prot_H-elongata_contig191459.5295.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI) HSP 1 Score: 85.9 bits (211), Expect = 2.460e-17 Identity = 42/108 (38.89%), Postives = 71/108 (65.74%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSK--IPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENPG 106
+ +A Y +G I RDR R L + Q +Y++++++++ ++ + +P +GV TLS+ D P+ PEE+E M + Y AVGA+M+T+T TRPD+A A+ +R+ NPG
Sbjct: 536 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPG 642
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 85.9 bits (211), Expect = 2.510e-17 Identity = 42/108 (38.89%), Postives = 71/108 (65.74%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSK--IPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENPG 106
+ +A Y +G I RDR R L + Q +Y++++++++ ++ + +P +GV TLS+ D P+ PEE+E M + Y AVGA+M+T+T TRPD+A A+ +R+ NPG
Sbjct: 930 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPG 1036
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A438BR63_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BR63_VITVI) HSP 1 Score: 84.3 bits (207), Expect = 2.970e-17 Identity = 41/108 (37.96%), Postives = 70/108 (64.81%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSK--IPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENPG 106
+ +A Y +G I RDR R L + Q +Y++++++++ ++ + +P +GV TLS+ D P+ PEE+E M + Y AVGA+M+T+T TRPD+ A+ +R+ NPG
Sbjct: 17 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVTYALSVASRYQANPG 123
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR) HSP 1 Score: 79.3 bits (194), Expect = 4.600e-15 Identity = 40/108 (37.04%), Postives = 70/108 (64.81%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSK--IPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENPG 106
+ +A Y +G I RDR R L + Q +Y++++++++ ++K + +P GV +LS+ + P+ EE+E M + Y AVGA+M+T+T TRPD+A A+ +R+ NPG
Sbjct: 319 LGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPG 425
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A6H5KDF0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDF0_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 4.880e-15 Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSKIPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENP 105
+ D ++Y G RD AR LKI Q Y E + +F V+ G +IP +G+ LS+ D + EE+ +++R+ +G+LMW T TRPDIA+AVRAVAR+ +P
Sbjct: 656 LGDLRWYSGCFYERDWDARTLKISQQTYAEELGMEFGVEYGKEIPLPAGL-KLSEFD------QDEEVVSWSFRELIGSLMWLATQTRPDIANAVRAVARYFASP 753
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 5.720e-15 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSKIPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENP 105
+ D ++Y G RD A LKI Q Y E + +F V+ G +IP G+ LS+ D + EE+ + +R+ +G+LMW T TRPDIA+AVRAVAR+C +P
Sbjct: 93 LGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 190
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 5.740e-15 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSKIPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENP 105
+ D ++Y G RD A LKI Q Y E + +F V+ G +IP G+ LS+ D + EE+ + +R+ +G+LMW T TRPDIA+AVRAVAR+C +P
Sbjct: 152 LGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 249
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 6.480e-15 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSKIPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENP 105
+ D ++Y G RD A LKI Q Y E + +F V+ G +IP G+ LS+ D + EE+ + +R+ +G+LMW T TRPDIA+AVRAVAR+C +P
Sbjct: 326 LGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 423
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 6.750e-15 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSKIPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENP 105
+ D ++Y G RD A LKI Q Y E + +F V+ G +IP G+ LS+ D + EE+ + +R+ +G+LMW T TRPDIA+AVRAVAR+C +P
Sbjct: 847 LGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 944
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 6.790e-15 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 1 MDDAKYYIGSHITRDRKARELKIDQHLYVESMVEKFVVKKGSKIPAASGVPTLSKADEPRNPEEKEEMRKFTYRKAVGALMWTVTMTRPDIASAVRAVARFCENP 105
+ D ++Y G RD A LKI Q Y E + +F V+ G +IP G+ LS+ D + EE+ + +R+ +G+LMW T TRPDIA+AVRAVAR+C +P
Sbjct: 126 LGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig191459.5295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig191459.5295.1 ID=prot_H-elongata_contig191459.5295.1|Name=mRNA_H-elongata_contig191459.5295.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bpback to top |