prot_H-elongata_contig19257.5330.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19257.5330.1
Unique Nameprot_H-elongata_contig19257.5330.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length354
Homology
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A7S4DK52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DK52_HETAK)

HSP 1 Score: 181 bits (458), Expect = 3.320e-51
Identity = 100/196 (51.02%), Postives = 127/196 (64.80%), Query Frame = 0
Query:  111 SISAVMNAANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTTRHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILL-KDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAFISYYT 305
            +++  M +A+ VPPV YF YLMAAGVGVPVSED L I+VGTLL  A FT   K+  V + Y GVV+SD++ YS G  FR G+  PLRRI + K+    S+   +A           + +RR+G++ G AERFA+G+RGP+ L CG  GVP   F AGVALGAL GT+P+QL  GY LR RP   AAI A   +YYT
Sbjct:   91 NLAGAMQSADKVPPVAYFGYLMAAGVGVPVSEDALCIWVGTLLPKAQFTLSRKIKSVLYLYTGVVLSDMVTYSAGVAFRNGMLQPLRRIFMPKNTDGLSSTSPMARAE--------QTVRRAGRWAGTAERFALGLRGPVCLACGALGVPPGTFLAGVALGAL-GTLPLQLGAGYLLRSRPDAAAAIAAGAAAYYT 277          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A0G4F5D7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F5D7_VITBC)

HSP 1 Score: 170 bits (430), Expect = 7.430e-47
Identity = 97/214 (45.33%), Postives = 127/214 (59.35%), Query Frame = 0
Query:  111 SISAVMNAANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTTRHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGS---KNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAFISYYTFGPPLIATFGGATLWL 321
            SI  ++  A+ VP   YFLYLMAAG+G+PVSED L IFVGTLL   +  ++ +VA VA  YAGV +SD++ YSIG    RGL  P++  +    GD         G P  +   +  L R++ SG  VG  +R+ VGVR P+ L+CGFTGVP R FA+GV LG   GT+ +QLA+GYALR+ P     I A   +YY  G PL A      L+ 
Sbjct:   90 SIPELLERASTVPVPCYFLYLMAAGIGIPVSEDALCIFVGTLLPQPSSWSK-RVATVATLYAGVTVSDMLTYSIGVALERGLLEPIKHRIFPHHGD---------GWPPKNSLWERALRRVQSSGGAVGFVQRWMVGVRYPIALVCGFTGVPFRSFASGV-LGGAVGTLTVQLAIGYALRNNPKATGVIAAGIATYYMLGAPLAALASSVVLYF 292          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A8J9S1T7_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S1T7_9CHLO)

HSP 1 Score: 134 bits (338), Expect = 1.890e-33
Identity = 75/177 (42.37%), Postives = 107/177 (60.45%), Query Frame = 0
Query:  115 VMNAANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTTRHKVACVAWC-YAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRP 290
            ++N   N  P+YY +Y+ AAG+G+P SED  +I+VG+ L    +    + A V +  Y GVV+SD++ + IG   R+GL  PL+  LL      S  I  AE          E++ +  KY+G  +RF++G RGP+ LL GFTGVP   FAAG +LGAL GT+PIQL +GY +R+ P
Sbjct:   72 IVNFIENADPLYYLVYMFAAGLGLPCSEDAFVIWVGSKLWRGVYGAWQQAAYVLFIVYVGVVVSDMLTFCIGLALRQGLLKPLKDKLLPK---NSASITKAE----------EKVTKWSKYIGAVQRFSLGFRGPLCLLSGFTGVPAAQFAAGASLGAL-GTMPIQLTIGYLMRNAP 234          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A7R9TA43_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TA43_9VIRI)

HSP 1 Score: 127 bits (320), Expect = 4.850e-31
Identity = 75/172 (43.60%), Postives = 98/172 (56.98%), Query Frame = 0
Query:  123 PPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTT----RHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRP 290
            PP  YF Y + AG+G+P SED ++ FVG LL  A   T    +     +A  Y GVV+SD++ Y IG    RGL   +RR+LL + G ++T            +  L  +R  G  VG  +RF VG+RGP+ L  GFTG+PL  FA G A+GA   TVP+QLA GY LRD P
Sbjct:   57 PPAAYFAYFLGAGIGLPFSEDAMVAFVGALLSRAWLGTAPLAQPAAQLLAVVYVGVVLSDVLTYVIGAALGRGLAPGMRRLLLPE-GSQAT------------ERALATVRSFGVAVGAVQRFCVGLRGPVCLAAGFTGMPLSKFALGAAIGASI-TVPLQLAAGYLLRDSP 214          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A5J4YD61_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YD61_9CHLO)

