prot_H-elongata_contig19157.5300.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19157.5300.1
Unique Nameprot_H-elongata_contig19157.5300.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length567
Homology
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 6.290e-132
Identity = 298/585 (50.94%), Postives = 348/585 (59.49%), Query Frame = 0
Query:   37 AAFDPNIPSTPGYAMASNVGSVLG---DEDMIVVGMP-RGARRGLDASGNDGEGNEMD--TTRAIDAHAAFEVETAAARDPEESMLYQKASIHLSKKFKVHLTPTQLWRVLALFQIQGRQLVAFGLAPHSALNINTDPSSTGEGSDVY--ESTTGERCGMKRNKSYMAQSAVVNPVHDLLALNGVPMPEDEVQPLLEALRVRPRQLVKRGLLPQEILAEMPDGH-----GGPRGGPHGRHMHSHREHFGHEGAGRGRGGRGPHP---------------FRPPHMHPHRAHXXXXXXXXXHGIEESYPVPPHLGVGGPHVPPXXMAXXXXXXXXPSHMQDGAHGGAGWWPHGHPGDMRGPHGHGPHPH--------------LW-HGPPGXHSYGGGFGGPPGMXXXXXXXXPWAGHHXXGGGGY------------GGPRKGFGKGNKDNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLVPVSQSCQDLSSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDVNAAVEKLSLDD-GHKD 565
            +A  P+IPSTPGYA+ASNVGS +G   + DMI+V MP   A      SG   +G++ D     AI+  AAFE E AAARDPE S+LYQKAS+ L+K+FKVHLTPTQLWRV+ALFQIQGRQLV FGLAPH +L+     +S  + SD    E+      G+KR+KS +A + V + V  LL LNGV +PEDEVQPLL+ALRVR R+LV+ GLL  E L +MPDGH      GPRGGP G  MH H    G   AGRG       P               + PP  H       XXXXX   G     P              XX  XXXXXXXX                                                +W HGPPG + + GGF G PG   XXXXXX      XX                 G  ++GFGKG KDNMAMARFV+H+SGSD T VA+G  FKKSWLVRNDSTT WPETC L+PVSQSC DLSSPPEAP+VGDV+PGEE TVSVDL+AP QPGMYEGYWR CDD+ R+FGQRLWAK MVVG GE+VNAAVE+LSL++ G+KD
Sbjct:  103 SAAPPSIPSTPGYAVASNVGSAVGGGDEPDMIMVDMPGEAAAAAAGPSGGSVDGSQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKASMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDAAAAAASDLDSSDEEGGENKPSAVRGLKRSKSQVAGTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDAKGPRGGPPGHPMHGHGHGPGGRFAGRGXXXXXXXPPFGXXXXXXLMMPFHWPPPFHHQXXXXSGXXXXXVAEGATHRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMWQHGPPG-YDFAGGFPGAPGAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAKRGFGKGTKDNMAMARFVSHTSGSDVTKVAAGQAFKKSWLVRNDSTTTWPETCSLIPVSQSCTDLSSPPEAPIVGDVSPGEEVTVSVDLVAPPQPGMYEGYWRACDDASRKFGQRLWAKVMVVGPGEEVNAAVERLSLEENGNKD 686          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: D8LFK8_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK8_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.220e-74
Identity = 117/148 (79.05%), Postives = 132/148 (89.19%), Query Frame = 0
Query:  419 GGPRKGFGKGNKDNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLVPVSQSCQDLSSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDVNAAVEKLSLDD-GHKD 565
            G  ++GFGKG KDNMAMARFV+H+SGSD T VA+G  FKKSWLVRNDSTT WPETC L+PVSQSC DLSSPPEAP+VGDV+PGEEATVSVDL+AP QPGMYEGYWR CDD+ RRFGQRLWAK MVVG GE+VNAAVE+LSL++ G+KD
Sbjct:   66 GAAKRGFGKGTKDNMAMARFVSHTSGSDVTKVAAGQAFKKSWLVRNDSTTTWPETCSLIPVSQSCTDLSSPPEAPIVGDVSPGEEATVSVDLVAPPQPGMYEGYWRACDDASRRFGQRLWAKVMVVGPGEEVNAAVERLSLEENGNKD 213          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 5.220e-66
Identity = 146/262 (55.73%), Postives = 175/262 (66.79%), Query Frame = 0
Query:   37 AAFDPNIPSTPGYAMASNVGSVLG---DEDMIVVGMPRGARRGLDA--SGNDGEGNEMD--TTRAIDAHAAFEVETAAARDPEESMLYQKASIHLSKKFKVHLTPTQLWRVLALFQIQGRQLVAFGLAPHSALNINTDPSSTGEGSDVYESTT--GERC-----GMKRNKSYMAQSAVVNPVHDLLALNGVPMPEDEVQPLLEALRVRPRQLVKRGLLPQEILAEMPDGH-----GGPRGGPHGRHMHSHREHFGHEGAGRG 279
            +A  P+IPSTPGYA+ASNVGSV+G   D DMI+V MP  A     A  SG   +G++ D     AI+  AAFE E AAARDPE S+LYQK+S+ L+K+FKVHLTPTQLWRV+ALFQIQGRQLV FGLAPH +L    D S++   SDV  S    GE       G+KR+KS +A++ V + V  LL LNGV +P DEVQPLL+ALRVR R+LV+ GLL  E L +MPDGH      GPRGGP G  MH H    G    GRG
Sbjct:   76 SAAPPSIPSTPGYAVASNVGSVVGGGDDADMIMVDMPGEAAAAAAAGPSGGSVDGSQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKSSMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSL----DASASAAASDVDSSDEEGGENKPSAVRGLKRSKSQVARTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGPRGGPPGHPMHGHXXXPGGRFGGRG 333          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: A0A1V9ZB25_9STRA (UBA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB25_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.790e-14
Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 0
Query:  431 DNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLVPVSQSCQDLSSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGE 548
            D+   A FV   S  D +TV +G+TF K+W ++ND  T WP T  LV V     +  S  E   +  + PG+   VSV++ APS+P  Y G+WR+     +RFGQR W   +VVGSG+
Sbjct:  340 DSKPSAAFVGDVSFPDGSTVRAGDTFVKTWRLKNDGKTRWPSTTELVWVGGVHLETKS--ERLPIPILPPGKMIDVSVEMQAPSKPARYTGFWRLSSADGKRFGQRFWVDILVVGSGK 455          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: A0A7S0MRM9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MRM9_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 1.990e-14
Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 0
Query:  435 MARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPE-TCYLVPVSQSCQDLSSPPEA-PVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDVNAAVEKLSLDDGHKD 565
            MARFV H +  +   + +G    K+W VRNDS  AWP+    LV VS    D  +P +A PV   +APGEE  +SV++ AP+ PG+Y+G+WR+      +FGQRL    +V    +D  A +     D   +D
Sbjct:  146 MARFVDHVTLQEGEKIPAGERCTKTWRVRNDSPRAWPDGPIELVYVSGKASDRLTPQDAYPVEAKLAPGEETELSVEITAPTAPGLYQGFWRLRGPKGCKFGQRLGCSVLV----KDDEAVISDSDHDSSEED 274          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: W2PAG6_PHYPN (UBA domain-containing protein (Fragment) n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PAG6_PHYPN)

HSP 1 Score: 83.6 bits (205), Expect = 2.060e-14
Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 0
Query:  422 RKGFGKGNKDNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLV--PVSQSCQD--LSSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVG 545
            R G G+  +D+   ARF+   +  D T V++    +K W + ND   +WP+ CY++  P +    D   SS  + P +   APGEE    VDL+AP++PG Y  +WRVCD +   FG R W   +V G
Sbjct:    9 RHGRGRCGRDSDLEARFLEDVTIEDGTVVSAAQPLRKMWKLVNDGERSWPDGCYMITQPGNPMFPDDRKSSRIDLPAL---APGEEFIAGVDLVAPTEPGRYASFWRVCDPADVSFGHRFWIDIVVAG 133          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: D0MQN9_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MQN9_PHYIT)

HSP 1 Score: 87.4 bits (215), Expect = 2.630e-14
Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 0
Query:  446 DTTTVASGNTFKKSWLVRNDSTTAWPETCYLV--PVSQSCQDL-SSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDVNAAVEKLSLDDG 562
            D T V +G   +K W + ND   AWP+ CY++  P +    D  SS  E P +   APG+E    VDL+APSQPG Y  +WRVCD +   FG R W   +VVG+    +   E  + D G
Sbjct:  584 DGTVVEAGKPLRKMWKLVNDGERAWPDGCYMITQPGNPMFPDRESSRIELPAL---APGQEYIAGVDLVAPSQPGRYPNFWRVCDPADASFGHRFWIDIVVVGNSIAESTPSEAPTADSG 700          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: A0A024TN25_9STRA (UBA domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN25_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 4.420e-14
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 0
Query:  431 DNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLVPVSQSCQDLS-SPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVG 545
            DN   A FV   S  D +T+ +G++F K+W ++ND  T WP    LV V     ++  S    P+V    PG+   VSV++ APS+P  Y GYWR+C    +R+GQRLW   +VVG
Sbjct:  350 DNKPSAAFVGDVSFPDGSTIRAGDSFLKTWRLKNDGKTRWPAKSRLVCVGGDHLEIGDSFVSVPIV---PPGKMIDVSVEMKAPSKPARYTGYWRLCTADGKRYGQRLWVDILVVG 462          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: A0A485LEZ8_9STRA (Aste57867_20135 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEZ8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.930e-14
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 0
Query:  431 DNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLVPVSQSCQDLSSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDV 550
            D+   A FV   S  D +T+ +G+TF K+W ++ND  T WP    LV V     ++    ++  V  + PG+   VSVD+ AP +P  Y GYWR+C    +R+G RLW   +VVG  E V
Sbjct:  344 DSKPSASFVGDVSFPDGSTIRAGDTFVKTWRLKNDGKTRWPAKSRLVCVGGDHLEVGE--DSVSVPILLPGKMIDVSVDMQAPIKPARYTGYWRLCTADGKRYGHRLWVDILVVGKPEVV 461          
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Match: A0A6G0WW99_9STRA (UBA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW99_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.860e-13
Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 0
Query:  431 DNMAMARFVAHSSGSDTTTVASGNTFKKSWLVRNDSTTAWPETCYLVPVS----QSCQDLSSPPEAPVVGDVAPGEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDVNA 552
            DN   A FV   S  D +T+ +G+TF K+W ++ND  T WP    LV V     +  +D  S P  P      PG+   VSV++ AP++   Y GYWR+C    +R+G RLW   +VVG  E V +
Sbjct:  343 DNKPSAGFVGDVSFPDGSTIRAGDTFVKTWRLKNDGKTRWPAKSRLVCVGGDHLEVGEDFVSVPIVP------PGKMIDVSVEMRAPNKAARYTGYWRLCTADGKRYGHRLWVDILVVGKPEVVKS 462          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19157.5300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTZ0_9PHAE6.290e-13250.94PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LFK8_ECTSI1.220e-7479.05N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
D8LFK7_ECTSI5.220e-6655.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9ZB25_9STRA1.790e-1440.68UBA domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A7S0MRM9_9CHLO1.990e-1438.35Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
W2PAG6_PHYPN2.060e-1436.72UBA domain-containing protein (Fragment) n=1 Tax=P... [more]
D0MQN9_PHYIT2.630e-1440.00Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A024TN25_9STRA4.420e-1440.52UBA domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A485LEZ8_9STRA7.930e-1438.33Aste57867_20135 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WW99_9STRA1.860e-1338.10UBA domain-containing protein n=1 Tax=Aphanomyces ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032350Next to BRCA1, central domainPFAMPF16158N_BRCA1_IGcoord: 445..540
e-value: 1.0E-24
score: 87.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 429..548
e-value: 9.0E-26
score: 92.2
NoneNo IPR availablePANTHERPTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDcoord: 430..543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19157contigH-elongata_contig19157:1745..3445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19157.5300.1mRNA_H-elongata_contig19157.5300.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19157 194..5653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19157.5300.1 ID=prot_H-elongata_contig19157.5300.1|Name=mRNA_H-elongata_contig19157.5300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=567bp
MMAGTPHHPSPHTPSHEPVQRPHQRSHLGPPRHAPPAAFDPNIPSTPGYA
MASNVGSVLGDEDMIVVGMPRGARRGLDASGNDGEGNEMDTTRAIDAHAA
FEVETAAARDPEESMLYQKASIHLSKKFKVHLTPTQLWRVLALFQIQGRQ
LVAFGLAPHSALNINTDPSSTGEGSDVYESTTGERCGMKRNKSYMAQSAV
VNPVHDLLALNGVPMPEDEVQPLLEALRVRPRQLVKRGLLPQEILAEMPD
GHGGPRGGPHGRHMHSHREHFGHEGAGRGRGGRGPHPFRPPHMHPHRAHG
RGPHPHGPHGIEESYPVPPHLGVGGPHVPPPHMAAAHSPPPPPSHMQDGA
HGGAGWWPHGHPGDMRGPHGHGPHPHLWHGPPGPHSYGGGFGGPPGMMGG
GYGWGPWAGHHGGGGGGYGGPRKGFGKGNKDNMAMARFVAHSSGSDTTTV
ASGNTFKKSWLVRNDSTTAWPETCYLVPVSQSCQDLSSPPEAPVVGDVAP
GEEATVSVDLIAPSQPGMYEGYWRVCDDSQRRFGQRLWAKAMVVGSGEDV
NAAVEKLSLDDGHKDK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032350N_BRCA1_central
IPR013783Ig-like_fold