prot_H-elongata_contig191527.5298.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig191527.5298.1
Unique Nameprot_H-elongata_contig191527.5298.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
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BLAST of mRNA_H-elongata_contig191527.5298.1 vs. uniprot
Match: D8LHK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK6_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 4.080e-27
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0 
Query:    1 VPEILRHKRLRVVFTTEIHGYNLELLYSHCRTVAPCLLVVEAENGAVIGGFCSDPWQ 57
            VPEILRHKRLRVVFTTEIHGYNL+LLYSHCRTV+P LLVVEA NG ++GGFCSD WQ
Sbjct:  399 VPEILRHKRLRVVFTTEIHGYNLDLLYSHCRTVSPSLLVVEAANGVILGGFCSDSWQ 455
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BLAST of mRNA_H-elongata_contig191527.5298.1 vs. uniprot
Match: UPI00186AE43F (MTOR-associated protein MEAK7 n=1 Tax=Trichosurus vulpecula TaxID=9337 RepID=UPI00186AE43F)

HSP 1 Score: 52.4 bits (124), Expect = 2.930e-6
Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:    1 VPEILRHKRLRVVFTTEIHGYNLELLYSHCRTVAPCLLVVEAENGAVIGGFCSDPWQVK 59
            +P  L+H   +++F+++IHGYN   L  +     PCLLVV+  +G + GGF S  W VK
Sbjct:  260 LPTKLQHT-WKLIFSSQIHGYNFAKLCGNIVGRGPCLLVVKDRDGYIFGGFSSHSWAVK 317
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BLAST of mRNA_H-elongata_contig191527.5298.1 vs. uniprot
Match: G3WVI3_SARHA (TLDc domain-containing protein n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WVI3_SARHA)

HSP 1 Score: 51.2 bits (121), Expect = 7.500e-6
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0 
Query:   11 RVVFTTEIHGYNLELLYSHCRTVAPCLLVVEAENGAVIGGFCSDPWQVK 59
            R++F+++IHGYN   L        PCLLVV+ ++G + GGF S  W VK
Sbjct:  268 RLIFSSQIHGYNFAKLCGSIIGRGPCLLVVKDKDGYIFGGFSSLSWAVK 316
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig191527.5298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHK6_ECTSI4.080e-2785.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI00186AE43F2.930e-640.68MTOR-associated protein MEAK7 n=1 Tax=Trichosurus ... [more]
G3WVI3_SARHA7.500e-644.90TLDc domain-containing protein n=1 Tax=Sarcophilus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006571TLDc domainPFAMPF07534TLDcoord: 13..59
e-value: 8.2E-8
score: 32.6
NoneNo IPR availablePANTHERPTHR23354NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATEDcoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig191527contigH-elongata_contig191527:2..196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig191527.5298.1mRNA_H-elongata_contig191527.5298.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig191527 2..196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig191527.5298.1 ID=prot_H-elongata_contig191527.5298.1|Name=mRNA_H-elongata_contig191527.5298.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
VPEILRHKRLRVVFTTEIHGYNLELLYSHCRTVAPCLLVVEAENGAVIGG
FCSDPWQVKITCYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom