prot_H-elongata_contig191737.5305.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig191737.5305.1
Unique Nameprot_H-elongata_contig191737.5305.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Match: A0A6H5JBE8_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE8_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.060e-16
Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    1 QDIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDANTVTGVPAVPQRPSQLARIFQ 68
            QD+E+DAS EDLPVEWVKKQR NGS YY++VMTGA Q +SPN   DA    G  A P   S L RIFQ
Sbjct:  429 QDVEIDASGEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNRLDDA----GGAAPPPSNSALRRIFQ 492          
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Match: D7FP34_ECTSI (Similar to neural cell expressed, developmentally down-regulated 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP34_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.220e-16
Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    1 QDIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDANTVTGVPAVPQRPSQLARIFQ--TSPRPQS 75
            QD+E+DAS EDLPVEWVKKQR NGS YY++VMTGA Q +SPN   +A    G  A P   S L RIFQ   S RP S
Sbjct:  376 QDVEIDASEEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNHLDNA----GGSAPPPSNSALGRIFQGNRSARPNS 448          
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Match: D8LQB8_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB8_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.830e-11
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    2 DIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDANTVTGVPAVPQRPSQLARIFQ 68
            D+E+DAS EDLP+ WVK+QRKNG+ YYY+++TG  +E+SP     A    GV   P+R S +AR F+
Sbjct:  389 DVEIDASNEDLPIGWVKRQRKNGTTYYYNLLTGDARENSPTE-AHAVVAVGVTPAPKRRS-IARAFR 453          
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Match: D7FP33_ECTSI (E3 ubiquitin-protein ligase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP33_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.910e-11
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 QDIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDA 47
            QDIE+DAS EDLP +WVKKQR NGS YY+H +TG  Q + P+  G A
Sbjct:  382 QDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSA 428          
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Match: A0A6H5JSI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI3_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 5.330e-11
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    2 DIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDANTVTGVPAVPQRPSQLARIFQTSPRP 73
            D+E+D S EDLP+ WVK+QRKNG+ YYY+ +TG  +E+SP     A    GV   P+R S +AR F+ +  P
Sbjct:  420 DVEIDTSNEDLPIGWVKRQRKNGTTYYYNPLTGDARENSPTE-AHAVVAVGVTPAPERRS-IARAFRAAHNP 489          
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Match: A0A6H5JZ12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ12_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 9.990e-11
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 QDIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDA 47
            QDIE+D+S EDLP +WVKKQR NGS YY+H +TG  Q + P+  G A
Sbjct:  412 QDIELDSSEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSA 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig191737.5305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JBE8_9PHAE2.060e-1663.24WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FP34_ECTSI5.220e-1659.74Similar to neural cell expressed, developmentally ... [more]
D8LQB8_ECTSI2.830e-1150.75WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
D7FP33_ECTSI3.910e-1161.70E3 ubiquitin-protein ligase, putative n=1 Tax=Ecto... [more]
A0A6H5JSI3_9PHAE5.330e-1147.22WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A6H5JZ12_9PHAE9.990e-1159.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 12..66
e-value: 2.5E-5
score: 26.2
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 10..43
score: 8.63
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 8..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig191737contigH-elongata_contig191737:3..764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig191737.5305.1mRNA_H-elongata_contig191737.5305.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig191737 3..765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig191737.5305.1 ID=prot_H-elongata_contig191737.5305.1|Name=mRNA_H-elongata_contig191737.5305.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
QDIEVDASAEDLPVEWVKKQRKNGSFYYYHVMTGATQESSPNGFGDANTV
TGVPAVPQRPSQLARIFQTSPRPQSIAPLDR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf