%), Postives = 152/323 (47.06%), Query Frame = 0 
Query:    9 VAEVLAKAQSQRKKKGEATFCRPLPPPTFPWRVEIFSQVRKDSARQRKLLSVTAARDIVYAHHVNVYKNITAETYARKMDASRWVTGGFDVYRQRVAALSMDAKRYRGYKEAS--------------ILPRDS-VIKESVMDSSYSDIDGSVDIILPARS---------------ANKG------------------QAEFNDSEQISAPTRSAEDSTTLSTAELSGSANNKTARKVMIDQGSSDAS--MDVVPFFNVRAKYIRTWSDTALSRPYHVPPFPSWRAGESTHK-DVMTRVGSLPPSF-----VGSQRTLEAYRKT 275
            VA VLAK  S  K+   AT       P  PW +EIF+QVR D+ARQRKL  V+ AR+ VYA + N+YK+  A TYAR ++ASR   GG + YR+RV   S DA+RYRGY E                +LP D      +   SS     GSV    P+RS               A +G                  +    D  +  AP  S  DS T          N  T R+     G       +DVVPF N+RAKY+R W+DT LSRPYHV P P+WRA  +     + + VGS   S       GS +TLEAYRKT
Sbjct:  152 VAAVLAKDYSVLKEGEGATKGASAALPPAPWHIEIFAQVRLDTARQRKLHGVSVAREGVYARYANIYKDHAARTYARTIEASRQERGGLEAYRRRVVKASTDAERYRGYVEMDTPRDDPHWEEDGLGLLPADGGSTSTNYAASSNGRESGSVAGFSPSRSSANVDVSLSSEKEDGAGRGLVHGDETARRWPVDRAAPECSMGDGGEPEAPAVSRLDSVT-------DDENTATTRRSFDHGGGGGRGCFVDVVPFNNIRAKYLRPWNDTELSRPYHVAPSPTWRADRAVGTPSLASSVGSSITSTDAFSAAGSGQTLEAYRKT 467
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BLAST of mRNA_H-elongata_contig19293.5338.1 vs. uniprot
Match: A0A6H5KP45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP45_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 5.430e-11
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:  190 NNKTARKVMIDQGSSDAS--MDVVPFFNVRAKYIRTWSDTALSRPYHVPPFPSWRAGESTHK-DVMTRVGSLPPSF-----VGSQRTLEAYRK 274
            N  T R+   D G       +DVVPF N+RAKY+R W+DT LSRPYHV P P+WRAG +     + + VGS   S        S + LEAYRK
Sbjct:  192 NTATTRRSFSDGGIGGRGCFVDVVPFNNIRAKYLRPWNDTELSRPYHVAPSPTWRAGRAVGAPSLASSVGSSITSTDALSAAESGQALEAYRK 284
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19293.5338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZS2_ECTSI9.930e-3937.77Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KP45_9PHAE5.430e-1146.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 269..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19293contigH-elongata_contig19293:4317..5395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19293.5338.1mRNA_H-elongata_contig19293.5338.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19293 4317..5395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19293.5338.1 ID=prot_H-elongata_contig19293.5338.1|Name=mRNA_H-elongata_contig19293.5338.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=283bp
AEFRGFTEVAEVLAKAQSQRKKKGEATFCRPLPPPTFPWRVEIFSQVRKD
SARQRKLLSVTAARDIVYAHHVNVYKNITAETYARKMDASRWVTGGFDVY
RQRVAALSMDAKRYRGYKEASILPRDSVIKESVMDSSYSDIDGSVDIILP
ARSANKGQAEFNDSEQISAPTRSAEDSTTLSTAELSGSANNKTARKVMID
QGSSDASMDVVPFFNVRAKYIRTWSDTALSRPYHVPPFPSWRAGESTHKD
VMTRVGSLPPSFVGSQRTLEAYRKTREQARQN*
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