mRNA_H-elongata_contig19193.5312.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19193.5312.1
Unique NamemRNA_H-elongata_contig19193.5312.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: D8LNF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF9_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 6.680e-153
Identity = 299/624 (47.92%), Postives = 346/624 (55.45%), Query Frame = 1 
Query:    1 PSSSTWCLQHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSNTFGGPADSEG----------------------------TTAGGGXXXXXVGGTANPERGRVTSSSGPVSATISRD-----------------------------------VLARGLVDGRRALDATGDEDDATDEDKRPKDE--------------KEGNPATEIAAQESSVLGLWRHGREGQEIGMRP--RALSDSYTPLPSNGRLRMTDGVRVHWEPERLPSGEKHRTRRVVQMGLKGAWLHALGSGKEVVKIERLDGLVAEQRRALTSWKPQSLMVPVARPLNVGHMESAQLEELLLVSKRARPKLRILCLHGYLQNSQLFRQRTRQLCRKLRPTAELVYVDAPHLLSPEELSPL--PLLSSPREEAAAAAVXXXXXXXXXXXXXGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RTWWRCDPEERKRAKAVKGMTGRCEWKGLEESLEFLRRVWDEQGPFDGMLGFSQGAAMASIFYHCSFSRTAKTQYPGGIG 1602
            P    +C QH +DTV+LFR CC+HLGPHAT T  FRGSPCYEKDRTRMMWFD+SFLV+MRKS WGT  GREV+LAIWV+RSF+EDC   AVCSNTFG P+   G                            T+  GG        +  P      + S P S    +                                         L+   +A  A G+E+D  D+D  P+                  G+P  E  ++  S  G +  G   +  G  P  RA S S      +GR  MTDGVR+HWEPERLPSGEKHRTRRVVQ+GLKG WL  LGSG  VV++ERLD L+ EQR ALTS +P  L VPVARPL++GH++  QL  L LVS+RARPKLRILCLHGYLQNSQ+F QRTRQLC+KL+ TAELVYVDAPHLLSPEEL P   P  SSP + AA+   XXXXXXXX     GEGG                                                          RTWWRCDPEERKRAKAV GM GRCEWKGLE+SL FLR+VWDE+GPFDG+LGFSQGAAMASIF HC+FS        GG G
Sbjct:   28 PYRQVFC-QHDKDTVVLFRACCEHLGPHATATQCFRGSPCYEKDRTRMMWFDSSFLVSMRKSEWGTKKGREVVLAIWVKRSFIEDCFGMAVCSNTFG-PSCGGGXXXXXXXXXRKGSGGIGRRSSFAVTPFPTSDSGGDDGRSPPTSGFPTPVNSVAGSPPASPVSGQQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLSKGQASLAQGNENDE-DDDNIPRGRAVTGDPSTRYYFGGSAGDPLGERRSEGGSGGGGFDEGAGLEGGGRAPERRARSQSLASPSYSGR--MTDGVRLHWEPERLPSGEKHRTRRVVQLGLKGKWLERLGSGDAVVRVERLDDLLIEQRTALTSSEPHLLRVPVARPLDMGHLQDTQLAALHLVSERARPKLRILCLHGYLQNSQIFSQRTRQLCKKLKNTAELVYVDAPHLLSPEELPPPLPPNPSSPLQAAASKFXXXXXXXXXKVVNTGEGGALGVGKEQLTPASSPTFSPPASPACGSKTESDSGGGGGSEGNAGTPGQQQQHLDRVGARTWWRCDPEERKRAKAVPGMAGRCEWKGLEDSLAFLRQVWDERGPFDGLLGFSQGAAMASIFNHCAFSGRESCSNGGGSG 646
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BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: A0A6H5JNT4_9PHAE (FSH1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT4_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 2.720e-127
Identity = 266/578 (46.02%), Postives = 305/578 (52.77%), Query Frame = 1 
Query:    1 PSSSTWCLQHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSNTFGG--------------------------------------PADSEGTTAGGGXXXXXVGGTANPERGRVTSSSGPVSATISRDVL--------------------------------ARGLVDGRRALDATGDEDDATDEDKRPKDEK--------------EGNPATEIAAQESSVLGLWRHGREGQEIGMRP--RALSDSYTPLPSNGRLRMTDGVRVHWEPERLPSGEKHRTRRVVQMGLKGAWLHALGSGKEVVKIERLDGLVAEQRRALTSWKPQSLMVPVARPLNVGHMESAQLEELLLVSKRARPKLRILCLHGYLQNSQLFRQRTRQLCRKLRPTAELVYVDAPHLLSPEELSPL--PLLSSPREEAAAAAVXXXXXXXXXXXXXGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RTWWRCDPEERKRAKAVKGMTGRCEWK 1443
            P    +C QH +DTV+LFR CC+HLGPHAT T  FRGSPCYEKDRTRMMWFDTSFLV+MRKS WGT  GREV+LA+WV+RSF+EDC  TAVCSNTFG                                       P    G   G           AN   G   +S  PVS    +                                   A  L+   +A  A G+E+D  D D  P+                  G+P  E  ++  S  G +  G   +  G  P  RA S S T    +GR  MTDGVR+HWEPERLPSGEKHRTRRVVQ+GLKG WL  LGSG  VV++ERLD L+ EQR ALTS +P  L VPVARPL++GH++ AQL  L LVS+RARPKLRILCLHGYLQNSQ+F +RTRQLC+KL+ TAELVYVDAPHLLSPEEL P   P  SSP + AA+   XXXXXXXX     GEGG                                                          RTWWRCDPEERKRAKAV GM GRCEWK
Sbjct:   28 PYRQVFC-QHDKDTVVLFRACCEHLGPHATATQCFRGSPCYEKDRTRMMWFDTSFLVSMRKSEWGTKKGREVVLAVWVKRSFVEDCFGTAVCSNTFGPSCGGSXXXXXXXXXXXXXXXXXXXXGIGRRSSFAVTPFPTSDRGFDDGRSPPTSGFPTPANSVAGSPPAS--PVSGQQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATALLAKGQASLAQGNENDEDDGDNIPRGRAVTGDPSTGYYFGGIAGDPLEERMSEGESGGGGFDEGAREERGGRAPERRARSQSLTSPSYSGR--MTDGVRLHWEPERLPSGEKHRTRRVVQLGLKGKWLERLGSGDAVVRVERLDDLLIEQRTALTSSEPHLLRVPVARPLDMGHLQEAQLAALHLVSERARPKLRILCLHGYLQNSQIFSRRTRQLCKKLKNTAELVYVDAPHLLSPEELPPPLPPNPSSPLQAAASKFXXXXXXXXXKVVNTGEGGALGVGKEQLTPASSPTFSPPASPACGSKTESDSGGGGGSEGNAGTPGQQQQHLDRVGARTWWRCDPEERKRAKAVPGMAGRCEWK 600
[Close]
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: A0A0L0HTK0_SPIPD (FSH1 domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HTK0_SPIPD)

HSP 1 Score: 74.3 bits (181), Expect = 2.560e-11
Identity = 57/197 (28.93%), Postives = 81/197 (41.12%), Query Frame = 1 
Query:  955 RARPKLRILCLHGYLQNSQLFRQRTRQLCRKLRPTAELVYVDAPHLLSPEELSPLPLLSSPREEAAAAAVXXXXXXXXXXXXXGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWWRCDPEERKRAKAVKGMTGRCEWKGLEESLEFLRRVWDEQGPFDGMLGFSQGAAMASI 1545
            R   +LRILCLHGY QN+++F +R   L + L+  AE V++ APH++ PE        +SP+ +A                  G+G                                                  R WWR D E +              ++G EESLEF++ +W  QGPF G+LGFSQGA MA++
Sbjct:   13 RLPTRLRILCLHGYTQNAEIFGKRIAVLAKDLKNLAEFVFISAPHVI-PE--------NSPQTDAERVTYPE-----------GDG-------------------------------------------------QRRWWRVDDESQA-------------YEGAEESLEFVKGIWKSQGPFHGILGFSQGATMAAL 127
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BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: F0ZPI1_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPI1_DICPU)

HSP 1 Score: 73.9 bits (180), Expect = 7.420e-11
Identity = 56/200 (28.00%), Postives = 81/200 (40.50%), Query Frame = 1 
Query:  967 KLRILCLHGYLQNSQLFRQRTRQLCRKLRPTAELVYVDAPHLLSPEELSPLPLLSSPREEAAAAAVXXXXXXXXXXXXXGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWWRCDPEERKRAKAVKGMTGRCEWKGLEESLEFLRRVWDEQGPFDGMLGFSQGAAMASIFYHCSFS 1566
            KL+ILCLHG+ QNS LF+ +T  L + ++  AELVYVDAPH++               +E   +A                                                                    +WWR   + +             E++G E++LE+LR V+++QGPFDG+LGFSQGA +AS+   CS S
Sbjct:    8 KLKILCLHGFKQNSSLFKSKTAVLRKSIKDIAELVYVDAPHIV---------------DETKGSA--------------------------------------------------------------------SWWRASKDGK-------------EYRGWEQTLEYLRSVFEKQGPFDGVLGFSQGAVLASLL--CSLS 109
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BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: A0A355CDC2_9CYAN (DUF4291 domain-containing protein n=2 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A355CDC2_9CYAN)

HSP 1 Score: 69.3 bits (168), Expect = 9.170e-10
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   25 QHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSN 282
            Q  ++TV++++     +G  A E G F G    E    RM W   +FL  M +S WGT PG+EVILA+W+RRS  ++ LA+AV SN
Sbjct:   25 QFDENTVVVYQAYRPVIGHFAAEHGYFGG----EFSLNRMSWIKPNFLWMMYRSEWGTKPGQEVILAVWLRRSAFDEILASAVHSN 106
[Close]
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: K9VCI4_9CYAN (Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 TaxID=179408 RepID=K9VCI4_9CYAN)

HSP 1 Score: 68.9 bits (167), Expect = 1.140e-9
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   25 QHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSN 282
            Q  + TV++++     +G  A E G F G    E    RM W   +FL  M +SAWGT PG+EVILA+W++RS  ++ LA+AV SN
Sbjct:   26 QFDEHTVVVYQAYRPAIGIFAAEQGYFGG----EFSLNRMSWIKPNFLWMMYRSAWGTKPGQEVILAVWLKRSAWDEILASAVHSN 107
[Close]
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: H3AM14_LATCH (Esterase OVCA2 n=5 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AM14_LATCH)

HSP 1 Score: 68.9 bits (167), Expect = 2.470e-9
Identity = 63/210 (30.00%), Postives = 88/210 (41.90%), Query Frame = 1 
Query:  916 ESAQLEELLLVSKRARPKLRILCLHGYLQNSQLFRQRTRQLCRKLRPTAELVYVDAPHLLSPEELSPLPLLSSPREEAAAAAVXXXXXXXXXXXXXGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWWRCDPEERKRAKAVKGMTGRCEWKGLEESLEFLRRVWDEQGPFDGMLGFSQGAAMASI 1545
            E+ +L+E +   K A   LR+LC+HGY QN   FR+RT  L + L+  AELVY+ AP  ++P      P  + P +     AV             G                                                      WW  DPE R+   A++  T  C  KGLEESLE + +   +QGPF+G+LGFSQG+A+ +I
Sbjct:   19 ETPKLKEEISSRKMAPGLLRLLCIHGYRQNETTFRERTGSLRKILKKHAELVYITAPLQVTP------PPGALPGDTDPGGAVHVGDPNGQMADPRG------------------------------------------------------WWFSDPE-RESFNALE-QTKSC--KGLEESLETVAKALADQGPFNGILGFSQGSALVAI 164
[Close]
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: A0A817HGS6_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817HGS6_9BILA)

HSP 1 Score: 66.2 bits (160), Expect = 2.550e-9
Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 1 
Query:   16 WCLQHGQD-TVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSNTFGGPADSE 309
            W L    D ++++++    ++   A E   F G P Y + R  M W  T+FL  M +S W     +E ILAIW+RRS  + CLA AV S+  G P D E
Sbjct:   32 WILASFDDESIIVYQAYNSNIAKFACENNHFTGCPGYNQQR--MTWIKTNFLWMMYRSQWAASSSQEHILAIWLRRSAFDSCLAQAVHSSHKGRPQDDE 128
[Close]
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: A0A7X6CNM8_9CYAN (DUF4291 domain-containing protein n=1 Tax=Microcoleus sp. SU_5_6 TaxID=2720483 RepID=A0A7X6CNM8_9CYAN)

HSP 1 Score: 67.8 bits (164), Expect = 3.080e-9
