prot_H-elongata_contig19144.5294.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19144.5294.1
Unique Nameprot_H-elongata_contig19144.5294.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: D7FQT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT9_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.250e-95
Identity = 140/142 (98.59%), Postives = 140/142 (98.59%), Query Frame = 0
Query:    1 MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            MCYMCFDDVDE  NPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR
Sbjct:  409 MCYMCFDDVDEPGNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 550          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A835ZD25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD25_9STRA)

HSP 1 Score: 268 bits (686), Expect = 2.010e-86
Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0
Query:    1 MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            MCYMCFDD DE +NPLVAPC+CKGDTRYVHL CLQ+WHTTTSENKVCVVLNNKGVRVCTVCKSPYK SVRLP GESISLFQSPLPPPYICFMVVT+HQNNE+LFSTKYQLSF+SV+NR G  +++ LVVGRSRQCDMVLDYR
Sbjct:  178 MCYMCFDDEDEPANPLVAPCDCKGDTRYVHLGCLQRWHTTTSENKVCVVLNNKGVRVCTVCKSPYKPSVRLPTGESISLFQSPLPPPYICFMVVTKHQNNEDLFSTKYQLSFSSVVNRSGAGASRGLVVGRSRQCDMVLDYR 319          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A836C9Y1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y1_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.160e-85
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 0
Query:    1 MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            MCYMCFDD DEA NPLVAPC+CKGDTRYVHL CLQKWHTTT ENKVCVVLNNKGVRVCTVCKSPYKASVRLP G+S+SLF+SPLPPPYICFMVVT+HQNNE+LFSTKYQLSF+SV+NR GT S++ L++GRSRQCDMVLDYR
Sbjct:  303 MCYMCFDDEDEADNPLVAPCDCKGDTRYVHLGCLQKWHTTTLENKVCVVLNNKGVRVCTVCKSPYKASVRLPTGDSVSLFESPLPPPYICFMVVTKHQNNEDLFSTKYQLSFSSVVNRAGTGSSRGLIIGRSRQCDMVLDYR 444          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A6H5JTH3_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH3_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.130e-62
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
Query:   46 VCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            VCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR
Sbjct:    2 VCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 98          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A7S4DHT1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHT1_HETAK)

HSP 1 Score: 204 bits (518), Expect = 8.900e-60
Identity = 90/141 (63.83%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    2 CYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            CYMCFD  +E  NPLVAPCECKGDTRYVHL CLQ+WH +++ N+VCVV N  G  VC+VCK+PYK  V L  G +  L +  L PPYICF VVT+HQN+++LFSTKYQLSF++V+NR  T ST+ LV+GRS  CDM+LDYR
Sbjct:  234 CYMCFDGTEEDDNPLVAPCECKGDTRYVHLKCLQRWHVSSNGNQVCVVCNQNGAHVCSVCKAPYKTHVILKDGTTSDLLRPSLNPPYICFTVVTQHQNSDDLFSTKYQLSFDTVLNRSRTQSTRGLVIGRSHHCDMILDYR 374          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A836CMN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMN7_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.310e-53
Identity = 85/145 (58.62%), Postives = 110/145 (75.86%), Query Frame = 0
Query:    2 CYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVM-NRGG---TASTKELVVGRSRQCDMVLDYR 142
            CYMCFDD +E  NPLVAPCEC+G T+YVH++CLQ+WHT+   ++ C+V N KG +VC VCK+PYK  +RLP G+ I L +  L PP+I F V TRHQ+ EELFST++ LSF+S+M +RGG    AS + LV+GRS+  DMVLDYR
Sbjct:  276 CYMCFDDDEEGDNPLVAPCECRGSTKYVHVHCLQRWHTSKERHQPCIVSNKKGAQVCGVCKAPYKTHLRLPNGDFIPLLRPQLRPPFISFTVCTRHQHQEELFSTRFHLSFSSLMLSRGGGAAQASQRPLVIGRSQTSDMVLDYR 420          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A7R9U7Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z2_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.820e-48
Identity = 77/142 (54.23%), Postives = 99/142 (69.72%), Query Frame = 0
Query:    1 MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            +CY+CFD  +   NPLVAPC+C+GDT+Y+HLNCLQKW+ T  ++ VC V    G + C VCK+ YK   +L  G  ISL +  L PPYICF+VVT+H     LF T++QLSF SVM+  GT +T+EL +GRS  CDM LDYR
Sbjct:  230 ICYICFDGENTEDNPLVAPCQCRGDTQYLHLNCLQKWYETNEDSHVCAVYTTTGTQHCPVCKAKYKTHAKLQDGRIISLRRRELAPPYICFIVVTKHDAASVLFQTRFQLSFASVMSPDGTEATRELTIGRSHNCDMPLDYR 371          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: B8BYQ3_THAPS (Uncharacterized protein (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=B8BYQ3_THAPS)

