prot_H-elongata_contig19081.5272.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19081.5272.1
Unique Nameprot_H-elongata_contig19081.5272.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length266
Homology
BLAST of mRNA_H-elongata_contig19081.5272.1 vs. uniprot
Match: D7FHB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB4_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 1.300e-131
Identity = 188/242 (77.69%), Postives = 211/242 (87.19%), Query Frame = 0
Query:    1 MTWITAHAPKPMENIWYESKELTIKLRGEAWQGGRGAFWPPFPTVESWFRIAGDIARQRDAPLLLSVLEFKRYALRIASASALMAYNPDDYRLLARSVYDLGVLARWTHGWSGRLSCYSSLWTPGNVGMALLGGLTLLAIRRNVASNDAVRCLLVGIASENIMARYMHDKVRAARTEELAKRYSRNQGKTCRGSGVKCVRLACEKLGLPRSSSQLDGAVAFAVGWAKEAVDGLPGNQKPRDG 242
            MTWITAH+PKPMENIWYESKEL + L   + Q  RGA WP FP +ESWFRIA DIARQRD+PLLLSV EFKR+ALRIAS+SAL+AYNP +Y  L  SVY+LG+LARWTHGWSGRLSCYS+LWTPGNVGMALLGGLTLL IR+NV + D+VRCLLVG+AS+ IM RY+ DKVRAART+ELA RYS N+GKTCRGSGVKCVR AC KLGLP S+SQLDGAVAFAVGWA EA++GLPGNQ PRDG
Sbjct:  145 MTWITAHSPKPMENIWYESKELMMTLHEISGQNARGAVWPSFPGIESWFRIAKDIARQRDSPLLLSVFEFKRFALRIASSSALLAYNPGEYDNLVTSVYNLGILARWTHGWSGRLSCYSALWTPGNVGMALLGGLTLLVIRKNVVT-DSVRCLLVGMASDTIMGRYLPDKVRAARTKELAYRYSNNKGKTCRGSGVKCVRKACVKLGLPPSASQLDGAVAFAVGWAMEAIEGLPGNQAPRDG 385          
BLAST of mRNA_H-elongata_contig19081.5272.1 vs. uniprot
Match: R7QMQ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMQ2_CHOCR)

HSP 1 Score: 175 bits (443), Expect = 1.410e-48
Identity = 99/266 (37.22%), Postives = 144/266 (54.14%), Query Frame = 0
Query:    5 TAHAPKPMENIWYESKELTIKLRGEAWQGGRGAFWPP--FPTVESWFRIAGDIARQRDAPLLLSVLEFKRYALRIASASALMAYNPDDYRLLARSVYDLGVLARWTHGWSGRLSCYSSLWTPGNVGMALLGGLTLLAIR--RNVASNDA-VRCLLVGIASENIMARYMHDKVRAARTEELAKRYSRNQGKTCRGSGVKCVRLACEKLGLPRSSSQLDGAVAFAVGWAKEAVDGLPGNQKPRDGNDHNQVEEIFCSSRAYRFTDERL 265
            T   P  M ++WY +         +A +  + + +    FP+  SW  IA D+      P+ LS      +A  +ASAS ++   P+ YR L   +Y+ G+ ARWT GWSG L+C++ LWT   + +A+L GL+LLA+   + V   D  VR +L G A+  +  R +  ++   R  EL +RY+   GKTCRGSGV   RLAC  L +P  +S +DG  AFA GWA E ++  PGNQKP  G  H+ VE    SS A+R+    +
Sbjct:  155 TRFPPNRMSSLWYTTARFEELYEEKAQEVRKMSEFRDVLFPSWTSWLNIAQDVGTHLSRPVYLSDSYLINFAGELASASLIVVRYPEKYRKLVDQIYEDGLDARWTFGWSGLLACFTQLWTKERIHIAMLNGLSLLALNSGQEVEHIDPNVRSMLYGYAAFAVSTRAVGKRIAEDRKVELLRRYTTESGKTCRGSGVCATRLACSILKIPAEASHMDGLPAFATGWASEYMEFKPGNQKPEHGESHDDVEMKHGSSNAWRYPHSHI 420          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19081.5272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHB4_ECTSI1.300e-13177.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
R7QMQ2_CHOCR1.410e-4837.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19081contigH-elongata_contig19081:3374..4171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19081.5272.1mRNA_H-elongata_contig19081.5272.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19081 3374..4171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19081.5272.1 ID=prot_H-elongata_contig19081.5272.1|Name=mRNA_H-elongata_contig19081.5272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
MTWITAHAPKPMENIWYESKELTIKLRGEAWQGGRGAFWPPFPTVESWFR
IAGDIARQRDAPLLLSVLEFKRYALRIASASALMAYNPDDYRLLARSVYD
LGVLARWTHGWSGRLSCYSSLWTPGNVGMALLGGLTLLAIRRNVASNDAV
RCLLVGIASENIMARYMHDKVRAARTEELAKRYSRNQGKTCRGSGVKCVR
LACEKLGLPRSSSQLDGAVAFAVGWAKEAVDGLPGNQKPRDGNDHNQVEE
IFCSSRAYRFTDERL*
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