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:   25 QHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSN 282
            Q  ++TV++++     +G  A E G F G    E    RM W   +FL  M +S+WGT PG+EVILA+W++R   ++ LA+AV SN
Sbjct:   25 QFDENTVVVYQAYRPAIGHFAAENGYFGG----EFSLNRMSWIKPNFLWMMYRSSWGTKPGQEVILAVWLKRFAFDEILASAVHSN 106
[Close]
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Match: UPI001555259C (DUF4291 domain-containing protein n=1 Tax=Microcoleus asticus TaxID=2815231 RepID=UPI001555259C)

HSP 1 Score: 67.0 bits (162), Expect = 5.100e-9
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 1 
Query:   25 QHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMWFDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCS 279
            Q  ++TV++++     +G  A E G F G    E    RM W   +FL  M +S WGT PG+EVILAIW++RS  ++ LA+AV S
Sbjct:   25 QFDENTVVVYQAYRPAIGLFAAEQGYFGG----EFSLNRMSWIKPNFLWMMYRSEWGTKPGQEVILAIWLKRSAFDEILASAVYS 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19193.5312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNF9_ECTSI6.680e-15347.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNT4_9PHAE2.720e-12746.02FSH1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A0L0HTK0_SPIPD2.560e-1128.93FSH1 domain-containing protein n=1 Tax=Spizellomyc... [more]
F0ZPI1_DICPU7.420e-1128.00Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A355CDC2_9CYAN9.170e-1043.02DUF4291 domain-containing protein n=2 Tax=unclassi... [more]
K9VCI4_9CYAN1.140e-943.02Uncharacterized protein n=1 Tax=Oscillatoria nigro... [more]
H3AM14_LATCH2.470e-930.00Esterase OVCA2 n=5 Tax=Latimeria chalumnae TaxID=7... [more]
A0A817HGS6_9BILA2.550e-937.37Hypothetical protein n=2 Tax=Rotaria sp. Silwood2 ... [more]
A0A7X6CNM8_9CYAN3.080e-940.70DUF4291 domain-containing protein n=1 Tax=Microcol... [more]
UPI001555259C5.100e-942.35DUF4291 domain-containing protein n=1 Tax=Microcol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19193contigH-elongata_contig19193:335..6046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.9
Seed ortholog evalue1.5e-129
Seed eggNOG ortholog2880.D8LNF9
EggNOG free text desc.polyketide biosynthetic process
EggNOG OGsKOG2551@1,KOG2551@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1602
Cds size1602
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19193.5312.1prot_H-elongata_contig19193.5312.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19193 335..6046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930095.2605252-CDS-H-elongata_contig19193:334..4931622930095.2605252-CDS-H-elongata_contig19193:334..493Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 335..493 -
1691679278.273778-CDS-H-elongata_contig19193:334..4931691679278.273778-CDS-H-elongata_contig19193:334..493Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 335..493 -
1622930095.2744265-CDS-H-elongata_contig19193:1812..22441622930095.2744265-CDS-H-elongata_contig19193:1812..2244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 1813..2244 -
1691679278.28306-CDS-H-elongata_contig19193:1812..22441691679278.28306-CDS-H-elongata_contig19193:1812..2244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 1813..2244 -
1622930095.2890618-CDS-H-elongata_contig19193:2975..30681622930095.2890618-CDS-H-elongata_contig19193:2975..3068Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 2976..3068 -
1691679278.290972-CDS-H-elongata_contig19193:2975..30681691679278.290972-CDS-H-elongata_contig19193:2975..3068Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 2976..3068 -
1622930095.303173-CDS-H-elongata_contig19193:4308..45001622930095.303173-CDS-H-elongata_contig19193:4308..4500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 4309..4500 -
1691679278.3008616-CDS-H-elongata_contig19193:4308..45001691679278.3008616-CDS-H-elongata_contig19193:4308..4500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 4309..4500 -
1622930095.3176093-CDS-H-elongata_contig19193:4804..53581622930095.3176093-CDS-H-elongata_contig19193:4804..5358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 4805..5358 -
1691679278.3107715-CDS-H-elongata_contig19193:4804..53581691679278.3107715-CDS-H-elongata_contig19193:4804..5358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 4805..5358 -
1622930095.3350284-CDS-H-elongata_contig19193:5874..60461622930095.3350284-CDS-H-elongata_contig19193:5874..6046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 5875..6046 -
1691679278.3209286-CDS-H-elongata_contig19193:5874..60461691679278.3209286-CDS-H-elongata_contig19193:5874..6046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19193 5875..6046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19193.5312.1

>prot_H-elongata_contig19193.5312.1 ID=prot_H-elongata_contig19193.5312.1|Name=mRNA_H-elongata_contig19193.5312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=534bp
PSSSTWCLQHGQDTVLLFRTCCQHLGPHATETGSFRGSPCYEKDRTRMMW
FDTSFLVAMRKSAWGTLPGREVILAIWVRRSFLEDCLATAVCSNTFGGPA
DSEGTTAGGGGDGGGVGGTANPERGRVTSSSGPVSATISRDVLARGLVDG
RRALDATGDEDDATDEDKRPKDEKEGNPATEIAAQESSVLGLWRHGREGQ
EIGMRPRALSDSYTPLPSNGRLRMTDGVRVHWEPERLPSGEKHRTRRVVQ
MGLKGAWLHALGSGKEVVKIERLDGLVAEQRRALTSWKPQSLMVPVARPL
NVGHMESAQLEELLLVSKRARPKLRILCLHGYLQNSQLFRQRTRQLCRKL
RPTAELVYVDAPHLLSPEELSPLPLLSSPREEAAAAAVAAAAKAAAKLAT
TGEGGAPGGGEGMGIGTRMGWSPPRSPTATSPCGSDNSPQPRQQQKKQQA
RQDARTWWRCDPEERKRAKAVKGMTGRCEWKGLEESLEFLRRVWDEQGPF
DGMLGFSQGAAMASIFYHCSFSRTAKTQYPGGIG
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mRNA from alignment at H-elongata_contig19193:335..6046-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19193.5312.1 ID=mRNA_H-elongata_contig19193.5312.1|Name=mRNA_H-elongata_contig19193.5312.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5712bp|location=Sequence derived from alignment at H-elongata_contig19193:335..6046- (Himanthalia elongata Himel1 dioecious)
CCGTCCTCCTCCACTTGGTGCCTACAGCACGGGCAGGACACGGTGCTGCT
CTTCCGGACCTGCTGCCAACACCTGGGGCCCCATGCCACGGAAACGGGGA
GTTTTCGTGGCAGCCCCTGTTACGAGAAGGACCGCACGCGCATGATGTGG
TTCGACACCTCATTCCTTGTCGGTGAGCTTTGCTTGCTTGCTTGCTTGCT
TGAGCGCCTATCTGCACGGGTATCAAGCAGCGCGGCCTTCATCCTTTCGG
AGTCAGCGGATTTCCTCGGCGGCTTTTTTTTCGTCAAACCGATCCGAAGT
GTTTGGTTTGATTTGAAGTGAGATTATATTTGAGTTGATTTTAATTTAAT
TTAGTTAATTGGATTGAGTTGAATCGAATTTAGATTGGCATGTTATTTAA
CGTAACATTAAGAGCATTTAGAGCCTCGTCCAGCAGAGAACATGGATGGA
AAATCAAACAAAAAGCAGACTGTGTTTCACTGGTTGATACGGGATATAGA
TATGAGAGTCAGAGTGAGCGAAAAGGGTTACGCAACAGATCCCGTCTATC
CCGTCTATCCCGTCTATCCCGTCCGTGCAGCTTGCAAAGAGACCGCTTGC
GTCTTGTCCACCCGCGCAGCTCCCCCGCCCCCGCCTGCCCGCCTTCGATC
GTGCCGAAAATCGATTATTTTACCCCTGTGTCAACCAGCCATGCGCAAAT
CAGCCTGGGGCACCCTTCCTGGGCGAGAGGTGATCCTCGCCATCTGGGTC
CGCCGCTCCTTCCTGGAAGACTGTCTCGCCACCGCGGTCTGCTCGAACAC
GTTCGGCGGCCCTGCTGACTCAGAAGGGACGACCGCCGGTGGAGGTGGAG
ATGGTGGCGGCGTCGGTGGCACTGCCAATCCAGAGCGTGGCCGCGTGACC
TCCTCGTCGGGGCCGGTGTCGGCTACGATCTCTAGAGATGTGCTAGCTCG
TGGTCTGGTGGACGGCAGGCGTGCGCTCGACGCGACTGGGGATGAAGACG
ACGCGACTGACGAGGACAAGAGGCCAAAAGACGAGAAGGAGGGGAATCCG
GCCACCGAAATCGCCGCTCAGGAGAGCTCCGTCTTGGGGTTGTGGCGGCA
CGGGCGAGAAGGACAAGAAATCGGGATGAGACCGCGGGCCCTCTCCGACA
GCTACACGCCGCTGCCATCCAACGGGCGATTGCGGATGACGGACGGCGTG
CGCGTGCACTGGGAGCCGGAGCGGTTGCCCTCTGGCGAGAAGGTAACAAG
ACGGGGAAGTACCGCCAGACCGAGTAGCACACGTCGCCGATCGGGCAACC
GAACCGAACGGCCTCCAATCACGCGCGGAAAAAACAAAAGCAAGCAAGCA
TCTTCCTGAATGGGGAGAAAGAGAGGGACTGTATTTTTGTCCCTACGTAT
GACACCGCAAAATCGTGTAACGTCGTGTGTAAATGGTAGCCCCTCCCCAC
CCTCCCCTACCCCCATACAATACTTCCCCTGCCTCAGACCTTCGCCTTCT
CTCTTAATCTTCGACACTTGTTAACGTTACTCCGCCGCGCTCCCAGCACC
GCACCCGACGCGTGGTACAGATGGGGCTGAAAGGAGCGTGGCTCCACGCC
CTGGGGTCTGGCAAGGAGGTGGTGAAGATCGAGCGCCTTGACGGCCTCGT
GGCCGAACAGCGGCGGGCGCTGACGTCGTGGAAGCCTCAATCACTCATGG
TTCCGGTCGCAAGACCGCTCAACGTCGGCCACATGGAGGTGCGTGAGGAT
GGTGGTGCTGTCGCGCATGAAATTATCTAATAATTTTACAGCTCACTATC
TATTAAGGATCTGGTTTGTTTGGCGTCCTCATATAAATGACTTAGAGTGC
GCTAATAAGTGTAGATGTTTTGACAGTTCTACGTTGGACATACGTTTCTA
GGAAGGAACTTTCTACTAGATGTAGTCCAAAATGCATCAACCATGTGTTT
TACTTACCTATGCCCTCTAAAAAATATACTCTCGTGTGATTTTGTGGTCA
GAGGTAGTATTGTACACATTCGAACCTGACGATAGTTTGTCCCCTGGACT
GCATCTCTAACGATGCTAAGAAGGTGGGGATGTTCGGAGGGTTGGAATGA
GTTCATTTTTTTTAATGACGATGACATCCCCAGGTTATGCCGGTATTCAC
TTGTCTAATCCTTCTATACTGGACCGCTCCAAATCCCCATCCCCGACCCG
CGATGCCGAAACAAAGCTTCCGTACGGCGGCGCTAAGCTTTCGCAAGCTT
CTCCCTTATGTCTTCCTGTCTGTCGCGCTGCTATAGAGGCGTACGCTTCG
GTAAATGACATCCTGGCCTTACGCAGATGATACACGCTGCCTCTTCATTT
TGCCGTTTGCCTCAGCGAAATTATCCAGCGAGCCGAAGCGCGATGCAAGC
TCTGCTAATGGCGGTTGCACCCTCGACCCCTTTCCCTGCTCCTGCCTTCG
AAACATATGTTTCGAGGTCTAGCTCGTCATCAGAAGGATTGACATGTGTT
GTCTAAGATGTCCAGCGGATCCAGTCGATCTCCTCGATTTTCCCTAAACA
TACCCACGCCTGAGCCCTCTCGATGACGGCCTTGCCGGTAGGCTTGCGCG
GGGCGATGTCGACGTCCGGCGATCCCGATATAGCGCCACGATAGCACTAA
ATATATCGGGCCGATCTCGTGACAAGCTACTTTGGTGGCACTAAACTGGG
ACCGGGCACTATTCGGGGTAATACATCGTGACCGGCGGACCTCGACCGTA
TATCCTTTTAGAATGCTGACATGGATTTCATGCCGACTTCGCGTGTTCTT
TAATGTCTAAATCACCAAGCATCGTGTATGTGCTCTACGAAGCGTGTGTT
TGTACGTGCGTAAGTTATTGTGACGGCCGCTCCGCTCCTCCTTTCTCTTT
GCGCCTTGATGATGCTATATGCTATATGCTATATGCTATATACTATATGC
TATATGCTATATGCTATATGCTATACAGAGCGCTCAGCTGGAGGAGCTTC
TCCTGGTGAGCAAGAGGGCGCGGCCGAAGCTTCGGATCCTCTGTCTTCAC
GGCTACCTCCAAAACAGTCAGGTCAGAAATAAATAAAGAGAGAGAGCTAG
AGAGATAAGCGCTTAATTAGGAGGCTGGGCACCTGCAGTGCGAGTTGCGT
GGTCGCTCTTGCGGTGTCTCTTACCCTCCCCCTTCCCCCATCGCCTCTTT
GGATATCGATTATCGATATCGATGGAGCTGTCAGCCGTCAGCAGTGTCGA
TGGAGCCGTCAGCAGTCAGCACAGCGGAACCGAAACGAGTAAATTATTCA
AGCAGTTCGAGCTAGGGAAAGCGTTCGTTTCCGAGTTGTTTGCAATGGTG
CCCGAATAGGCTAGTATGGATTAAGAGAAGCGTTTTTATGATCTGTTTTT
TTATCCGTTCCGGGCCACAGGGTAATGGTGACGTCAGCACGTGCGCGATA
TCGACCGCCCGTTTCTCCCGTTCAAGACCCGCCTTTAACCTTGCAAGGAG
AGAACCGCCGCGAAACGCTGCAGCCATCCATCCTGTCCGCGACCGCTTTA
TCTCCATATTTTTCTCTCTCTCGTTTTCTCTCTCTTTCTGTCATAGTCTC
TCTCTCTCTCTATTTCTCTCTCTCTCTTTCCCTCCCTCTCGTGCCCCCTT
CCTCCATGTATCCATGTATCTTCCATTTTAAAATATTTCTCGAATGTATT
GTGTTCCACAAGTGTCTGCCATGTCTTTTTAGCGATTTAATGCACTACTC
ACGATCTGTCTGTCTATTTCGTATATTGCTTCTTCCGGTGTTGGAGCCTC
AGCTCTTCCGCCAGCGAACGCGACAGCTGTGCCGGAAGCTTCGTCCTACC
GCGGAGTTGGTGTACGTAGACGCTCCGCACCTGCTAAGCCCGGAAGAGCT
GTCCCCCCTCCCTCTCCTGTCCTCCCCTCGCGAGGAGGCGGCGGCGGCGG
CCGTCGCTGCCGCCGCCAAGGCAGCAGCGAAGCTGGCCACCACGGGGGAA
GGTGGAGCACCCGGTGGCGGGGAAGGGATGGGAATAGGAACGAGGATGGG
TTGGTCACCCCCGCGTTCTCCGACAGCGACGAGCCCTTGTGGTAGCGATA
ATTCACCGCAGCCTCGGCAGCAGCAGAAGAAACAGCAGGCTAGGCAGGAC
GCGCGCACATGGTGGAGGTGCGATCCGGAGGAGAGGAAGAGGGCCAAGGC
GGTCAAGGGAATGACGGGTCGCTGCGAGTGGAAGGTAGGTTACGGTTATG
GTTTTGTTGAGGTACGGTATGATATAGTATGGTAAGGTGTAAGGCTTGGT
ATGTCGGGGAGTGATAATTGTGACTACGAAGTCACAATTTAGTTTGTGAC
TACGGGAGAAAATTGCAAAAAACGTTAATTTCATGCATTCATGCAGAGTA
AAATACCCGTTCCTCTGAAACCATTATATACTGGCTGACCCAGCCCGCCC
ACAACCCTAACCCTAACCCACACCACCCACCCATGGCGTGCATTTTTGAA
TTCTGGGAACCATAATTTGATGGTGGAAACCCGGGGATGAACCTTATATG
TCCCCGTAGCCACAAACTAATTTGTGACTATGTAGTCATAATTATTAATT
TCCTGGTATGTCATGGTAGAGTTACGGTATTGAACGATATGGTGTATTGT
GGGAGGTTATGGCATGGAATATGGTACGGAAATGTAAGGTAAGACACGGA
ATATCAATGGCATGATATGGTATGGTGAGTTATGTTACGGTAAGGTAAGG
TACGGAGAGGCATCCCTGTTTTGCCGTCGTCTCTGAATCATCAACTTTCA
ATTCAAGTGTGCTGGTAGAAAACACACTGATCCATGGGAACCGAATCCCG
CACGCTTCCACGGAAAACACGTCTGACAAAATGGGGGGAGGGGGCGGACG
GGGAGCGGAGCGTGCTCAAGTTTTGGATGTCCTTGTCTGCAATGGACCCT
TTCAGTGTGTTTCTATTTTTCTTCTATTTTTGTGTTTTTTCCTTCATGTT
TGCCCTGTTCGGAATTCGAGAAGCAGTATTGCCCAATCGTCAATCGCCAA
TCGTCAATCGTCATAGTTATGCCATAGAATACCACCACCAACAGCATGTG
TTTGACCATTAACTATTGATCATTGATCACGATTACCGTTACCATCACCG
TTACCATCACCGTTACCGTTACCGTTAGTTTTCGGTACGGAGGGGATGGG
AGGGAGGGAGCATTAGTATTTTTCCTACACCATCGATCGCTGAAAAATCG
TTTTTAGTATCCTAAGCTTTCGCTTTCTCCGGCCTCTCTTTATTATCCCC
CAGTATAGCTATTAATAGCTTCCAACTTAGCCTAGCTACCCCGTTCTTCA
ACATCCCCCCCCCCCATTTCAATCATATAATATTTCATTCACGGGGGGCG
GGGGATGGGAGTGGGAGTTGCAATAGATATTGCTGAAGTGAGTTAGGTAG
GTGATGTGCAGGGGGAGTTGGTGGTTTGACATCGTATAAATGGTATCCCA
CAACGGCCGGCTCCGTGACTCGCACCGTGACACGATCTATCAATCCCGCG
CAGGGTCTCGAGGAGAGCTTGGAGTTCTTGCGCAGGGTCTGGGATGAACA
GGGCCCCTTCGATGGCATGCTTGGTTTCAGTCAGGGCGCGGCCATGGCGA
GCATATTCTATCACTGCTCCTTCAGCCGGACCGCGAAGACCCAATACCCC
GGAGGAATTGGC
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Coding sequence (CDS) from alignment at H-elongata_contig19193:335..6046-

>mRNA_H-elongata_contig19193.5312.1 ID=mRNA_H-elongata_contig19193.5312.1|Name=mRNA_H-elongata_contig19193.5312.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3204bp|location=Sequence derived from alignment at H-elongata_contig19193:335..6046- (Himanthalia elongata Himel1 dioecious)
CCGTCCTCCTCCACTTGGTGCCTACAGCACGGGCAGGACACGGTGCTGCT
CTTCCGGACCTGCTGCCAACACCTGGGGCCCCATGCCACGGAAACGGGGA
GTTTTCGTGGCAGCCCCTGTTACGAGAAGGACCGCACGCGCATGATGTGG
TTCGACACCTCATTCCTTGTCGCCGTCCTCCTCCACTTGGTGCCTACAGC
ACGGGCAGGACACGGTGCTGCTCTTCCGGACCTGCTGCCAACACCTGGGG
CCCCATGCCACGGAAACGGGGAGTTTTCGTGGCAGCCCCTGTTACGAGAA
GGACCGCACGCGCATGATGTGGTTCGACACCTCATTCCTTGTCGCCATGC
GCAAATCAGCCTGGGGCACCCTTCCTGGGCGAGAGGTGATCCTCGCCATC
TGGGTCCGCCGCTCCTTCCTGGAAGACTGTCTCGCCACCGCGGTCTGCTC
GAACACGTTCGGCGGCCCTGCTGACTCAGAAGGGACGACCGCCGGTGGAG
GTGGAGATGGTGGCGGCGTCGGTGGCACTGCCAATCCAGAGCGTGGCCGC
GTGACCTCCTCGTCGGGGCCGGTGTCGGCTACGATCTCTAGAGATGTGCT
AGCTCGTGGTCTGGTGGACGGCAGGCGTGCGCTCGACGCGACTGGGGATG
AAGACGACGCGACTGACGAGGACAAGAGGCCAAAAGACGAGAAGGAGGGG
AATCCGGCCACCGAAATCGCCGCTCAGGAGAGCTCCGTCTTGGGGTTGTG
GCGGCACGGGCGAGAAGGACAAGAAATCGGGATGAGACCGCGGGCCCTCT
CCGACAGCTACACGCCGCTGCCATCCAACGGGCGATTGCGGATGACGGAC
GGCGTGCGCGTGCACTGGGAGCCGGAGCGGTTGCCCTCTGGCGAGAAGCC
ATGCGCAAATCAGCCTGGGGCACCCTTCCTGGGCGAGAGGTGATCCTCGC
CATCTGGGTCCGCCGCTCCTTCCTGGAAGACTGTCTCGCCACCGCGGTCT
GCTCGAACACGTTCGGCGGCCCTGCTGACTCAGAAGGGACGACCGCCGGT
GGAGGTGGAGATGGTGGCGGCGTCGGTGGCACTGCCAATCCAGAGCGTGG
CCGCGTGACCTCCTCGTCGGGGCCGGTGTCGGCTACGATCTCTAGAGATG
TGCTAGCTCGTGGTCTGGTGGACGGCAGGCGTGCGCTCGACGCGACTGGG
GATGAAGACGACGCGACTGACGAGGACAAGAGGCCAAAAGACGAGAAGGA
GGGGAATCCGGCCACCGAAATCGCCGCTCAGGAGAGCTCCGTCTTGGGGT
TGTGGCGGCACGGGCGAGAAGGACAAGAAATCGGGATGAGACCGCGGGCC
CTCTCCGACAGCTACACGCCGCTGCCATCCAACGGGCGATTGCGGATGAC
GGACGGCGTGCGCGTGCACTGGGAGCCGGAGCGGTTGCCCTCTGGCGAGA
AGCACCGCACCCGACGCGTGGTACAGATGGGGCTGAAAGGAGCGTGGCTC
CACGCCCTGGGGTCTGGCAAGGAGGTGGTGAAGATCGAGCGCCTTGACGG
CCTCGTGGCCGAACAGCGGCGGGCGCTGACGTCGTGGAAGCCTCAATCAC
TCATGGTTCCGGTCGCAAGACCGCTCAACGTCGGCCACATGGAGCACCGC
ACCCGACGCGTGGTACAGATGGGGCTGAAAGGAGCGTGGCTCCACGCCCT
GGGGTCTGGCAAGGAGGTGGTGAAGATCGAGCGCCTTGACGGCCTCGTGG
CCGAACAGCGGCGGGCGCTGACGTCGTGGAAGCCTCAATCACTCATGGTT
CCGGTCGCAAGACCGCTCAACGTCGGCCACATGGAGAGCGCTCAGCTGGA
GGAGCTTCTCCTGGTGAGCAAGAGGGCGCGGCCGAAGCTTCGGATCCTCT
GTCTTCACGGCTACCTCCAAAACAGTCAGAGCGCTCAGCTGGAGGAGCTT
CTCCTGGTGAGCAAGAGGGCGCGGCCGAAGCTTCGGATCCTCTGTCTTCA
CGGCTACCTCCAAAACAGTCAGCTCTTCCGCCAGCGAACGCGACAGCTGT
GCCGGAAGCTTCGTCCTACCGCGGAGTTGGTGTACGTAGACGCTCCGCAC
CTGCTAAGCCCGGAAGAGCTGTCCCCCCTCCCTCTCCTGTCCTCCCCTCG
CGAGGAGGCGGCGGCGGCGGCCGTCGCTGCCGCCGCCAAGGCAGCAGCGA
AGCTGGCCACCACGGGGGAAGGTGGAGCACCCGGTGGCGGGGAAGGGATG
GGAATAGGAACGAGGATGGGTTGGTCACCCCCGCGTTCTCCGACAGCGAC
GAGCCCTTGTGGTAGCGATAATTCACCGCAGCCTCGGCAGCAGCAGAAGA
AACAGCAGGCTAGGCAGGACGCGCGCACATGGTGGAGGTGCGATCCGGAG
GAGAGGAAGAGGGCCAAGGCGGTCAAGGGAATGACGGGTCGCTGCGAGTG
GAAGCTCTTCCGCCAGCGAACGCGACAGCTGTGCCGGAAGCTTCGTCCTA
CCGCGGAGTTGGTGTACGTAGACGCTCCGCACCTGCTAAGCCCGGAAGAG
CTGTCCCCCCTCCCTCTCCTGTCCTCCCCTCGCGAGGAGGCGGCGGCGGC
GGCCGTCGCTGCCGCCGCCAAGGCAGCAGCGAAGCTGGCCACCACGGGGG
AAGGTGGAGCACCCGGTGGCGGGGAAGGGATGGGAATAGGAACGAGGATG
GGTTGGTCACCCCCGCGTTCTCCGACAGCGACGAGCCCTTGTGGTAGCGA
TAATTCACCGCAGCCTCGGCAGCAGCAGAAGAAACAGCAGGCTAGGCAGG
ACGCGCGCACATGGTGGAGGTGCGATCCGGAGGAGAGGAAGAGGGCCAAG
GCGGTCAAGGGAATGACGGGTCGCTGCGAGTGGAAGGGTCTCGAGGAGAG
CTTGGAGTTCTTGCGCAGGGTCTGGGATGAACAGGGCCCCTTCGATGGCA
TGCTTGGTTTCAGTCAGGGCGCGGCCATGGCGAGCATATTCTATCACTGC
TCCTTCAGCCGGACCGCGAAGACCCAATACCCCGGAGGAATTGGCGGTCT
CGAGGAGAGCTTGGAGTTCTTGCGCAGGGTCTGGGATGAACAGGGCCCCT
TCGATGGCATGCTTGGTTTCAGTCAGGGCGCGGCCATGGCGAGCATATTC
TATCACTGCTCCTTCAGCCGGACCGCGAAGACCCAATACCCCGGAGGAAT
TGGC
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