prot_H-elongata_contig19203.5317.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19203.5317.1
Unique Nameprot_H-elongata_contig19203.5317.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length398
Homology
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: D7FK74_ECTSI (Similar to ubiquitin specific protease 34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK74_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 4.230e-109
Identity = 214/427 (50.12%), Postives = 268/427 (62.76%), Query Frame = 0
Query:    2 VAEALPLDDAERVLRTTNVHLRAYLKEVSLEDLKRSPENRAALSGAMDHVSALVSSLG-HVPKEDKLAVLSTRYSLCQQFLQGPTLQVRLAGLMELGKAIGHVQLALTREHEHMQHL-LALQQTVCVCVCREDK----------------------------GFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTLLLLKHLAASAVKLQMDRLADLGLSAMAEEEFLAPASTVAAAAAKGVVFREGGLGQEDVEDRDRRGSRNGLEVLWECVQDSPPEDERGVLSPDLHEEAFLYLSQVVGQLSGGLPCSVDPRVWLLDEVVTCLKERNSVVQALRALRALLDSFNQCDITV 398
            VAE +    A ++L  T  ++RAY+  VS +DLKRSPENRAAL  AMD +S L+  +   +P   K AV+ TRY LC ++L+GPTLQVRL+GLMELGKAI ++  +    ++  Q + +A Q+ +        K                            G  L+ WM++D+ +E LFSA FLHTETLKRSG++PR+LAWL KLSN+H++LIW+AAR+SAHESIRHAVLQLLQGLFP L    V   L L+N+ AR+LPK EFD RTL+LL+HLA + +KL+ +R+ +LG    AE E  AP  T    A              +     R G  +G+EVLW+CVQD  P D RG L   LHEEAF  L   VGQL  GLPCSVDPRVWLLDEVV CLKER SVVQALR LRALL+SF    I V
Sbjct:  658 VAEVVSDATALKILNATLTNVRAYVAGVSSDDLKRSPENRAALFSAMDVISFLIDRIPTKLPIGYKRAVMKTRYGLCLEYLKGPTLQVRLSGLMELGKAIHNMHASHAHHYQQRQLIQMAHQKEIEDRAAARKKALSSPDNNADSDHSRERMANEFDDKHWVGHDLADWMINDELIELLFSAGFLHTETLKRSGDIPRYLAWLNKLSNDHLKLIWDAARESAHESIRHAVLQLLQGLFPHL----VKEQLGLINSFARQLPKCEFDVRTLVLLRHLATATMKLEKERVTELGTKKTAELEVTAPTDT----AXXXXXXXXXXXXXXEESGCARSGVMSGMEVLWDCVQDDAPGDVRGALPLALHEEAFSCLLNSVGQLGSGLPCSVDPRVWLLDEVVKCLKERKSVVQALRVLRALLESFRHFAIMV 1076          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: A0A6H5KFW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW4_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 1.690e-100
Identity = 218/472 (46.19%), Postives = 267/472 (56.57%), Query Frame = 0
Query:    2 VAEALPLDDAERVLRTTNVHLRAYLKEVSLEDLKRSPENRAALSGAMDHVSALVSSLG-HVPKEDKLAVLSTRYSLCQQFLQGPTLQVRLAGLMELGKAI-----GHVQLALTREHEHMQHLLALQQTVCVCV--------------CRE-------DKGFI---LSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTLLLLKHLAASAVKLQMDRLADLGLSAMAEEEFLAPASTVAAAAAKGVVFREGGLGQEDVED-RDRRGSRNGLEVLWECVQDSPPEDER--------------------------------------------GVLSPDLHEEAFLYLSQVVGQLSGGLPCSVDPRVWLLDEVVTCLKERNSVVQALRALRALLDSFNQCDITV 398
            VAE +    A ++L  T  ++RAY+  VS +DLKRSPENRAAL  AMD +S L+  +   +P   K AV+ TRY LC ++L+GPTLQVRL+GLMELGKAI      H      R+   M H   ++                      RE       DK ++   L+ WM++D+ +E LFSA FLHTETLKRSG++PR+LAWL KLSN+H++LIW+AAR+SAHESIRHAVLQLLQGLFP L    V   L L+N+ AR+LPK EFD RTL+LL+HLA + +KL+ +R+ +LG    AE E  AP  T                     E  R R G  +G+EVLW+CVQD  P D R                                            G L   LHEEAF  L   VGQL  GLPCSVDPRVWLLDEVV CLKER SVVQALR LRALL+SF    I V
Sbjct:  602 VAEVVSDATALKILNETLTNVRAYVAGVSSDDLKRSPENRAALFSAMDFISFLIDRIPTKLPIGYKRAVMKTRYGLCLEYLKGPTLQVRLSGLMELGKAIHNMHSSHAHHYQQRQLFQMAHQKEIEDRAAARTKALSSPGNNADSDYSRERMASEFDDKHWVGHDLADWMINDELIELLFSAGFLHTETLKRSGDIPRYLAWLNKLSNDHLKLIWDAARESAHESIRHAVLQLLQGLFPHL----VKEQLGLINSFARQLPKCEFDVRTLVLLRHLATATMKLEKERVTELGTKKAAELEVTAPTDTAXXXXXXXXXXXXXXXXXXXXESSRARSGVMSGMEVLWDCVQDDAPGDARHVASWSGGDGYGRFGGGGRVSELIARRQECEGFVVSLMRRAVVRGALPLALHEEAFSCLLNSVGQLGSGLPCSVDPRVWLLDEVVKCLKERKSVVQALRVLRALLESFRHFAIMV 1069          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: A0A7S1BN11_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN11_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.860e-10
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  140 WMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPAL---EVIVVFSALCLVNTLARRLPKREFDGRTLLLLKHLAASAVKL 254
            W+L    +E L S E+LH E LKR   +P F+     L++ H+  IW AA  S+HESI+HAV  LL  +   L   ++ V++  L       R LP  E D ++LLL+   A +A+ L
Sbjct:  466 WILDSQLLELLMSPEYLHPELLKRCARIPLFMVDQDALADSHLSAIWRAAVTSSHESIKHAVFNLLLEILDKLGNSQIRVLYQKL-------RNLPATEHDSQSLLLVNKFADAAMGL 576          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: A0A7S1BNC6_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNC6_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 9.790e-10
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  140 WMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPAL---EVIVVFSALCLVNTLARRLPKREFDGRTLLLLKHLAASAVKL 254
            W+L    +E L S E+LH E LKR   +P F+     L++ H+  IW AA  S+HESI+HAV  LL  +   L   ++ V++  L       R LP  E D ++LLL+   A +A+ L
Sbjct: 1110 WILDSQLLELLMSPEYLHPELLKRCARIPLFMVDQDALADSHLSAIWRAAVTSSHESIKHAVFNLLLEILDKLGNSQIRVLYQKL-------RNLPATEHDSQSLLLVNKFADAAMGL 1220          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: J9K4J1_ACYPI (USP domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9K4J1_ACYPI)

HSP 1 Score: 63.9 bits (154), Expect = 3.440e-7
Identity = 65/234 (27.78%), Postives = 98/234 (41.88%), Query Frame = 0
Query:   18 TNVHLRAYLKEVSLEDLKRSPENRAALSGAMDHVSALVSSL--GHVPKEDKLAVLSTRYSLCQQFLQGPTLQVRLAGLMELGKAIG------HVQLALTREHEHMQHLLALQQTVCVCVCREDKGFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTLLL 243
            TNVH+   L+   L  +    +       A      + SS   GH    DK  +      L  ++   PTL +RLAG+ ++   IG      HV  A          ++ ++Q           G  L+TW++H   +  +F    LH E +K+      FLA  GK++NEH++ IW AA Q  H S +  V  LL G    LE   V      +  L R+L  +E   ++L L
Sbjct:  226 TNVHVFVPLRSKVLRFMCNLSDKELRTPAAKTMADFMWSSNKDGHTSNLDKDGL-----ELAFKYFTSPTLTMRLAGISQINSHIGSLNELVHVTAATLSTSSQSNDMVTIEQI----------GHNLATWLVHRKIISHVFGPN-LHVEVIKQCSITLNFLASEGKITNEHIDTIWQAA-QLKHCSKQ--VFDLLPGFIKHLEPAPVLH----LYHLLRKLEPKEHTEQSLFL 436          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: A0A6G0ZGD8_APHCR (Ubiquitinyl hydrolase 1 n=20 Tax=Aphididae TaxID=27482 RepID=A0A6G0ZGD8_APHCR)

HSP 1 Score: 63.9 bits (154), Expect = 3.630e-7
Identity = 65/234 (27.78%), Postives = 98/234 (41.88%), Query Frame = 0
Query:   18 TNVHLRAYLKEVSLEDLKRSPENRAALSGAMDHVSALVSSL--GHVPKEDKLAVLSTRYSLCQQFLQGPTLQVRLAGLMELGKAIG------HVQLALTREHEHMQHLLALQQTVCVCVCREDKGFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTLLL 243
            TNVH+   L+   L  +    +       A      + SS   GH    DK  +      L  ++   PTL +RLAG+ ++   IG      HV  A          ++ ++Q           G  L+TW++H   +  +F    LH E +K+      FLA  GK++NEH++ IW AA Q  H S +  V  LL G    LE   V      +  L R+L  +E   ++L L
Sbjct:  226 TNVHVFVPLRSKVLRFMCNLSDKELRTPAAKTMADFMWSSNKDGHTSNLDKDGL-----ELAFKYFTSPTLTMRLAGISQINSHIGSLNELVHVTAATLSTSSQSNDMVTIEQI----------GHNLATWLVHRKIISHVFGPN-LHVEVIKQCSITLNFLASEGKITNEHIDTIWQAA-QLKHCSKQ--VFDLLPGFIKHLEPAPVLH----LYHLLRKLEPKEHTEQSLFL 436          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: A0A2S2QEN9_9HEMI (Ubiquitin carboxyl-terminal hydrolase 34 (Fragment) n=1 Tax=Sipha flava TaxID=143950 RepID=A0A2S2QEN9_9HEMI)

HSP 1 Score: 61.6 bits (148), Expect = 1.790e-6
Identity = 52/174 (29.89%), Postives = 79/174 (45.40%), Query Frame = 0
Query:   76 LCQQFLQGPTLQVRLAGLMELGKAIG------HVQLALTREHEHMQHLLALQQTVCVCVCREDKGFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTLLL 243
            L  ++   PTL +RLAG+ ++   IG      HV  A          ++ ++Q           G  L+TW++H   +  +F    LH E +K+      FLA  GK++NEH++ IW AA Q  H S +  V  LL G    LE   V      +  L R+L  +E   ++L L
Sbjct:  279 LAFKYFTSPTLTMRLAGISQINSHIGSLNELVHVTAATLSTSSQSNDMVTIEQI----------GHNLATWLVHRKIISHVFGPN-LHVEVIKQCSITLNFLASEGKITNEHIDTIWQAA-QLKHCSKQ--VFDLLPGFIKHLEPAPVLH----LYHLLRKLEPKEHTEQSLFL 434          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: UPI0008F9BE5E (ubiquitin carboxyl-terminal hydrolase 34 isoform X1 n=2 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9BE5E)

HSP 1 Score: 59.7 bits (143), Expect = 7.970e-6
Identity = 44/165 (26.67%), Postives = 80/165 (48.48%), Query Frame = 0
Query:   76 LCQQFLQGPTLQVRLAGLMELGKAIGHVQLALTREHEHMQHLLALQQTVCVC---VCREDKGFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFD 237
            L  ++    TL +RLAG+ ++     H+ +     +  + +  + +Q+ C         D G  L+ W++ +D +  +F    LH E +K+S  +  FLA   KL+N+H+++IW AA+      ++H   Q+L  L P +  + V   L L N L +  PK   +
Sbjct:  304 LAFKYFTSSTLTMRLAGIAQINT---HINM-----YTELMNSSSCRQSTCGNNNNSSYNDIGHSLAVWLIENDIVSHIFGPN-LHVEVIKQSHIILNFLAMECKLTNDHIDIIWQAAQ------LKHCSKQVLDLLPPLINNMEVTPVLHLYNLLCQLSPKNHTE 453          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: UPI000E6E39B0 (ubiquitin carboxyl-terminal hydrolase puf n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E39B0)

HSP 1 Score: 57.4 bits (137), Expect = 4.240e-5
Identity = 53/198 (26.77%), Postives = 89/198 (44.95%), Query Frame = 0
Query:   25 YLKEVSLEDLKRSPENRAALSGAMDHVSALVSSLGHVPKEDKLAVLSTRYSLCQQFLQGPTLQVRLAGLMELGKAIGHVQLALTREHEHMQHLLALQQTVCVCVCREDKGFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALC 222
            Y+  +S +DL RSP  R         ++  + S    P + +LA       L  ++    TL +RL G+ ++              H +M + +   +TV      E+ G  LS W+  ++ +E +F    LH E +K+S  +  FLA  GK+S +H++LIW AA+        H +L  L     A   + ++S LC
Sbjct:  231 YMCRLSDQDL-RSPTTRT--------MAEFMWSAVKDPLDARLAFDREGLELAFKYFTSSTLTMRLGGVAQINA------------HINMFNEICATETVAEA---ENVGRRLSDWLTENNIIECIFGPN-LHAEVVKQSHIILNFLAVEGKISEQHMDLIWQAAQSKHCSKPVHDLLPSLVKNLAAAPALHLYSLLC 403          
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Match: A0A553P239_TIGCA (USP domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P239_TIGCA)

HSP 1 Score: 57.0 bits (136), Expect = 5.620e-5
Identity = 44/166 (26.51%), Postives = 80/166 (48.19%), Query Frame = 0
Query:   76 LCQQFLQGPTLQVRLAGLMELGKAIGHVQLALTREHEHMQHLLALQQTVCVCVCREDKGFILSTWMLHDDTMERLFSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHAVLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTL 241
            L  ++   PTL +RL G+ ++   I      +  +  + + ++ +          E+ G  LS W+L +  +E +F    LH E +K+S  +  FLA  GK++NEH+ +IW AA+      ++H   Q+   L P ++ +     L L   L + LP +E   +T+
Sbjct:  344 LAMKYFNSPTLTMRLTGITQINSHI-----TVFNDMSNSESVVEV----------ENVGLQLSNWILVNKIVEHIFGPN-LHVEVIKQSHILLNFLAVEGKITNEHINVIWQAAQ------LKHCSKQVHDLLLPLIKNLEAGPVLHLYE-LMKDLPVKEHTEQTI 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19203.5317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FK74_ECTSI4.230e-10950.12Similar to ubiquitin specific protease 34 n=1 Tax=... [more]
A0A6H5KFW4_9PHAE1.690e-10046.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1BN11_9STRA8.860e-1037.29Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BNC6_9STRA9.790e-1037.29Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
J9K4J1_ACYPI3.440e-727.78USP domain-containing protein n=2 Tax=Acyrthosipho... [more]
A0A6G0ZGD8_APHCR3.630e-727.78Ubiquitinyl hydrolase 1 n=20 Tax=Aphididae TaxID=2... [more]
A0A2S2QEN9_9HEMI1.790e-629.89Ubiquitin carboxyl-terminal hydrolase 34 (Fragment... [more]
UPI0008F9BE5E7.970e-626.67ubiquitin carboxyl-terminal hydrolase 34 isoform X... [more]
UPI000E6E39B04.240e-526.77ubiquitin carboxyl-terminal hydrolase puf n=1 Tax=... [more]
A0A553P239_TIGCA5.620e-526.51USP domain-containing protein n=1 Tax=Tigriopus ca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..398
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..224
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19203contigH-elongata_contig19203:2647..6790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19203.5317.1mRNA_H-elongata_contig19203.5317.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19203 2647..6790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19203.5317.1 ID=prot_H-elongata_contig19203.5317.1|Name=mRNA_H-elongata_contig19203.5317.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=398bp
QVAEALPLDDAERVLRTTNVHLRAYLKEVSLEDLKRSPENRAALSGAMDH
VSALVSSLGHVPKEDKLAVLSTRYSLCQQFLQGPTLQVRLAGLMELGKAI
GHVQLALTREHEHMQHLLALQQTVCVCVCREDKGFILSTWMLHDDTMERL
FSAEFLHTETLKRSGEVPRFLAWLGKLSNEHVELIWNAARQSAHESIRHA
VLQLLQGLFPALEVIVVFSALCLVNTLARRLPKREFDGRTLLLLKHLAAS
AVKLQMDRLADLGLSAMAEEEFLAPASTVAAAAAKGVVFREGGLGQEDVE
DRDRRGSRNGLEVLWECVQDSPPEDERGVLSPDLHEEAFLYLSQVVGQLS
GGLPCSVDPRVWLLDEVVTCLKERNSVVQALRALRALLDSFNQCDITV
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