prot_H-elongata_contig106491.529.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106491.529.1
Unique Nameprot_H-elongata_contig106491.529.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A6H5JEX1_9PHAE (Fumarate hydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX1_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 9.200e-41
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNR--AIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQ 85
            +VIQGKL+ HFPLVVFQTGSGTQTNMNCNEVISNR  AIE+LGGA GSKKPVHPNDHVNMGQSSNDSFPTAMHIAAI+Q
Sbjct:   35 EVIQGKLDDHFPLVVFQTGSGTQTNMNCNEVISNRHVAIEILGGAKGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAIMQ 113          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: D8LDX4_ECTSI (Fumarate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX4_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.160e-40
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQ 85
            +VI+GKL+ HFPLVVFQTGSGTQTNMNCNEVISNRAIE+LGG  GSKKPVHPNDHVNMGQSSNDSFPTAMHIAAI+Q
Sbjct:   96 EVIRGKLDDHFPLVVFQTGSGTQTNMNCNEVISNRAIEILGGVKGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAIMQ 172          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A257VVA6_9PROT (Fumarate hydratase (Fragment) n=1 Tax=Rhodospirillales bacterium 12-54-5 TaxID=1970562 RepID=A0A257VVA6_9PROT)

HSP 1 Score: 144 bits (362), Expect = 3.270e-40
Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    6 SVAQVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +  +V++GKL+GHFPLVV+QTGSGTQTNMN NEVISNRAIE+LGG MGSKKPVHPNDHVNMGQSSNDSFPTAMHIAA  +V
Sbjct:   88 AATEVMEGKLDGHFPLVVWQTGSGTQTNMNANEVISNRAIEILGGTMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAACEEV 168          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A482UFD1_9ARCH (Fumarate hydratase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UFD1_9ARCH)

HSP 1 Score: 141 bits (355), Expect = 4.460e-40
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +V++GKL+ HFPLVVFQTGSGTQTNMN NEV+SNR IEL+GG MGSKKPVHPNDHVNMG SSNDSFPTAMH+AA+L V
Sbjct:   31 EVMEGKLDEHFPLVVFQTGSGTQTNMNVNEVVSNRCIELMGGTMGSKKPVHPNDHVNMGMSSNDSFPTAMHVAAVLMV 108          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A397D1L0_9STRA (Lyase_1 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D1L0_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.180e-39
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0
Query:   10 VIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            VI GKL+ HFPLVVFQTGSGTQ+NMN NEVISNRAIE +GG +GSK PVHPNDHVNMGQSSNDSFPTAMHIAA+L++
Sbjct:  104 VIAGKLDDHFPLVVFQTGSGTQSNMNTNEVISNRAIEFMGGELGSKSPVHPNDHVNMGQSSNDSFPTAMHIAAVLEI 180          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A847GEX0_9BACT (Fumarate hydratase (Fragment) n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GEX0_9BACT)

HSP 1 Score: 138 bits (347), Expect = 2.440e-39
Identity = 63/78 (80.77%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +VI+G L+ HFPLV++QTGSGTQTNMN NEVISNRAIELLGG +GSKKPVHPNDHVNM QSSND+FPTAMHIAA+L +
Sbjct:   78 EVIEGALDDHFPLVIWQTGSGTQTNMNANEVISNRAIELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLMI 155          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A7S0Q6F2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6F2_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 4.480e-39
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +VI GKL  HFPLVV+QTGSGTQTNMN NEVI+NRAIE+LGG +GSKKPVHPNDHVN  QSSND+FPTAMHIAA+L V
Sbjct:   13 EVIAGKLMDHFPLVVWQTGSGTQTNMNVNEVIANRAIEMLGGELGSKKPVHPNDHVNKSQSSNDTFPTAMHIAAVLSV 90          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A212CR92_CEREH (Fumarate hydratase, mitochondrial n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A212CR92_CEREH)

HSP 1 Score: 136 bits (342), Expect = 1.510e-38
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +V +GKLN HFPLVV+QTGSGTQTNMN NEVISNRAIE+LGG +GSKKPVHPNDHVN  QSSND+FPTAMHIAA ++V
Sbjct:   90 EVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEILGGELGSKKPVHPNDHVNKSQSSNDTFPTAMHIAAAIEV 167          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: A0A7V8AAB3_9PROT (Fumarate hydratase n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A7V8AAB3_9PROT)

HSP 1 Score: 136 bits (343), Expect = 1.840e-38
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +VI+GKLN HFPLVV+QTGSGTQ+NMN NEVISNRAIE+LGG MGSKKP+HPNDHVNM QSSND+FPTAMHIA   +V
Sbjct:   78 EVIEGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGEMGSKKPIHPNDHVNMSQSSNDTFPTAMHIACAEEV 155          
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Match: UPI00138FD1F1 (fumarate hydratase class II-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FD1F1)

HSP 1 Score: 132 bits (333), Expect = 2.120e-38
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    9 QVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGGAMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV 86
            +VI GKL  HFPLVV+QTGSGTQ+NMN NEVISNRAIEL+GG MGSKKPVHPNDHVN  QSSND+FPTAMH+A  ++V
Sbjct:    6 EVISGKLKDHFPLVVWQTGSGTQSNMNVNEVISNRAIELMGGEMGSKKPVHPNDHVNKSQSSNDTFPTAMHVACAIEV 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106491.529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEX1_9PHAE9.200e-4189.87Fumarate hydratase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D8LDX4_ECTSI1.160e-4089.61Fumarate hydratase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A257VVA6_9PROT3.270e-4082.72Fumarate hydratase (Fragment) n=1 Tax=Rhodospirill... [more]
A0A482UFD1_9ARCH4.460e-4082.05Fumarate hydratase (Fragment) n=1 Tax=archaeon Tax... [more]
A0A397D1L0_9STRA1.180e-3983.12Lyase_1 domain-containing protein (Fragment) n=1 T... [more]
A0A847GEX0_9BACT2.440e-3980.77Fumarate hydratase (Fragment) n=1 Tax=Candidatus H... [more]
A0A7S0Q6F2_9EUKA4.480e-3980.77Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A212CR92_CEREH1.510e-3880.77Fumarate hydratase, mitochondrial n=2 Tax=Laurasia... [more]
A0A7V8AAB3_9PROT1.840e-3880.77Fumarate hydratase n=1 Tax=Hyphomonadaceae bacteri... [more]
UPI00138FD1F12.120e-3878.21fumarate hydratase class II-like n=1 Tax=Nematoste... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022761Fumarate lyase, N-terminalPFAMPF00206Lyase_1coord: 9..85
e-value: 9.3E-22
score: 77.8
IPR024083Fumarase/histidase, N-terminalGENE3D1.10.275.10coord: 4..68
e-value: 3.5E-28
score: 100.5
IPR005677Fumarate hydratase, class IIPANTHERPTHR11444ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASEcoord: 8..86
IPR008948L-Aspartase-likeSUPERFAMILY48557L-aspartase-likecoord: 7..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106491contigH-elongata_contig106491:160..1094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106491.529.1mRNA_H-elongata_contig106491.529.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106491 160..1094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106491.529.1 ID=prot_H-elongata_contig106491.529.1|Name=mRNA_H-elongata_contig106491.529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
DPWNPSVAQVIQGKLNGHFPLVVFQTGSGTQTNMNCNEVISNRAIELLGG
AMGSKKPVHPNDHVNMGQSSNDSFPTAMHIAAILQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022761Fumarate_lyase_N
IPR024083Fumarase/histidase_N
IPR005677Fum_hydII
IPR008948L-Aspartase-like