HSP 1 Score: 155 bits (393), Expect = 1.490e-45
Identity = 66/141 (46.81%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    2 CYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            CYMCFD+ D A NP++ PC+C GDTRYVH++CL+KWHT  ++N+VC + +      C+VCKS +++  +L  G  + LF+S L PPY+  +V T+H+  + LF+T++QLSF++++   G   T+ L++GRS   DMVLDYR
Sbjct:    1 CYMCFDEEDTAENPMITPCKCLGDTRYVHVDCLRKWHTAEADNQVCFLSSVDAT--CSVCKSTFRSDFKLKDGRLVKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLLKPDGRNGTRPLLLGRSSGSDMVLDYR 139          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A7S3DUX3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DUX3_9STRA)

HSP 1 Score: 158 bits (400), Expect = 8.850e-45
Identity = 67/142 (47.18%), Postives = 100/142 (70.42%), Query Frame = 0
Query:    1 MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            +CYMCFD+ D   NP++ PC+C GDT+YVH+ CL+KWHT  ++N++C + +      C+VCKS +K+  +L  G  + LF+S L PPYI  +V T+H+  + LF+T++QLSFN++M   G  +T+ L++GRS   DMVLDYR
Sbjct:   30 VCYMCFDEEDTDENPMITPCKCAGDTKYVHVECLRKWHTAEADNQICFLSSVDAT--CSVCKSTFKSDFKLKDGRHVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFNTIMKPDGRNATRPLLLGRSSGSDMVLDYR 169          
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Match: A0A7R9Z764_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z764_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.520e-43
Identity = 67/142 (47.18%), Postives = 102/142 (71.83%), Query Frame = 0
Query:    1 MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR 142
            +CYMCFD+ D   NPL+ PC+C GDTRYVH+NCL+KWHT  ++N++C + +      C+VCKS +K+  +L  G ++ LF+S L PPY+  +V T+H+  + LF+T++QLSF++++   G  +T+ L++GRS   DMVLDYR
Sbjct:  219 VCYMCFDEEDTEENPLITPCKCLGDTRYVHVNCLRKWHTAEADNQICFLSSVDAT--CSVCKSTFKSDFKLKDGRTMKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLLKPDGRNATRPLLLGRSSGSDMVLDYR 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19144.5294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT9_ECTSI1.250e-9598.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZD25_9STRA2.010e-8686.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9Y1_9STRA1.160e-8585.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JTH3_9PHAE1.130e-62100.00FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S4DHT1_HETAK8.900e-6063.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMN7_9STRA6.310e-5358.62Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7R9U7Z2_9STRA1.820e-4854.23Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
B8BYQ3_THAPS1.490e-4546.81Uncharacterized protein (Fragment) n=3 Tax=Bacilla... [more]
A0A7S3DUX3_9STRA8.850e-4547.18Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7R9Z764_9STRA1.520e-4347.18Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 1..62
e-value: 5.0E-9
score: 46.0
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 2..48
e-value: 4.0E-12
score: 46.1
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 1..68
score: 16.836
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..74
e-value: 6.7E-15
score: 56.4
NoneNo IPR availablePANTHERPTHR46210FAMILY NOT NAMEDcoord: 1..142
NoneNo IPR availablePANTHERPTHR46210:SF2coord: 1..142
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19144contigH-elongata_contig19144:3056..4422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19144.5294.1mRNA_H-elongata_contig19144.5294.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19144 3029..4422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19144.5294.1 ID=prot_H-elongata_contig19144.5294.1|Name=mRNA_H-elongata_contig19144.5294.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
MCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVL
NNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNN
EELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD