mRNA_H-elongata_contig19198.5314.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: D8LPN0_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN0_ECTSI) HSP 1 Score: 224 bits (571), Expect = 4.690e-71 Identity = 112/142 (78.87%), Postives = 128/142 (90.14%), Query Frame = 1
Query: 1 EYSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTGEGQADSALR 426
+ SNGF+ N+YR+MA+SLV+MGAADGEV+ DAFAFDIE+V+D L SMEAQVDT+AVIDE TG VSYGTSVN DQE +TRLLLDI+GVAENNGLKL REFG+LIKQALYFDRYTRLLAP+LDPLRDDRVTLP G+AD+ LR
Sbjct: 162 DLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR 303
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A6H5KTF5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF5_9PHAE) HSP 1 Score: 223 bits (567), Expect = 4.300e-67 Identity = 111/142 (78.17%), Postives = 127/142 (89.44%), Query Frame = 1
Query: 1 EYSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTGEGQADSALR 426
+ SNGF+ N+YR+MA+SLV+MGAADGEV+ DAFAFDIE+V+D L SMEAQVDT+ VIDE TG VSYGTSVN DQE +TRLLLDI+GVAENNGLKL REFG+LIKQALYFDRYTRLLAP+LDPLRDDRVTLP G+AD+ LR
Sbjct: 474 DLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSTVIDEDTGNVSYGTSVNFDQESITRLLLDIVGVAENNGLKLPREFGMLIKQALYFDRYTRLLAPELDPLRDDRVTLPNEYGRADAGLR 615
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A835YPW4_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW4_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.040e-39 Identity = 77/134 (57.46%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 1 EYSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTGE 402
+ S G +A DYR MA +LV+MGA DG V+IDAFA DIE + RL M+ V + D TGRV S+N QE VT+LL+DI AENNGL+L REFGLLIKQALYFD Y++LLAP +D LRDDR+ LP +
Sbjct: 390 DLSAGVVAGDYRAMALALVQMGATDGVVDIDAFALDIEGIFLRLARMDRDVQVAPMADPVTGRVGVAASLNFQQEDVTKLLIDIAATAENNGLRLPREFGLLIKQALYFDAYSQLLAPTVDLLRDDRIILPDSD 523
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A7S3GYA9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYA9_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.990e-31 Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 10 NGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTL 390
+ F+ ND MA +L+ MGA D EVN + A D+ ++ RL S+E ++ D+ G VS V+ D+ VT LLLDI+ AE+NGLKL REF LL+KQALYFDRY RLLAP+LDPLRD RV L
Sbjct: 16 SSFVTNDSLGMAQALIAMGATDKEVNEERLAADVSSILARLTSLEPELRLRR--DDTGGAVS--AQVDFDEVQVTELLLDIVRAAEDNGLKLPREFALLVKQALYFDRYNRLLAPNLDPLRDSRVDL 138
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A4D9CYJ6_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYJ6_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.100e-31 Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 1 EYSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLP 393
E GF+ DY+ +A L+ MGA V+ + A D+E + +R+ +++ QV A ++ QT SV VD++ VTRLLL+I+ VA +NGLKL R+FGLLIKQ+LYFDRYTR+LAP LDPLRD RV P
Sbjct: 371 EVGEGFVGQDYQQIAQGLIRMGATAAAVDEEKLAADLEALFERVRTLDPQVVVVADMEAQTA----AASVAVDEDQVTRLLLEIVDVASSNGLKLPRQFGLLIKQSLYFDRYTRILAPTLDPLRDTRVNFP 497
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A7S2RT86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT86_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.790e-30 Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 13 GFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRV 384
G D+ +A LV MGA D EV+I AFA D+ RVV+ + + QV V D G V+ G + VD++ VTR+ LDI+GV+E NG+KL REFG+L+KQ LYFDRYTRLLAPDLD L DDRV
Sbjct: 452 GAAGEDWVQVAQGLVAMGATDQEVDIQAFAEDLRRVVEAINEINPQV---VVQDNMDGTVAAG--IGVDEQQVTRIALDIVGVSERNGVKLPREFGILVKQVLYFDRYTRLLAPDLDVLADDRV 570
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A813CAD1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CAD1_9DINO) HSP 1 Score: 119 bits (299), Expect = 1.270e-29 Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 4 YSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTGEGQADSAL 423
++ F AND MA +L+ MGA D V+ A A D++ V+ R+ ++ +V D GRV V +D + VT LLL++I VA++NGLKL REF LL+KQALYFDRYT+LLAPDLDPLRD RV L GE S L
Sbjct: 242 FALSFAANDAAGMAKNLIAMGATDRFVDESALASDVQNVLSRIAGLQPEVVLRGKGD---GRVV--AEVGLDNDQVTELLLELIRVADSNGLKLPREFALLVKQALYFDRYTKLLAPDLDPLRDSRVALGKGEAIEKSHL 376
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A812XC71_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XC71_9DINO) HSP 1 Score: 120 bits (302), Expect = 3.200e-29 Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 16 FLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTG 399
F ND + MA +L+ MGA D VN A A D+++V+ R+ ++ +V D GRV V +D + VT LLL++I A+NNGLKL REF LL+KQALYFDRYT+LLAPDLDPLRD RV L G
Sbjct: 432 FAGNDAKGMAKNLIAMGATDSFVNESALASDVQKVLSRIAGLQPEVVLRGKGD---GRVV--AEVGLDNDQVTELLLEVIRAADNNGLKLPREFALLVKQALYFDRYTKLLAPDLDPLRDSRVALGKG 554
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A7S0F6D6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6D6_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.250e-29 Identity = 62/140 (44.29%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 1 EYSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTGEGQADSA 420
E S DY MA +L MGA D EV+++ F DIE ++ R+ S++ + + D + S+N D+ VT LLL+++ V E+NGLKL REFGLL+KQ+LYFDRY ++LAP+LD + DDRV+ G+G A A
Sbjct: 78 ELSIALTLADYPGMARALCNMGATDAEVDVEKFGKDIETLMTRMNSVQPDIAVAVMADG-----TVAGSINFDENEVTNLLLEMVEVTEDNGLKLPREFGLLVKQSLYFDRYLKILAPELDVMNDDRVSGIGGDGAASEA 212
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Match: A0A812ISQ2_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812ISQ2_SYMMI) HSP 1 Score: 119 bits (299), Expect = 1.380e-28 Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 4 YSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQVDTTAVIDEQTGRVSYGTSVNVDQEVVTRLLLDIIGVAENNGLKLLREFGLLIKQALYFDRYTRLLAPDLDPLRDDRVTLPTGEGQADSAL 423
++ F AND MA +L+ MGA D V+ A A D++ V+ R+ ++ +V D GRV V +D + VT LLL++I VA++NGLKL REF LL+KQALYFDRYT+LLAPDLDPLRD RV L GE S L
Sbjct: 1157 FALSFAANDAAGMAKNLIAMGATDRFVDESALASDVQNVLSRIAGLQPEVVLRGKGD---GRVV--AEVGLDNDQVTELLLELIRVADSNGLKLPREFALLVKQALYFDRYTKLLAPDLDPLRDSRVALGKGEAIEKSHL 1291 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19198.5314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19198.5314.1 >prot_H-elongata_contig19198.5314.1 ID=prot_H-elongata_contig19198.5314.1|Name=mRNA_H-elongata_contig19198.5314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp EYSNGFLANDYRMMASSLVEMGAADGEVNIDAFAFDIERVVDRLVSMEAQback to top mRNA from alignment at H-elongata_contig19198:190..1432+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19198.5314.1 ID=mRNA_H-elongata_contig19198.5314.1|Name=mRNA_H-elongata_contig19198.5314.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1243bp|location=Sequence derived from alignment at H-elongata_contig19198:190..1432+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19198:190..1432+ >mRNA_H-elongata_contig19198.5314.1 ID=mRNA_H-elongata_contig19198.5314.1|Name=mRNA_H-elongata_contig19198.5314.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at H-elongata_contig19198:190..1432+ (Himanthalia elongata Himel1 dioecious)back to top |