prot_H-elongata_contig190867.5273.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig190867.5273.1
Unique Nameprot_H-elongata_contig190867.5273.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
BLAST of mRNA_H-elongata_contig190867.5273.1 vs. uniprot
Match: S8EP84_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EP84_9LAMI)

HSP 1 Score: 67.0 bits (162), Expect = 7.090e-13
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 SALPQIFLIERSTSIDFAEIQLSPTLIGLSPLNSSHPSILPHTRVRPSKEC 51
            SALP+   I RST IDFAE QL P L+GLSPL +SHP ILPHT VR SK C
Sbjct:   51 SALPRAIDIIRSTKIDFAENQLYPILVGLSPLATSHPRILPHTWVRSSKAC 101          
BLAST of mRNA_H-elongata_contig190867.5273.1 vs. uniprot
Match: A0A0B2R388_GLYSO (Putative mitochondrial protein n=1 Tax=Glycine soja TaxID=3848 RepID=A0A0B2R388_GLYSO)

HSP 1 Score: 64.3 bits (155), Expect = 2.110e-10
Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 SALPQIFLIERSTSIDFAEIQLSPTLIGLSPLNSSHPSILPHTRVRPSK 49
            SALP+   I RST IDFAE QL P L+GLSPL +SHP ILPHT VR SK
Sbjct:  283 SALPRAIDIMRSTEIDFAENQLYPILVGLSPLATSHPRILPHTWVRSSK 331          
BLAST of mRNA_H-elongata_contig190867.5273.1 vs. uniprot
Match: A0A4D6MF65_VIGUN (Uncharacterized protein n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6MF65_VIGUN)

HSP 1 Score: 51.2 bits (121), Expect = 8.690e-6
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 SALPQIFLIERSTSIDFAEIQLSPTLIGLSPLNSSHP---SILPH 42
            SALP+   I RST IDFAE QLSP L+GLSPL +SHP   S  PH
Sbjct:  263 SALPRAIDIIRSTEIDFAENQLSPILVGLSPLATSHPRFFSPFPH 307          
BLAST of mRNA_H-elongata_contig190867.5273.1 vs. uniprot
Match: A0A5A7TGB6_CUCME (Uncharacterized protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TGB6_CUCME)

HSP 1 Score: 48.9 bits (115), Expect = 5.780e-5
Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 SALPQIFLIERSTSIDFAEIQLSPTLIGLSPLNSSHP---SILPH 42
            SALP+   I RST IDFAE QL P L+GLSPL +SHP   S  PH
Sbjct:  358 SALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRFFSPFPH 402          
BLAST of mRNA_H-elongata_contig190867.5273.1 vs. uniprot
Match: A0A385G2C2_9FABA (Uncharacterized protein n=1 Tax=Ammopiptanthus mongolicus TaxID=126911 RepID=A0A385G2C2_9FABA)

HSP 1 Score: 48.9 bits (115), Expect = 5.880e-5
Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 SALPQIFLIERSTSIDFAEIQLSPTLIGLSPLNSSHP---SILPH 42
            SALP+   I RST IDFAE QL P L+GLSPL +SHP   S  PH
Sbjct:  556 SALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRFFSPFPH 600          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190867.5273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
S8EP84_9LAMI7.090e-1368.63Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A0B2R388_GLYSO2.110e-1069.39Putative mitochondrial protein n=1 Tax=Glycine soj... [more]
A0A4D6MF65_VIGUN8.690e-664.44Uncharacterized protein n=1 Tax=Vigna unguiculata ... [more]
A0A5A7TGB6_CUCME5.780e-562.22Uncharacterized protein n=1 Tax=Cucumis melo var. ... [more]
A0A385G2C2_9FABA5.880e-562.22Uncharacterized protein n=1 Tax=Ammopiptanthus mon... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190867contigH-elongata_contig190867:1..207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190867.5273.1mRNA_H-elongata_contig190867.5273.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig190867 1..207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig190867.5273.1 ID=prot_H-elongata_contig190867.5273.1|Name=mRNA_H-elongata_contig190867.5273.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
SALPQIFLIERSTSIDFAEIQLSPTLIGLSPLNSSHPSILPHTRVRPSKE
CCHYNISLLKFRSAGFGY*
back to top