HSP 1 Score: 118 bits (296), Expect = 5.090e-28
Identity = 80/233 (34.33%), Postives = 123/233 (52.79%), Query Frame = 0
Query:  108 GASSISAVMNAANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTTRHKVACV-AWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRP----ATVAAIGAAFISYYTFGPPLIATFGGATLWLSRRKRRPRDVRGGE 335
            GA+S++  +  A   PP  Y +Y++AAG G+P SED L+++VG+ +    +     +A V +  Y GVV+SD++ + +G   ++G F  L+  L  +       I+V              I +  + +G  +RF++G RGP+ L+CGFTGVP   FA G A+GAL GT+P+QL +GY LR  P      +A + A  +     GP  IAT   AT      K +P   + GE
Sbjct:    4 GAASLAVFLETA---PPPLYLVYMLAAGFGIPCSEDALVVWVGSNILKGVYGGWQGIAYVLSIVYFGVVVSDMVTFFMGVALQKGFFKSLKNSLFSNSNSFDRAINV--------------INKRSRTIGAIQRFSLGFRGPLCLVCGFTGVPPTRFALGAAVGAL-GTMPLQLTVGYYLRHTPNPYLTALAVVSAPNLCGQLLGP--IAT---ATGLYFAGKEQPNQQKPGE 213          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A8J5X791_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X791_DIALT)

HSP 1 Score: 117 bits (294), Expect = 6.130e-27
Identity = 80/210 (38.10%), Postives = 104/210 (49.52%), Query Frame = 0
Query:  119 ANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTTRHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSK---NILERIRRSGKYVGVAERFAVGVRGPMTLLCG-FTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAFISYYTFGPPLIATFGGATLWLSRR 324
            ++++ P  YF YLM AG+GVP+SED L +  G++LG+     R +   VA  Y GVV+SD+  + IG      +   LRR                   P G       +  +  SG YVG   RF VG+R P+ L CG   GVPL  FAAG ALGAL  TVP QLALG ALR+R  +   + +   S+Y  GP   A        L  R
Sbjct:   82 SSSIQPWQYFCYLMLAGLGVPLSEDGLGLLAGSVLGSLEPARRART--VAALYLGVVLSDVETFLIGALLVSRVGRALRRXXXXXXXXXXXXXXXXXXQPLGGAAGAKAMRLVADSGAYVGFVARFCVGLRAPIALTCGVLPGVPLGRFAAGAALGALV-TVPAQLALGAALRERVTSAVGLASLCASFYAAGPVSFAVASAVLYALGAR 288          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A7S2S6G0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S6G0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.580e-26
Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 0
Query:  121 NVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFTTRHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLG----DESTIIDVAEGMPAGSKN--ILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVP-LRGFAAGVALGALFGTVPIQLALGYALRDRPAT 292
            + PP+ YFL L+AAG GVP+SED + I VGT L NA    + +   +   Y G+V+SD I +SIG   RRG+  P+R+ +L +      D++   D  EG     K   +L +I R+G YVG   R +VG+RGPM L  GF+G      FA G  LGA F ++PIQL +GY +    +T
Sbjct:  131 STPPMAYFLALIAAGFGVPISEDAMCILVGTSL-NALQEKQTRNTVLLALYTGIVLSDFITFSIGRALRRGVLEPIRKRVLGNENITTTDDANNNDKTEGKQRRRKRDRVLAKISRAGDYVGFVTRLSVGMRGPMILFTGFSGTTTFAKFAVGTILGA-FVSLPIQLWIGYRMSCAAST 307          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A1Y1I6Y9_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I6Y9_KLENI)

HSP 1 Score: 108 bits (271), Expect = 6.170e-24
Identity = 87/274 (31.75%), Postives = 122/274 (44.53%), Query Frame = 0
Query:   73 LPWARGSPHIARTCAAGELSMSTSTSAISDIRRFFGASSISAVMNAANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNANFT--TRHKV------------ACVAWCYAGVVISDLIPYSIG-CGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAFISYYTFGPPLIATFGGATLWLSRRKRRPRDV 331
            L W R SP  A    AG+       +A       FGA  +   +   +  P + YF  LMAAG G+ VSE+ L ++VG  LG       TR  +            + + W Y GV +SDLIP+  G    +RG               ES    +     A    +   +R+ G Y+G+ ERF++GVR P   L GF+GV    F  GV  G LF T+P+Q+ LG+ LRDRP    A  AA +  +T  P   A    A  ++ +R  +  D 
Sbjct:   17 LVWRRPSPAFA-AAVAGDQGAGAGGAAFK-----FGAFGLRGSLT--DRTPGLAYFALLMAAGCGLFVSEEALNVWVGGSLGRCLVLDGTREALMQSLRANWGYIASVIFWVYWGVCLSDLIPFYAGKWAAQRG---------------ESVTEKLGGTNQATLARVTSAVRKYGAYIGLVERFSLGVRNPTAFLAGFSGVSTSTFFIGVCAGGLF-TLPLQMGLGFVLRDRPVAALATVAAVVGTWTVVPYASAALAAAWFFVKQRLDKKGDA 266          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: J3LAC8_ORYBR (Uncharacterized protein n=4 Tax=Oryza TaxID=4527 RepID=J3LAC8_ORYBR)

HSP 1 Score: 107 bits (268), Expect = 8.110e-23
Identity = 76/217 (35.02%), Postives = 111/217 (51.15%), Query Frame = 0
Query:  123 PPVYYFLYLMAAGVGVPVSEDVLLIFVGTLLGNA------------NFTTR--HKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAFISYYTFGPPLIATFGGATLWLSRRK 325
            P   YF  LMAAG G+ +SE+ L ++VG  L  +            +F+T   + ++ V W Y GV ISD++P+ +G  FR+           K   D S+ I + +     + +I   +++ G  +G  ERF+VGVR P   L G  G+P   + AGV  G LF T+PIQLA+G+ LR+RP    A  AA +  +T  P   A       +LSRRK
Sbjct:  157 PGWVYFWLLMAAGFGLFISEEALNVWVGISLARSLCLDGTWPSLVNSFSTNASYIISTVLWVYWGVCISDMVPFYLGKLFRQ----------TKASEDISSKIGIGKEK---ALSISRAVQKYGNLIGFVERFSVGVRNPTGFLAGALGIPADCYFAGVCCGCLF-TLPIQLAVGFFLRERPVVALASVAAAVGMWTVFPYAAAACTALFFYLSRRK 359          
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Match: A0A6G1FFI5_9ORYZ (Uncharacterized protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1FFI5_9ORYZ)

HSP 1 Score: 105 bits (261), Expect = 9.200e-23
Identity = 72/213 (33.80%), Postives = 108/213 (50.70%), Query Frame = 0
Query:  127 YFLYLMAAGVGVPVSEDVLLIFVG--------------TLLGNANFTTRHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRILLKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMTLLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAFISYYTFGPPLIATFGGATLWLSRRK 325
            YF  LMAAG G+ +SE+ L ++VG              +L+ + +    + ++ V W Y GV ISD++P+ +G  FR+           +   D S+ I + +     + +I   +++ G  +G  ERF+VGVR P   L G  G+P   + AGV  G LF T+PIQLA+G+ LR+RP    A  AA +  +T  P   A        LSRRK
Sbjct:   42 YFWLLMAAGFGLFISEEALNVWVGISLARSLCLDGTWRSLVNSFSMNASYIISTVLWVYWGVCISDMVPFYLGKLFRQ----------TRASEDISSKIGIGKEK---ALSISRAVQKYGNLIGFVERFSVGVRNPTGFLAGALGIPADCYFAGVCCGCLF-TLPIQLAVGFFLRERPVVALASVAAAVGMWTVFPYAAAACTALFFCLSRRK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19257.5330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DK52_HETAK3.320e-5151.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0G4F5D7_VITBC7.430e-4745.33Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A8J9S1T7_9CHLO1.890e-3342.37Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A7R9TA43_9VIRI4.850e-3143.60Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A5J4YD61_9CHLO5.090e-2834.33Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A8J5X791_DIALT6.130e-2738.10Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2S6G0_9STRA4.580e-2641.34Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1Y1I6Y9_KLENI6.170e-2431.75Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
J3LAC8_ORYBR8.110e-2335.02Uncharacterized protein n=4 Tax=Oryza TaxID=4527 R... [more]
A0A6G1FFI5_9ORYZ9.200e-2333.80Uncharacterized protein n=1 Tax=Oryza meyeriana va... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032818DedA familyPANTHERPTHR30353INNER MEMBRANE PROTEIN DEDA-RELATEDcoord: 106..323
NoneNo IPR availablePANTHERPTHR30353:SF0TRANSMEMBRANE PROTEINcoord: 106..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 287..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..322
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 323..353
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..29
score: 0.586
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 300..322
NoneNo IPR availableTMHMMTMhelixcoord: 263..285
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19257contigH-elongata_contig19257:4016..6584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19257.5330.1mRNA_H-elongata_contig19257.5330.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19257 3746..6704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19257.5330.1 ID=prot_H-elongata_contig19257.5330.1|Name=mRNA_H-elongata_contig19257.5330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=354bp
MSHRKNMNNYVGLLFICIFVLVTMIPCSCFQLPGSDAGGLLQVRGMLDTS
ACNRSSRRFGDCGRREQGVPRGLPWARGSPHIARTCAAGELSMSTSTSAI
SDIRRFFGASSISAVMNAANNVPPVYYFLYLMAAGVGVPVSEDVLLIFVG
TLLGNANFTTRHKVACVAWCYAGVVISDLIPYSIGCGFRRGLFNPLRRIL
LKDLGDESTIIDVAEGMPAGSKNILERIRRSGKYVGVAERFAVGVRGPMT
LLCGFTGVPLRGFAAGVALGALFGTVPIQLALGYALRDRPATVAAIGAAF
ISYYTFGPPLIATFGGATLWLSRRKRRPRDVRGGEGECQNAGDLELGTGR
AGI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032818DedA