prot_H-elongata_contig19066.5266.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 332 bits (851), Expect = 1.810e-109 Identity = 160/261 (61.30%), Postives = 200/261 (76.63%), Query Frame = 0
Query: 1 MSDMGDVSRTLGMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHY 261
M+D+G+ S LGM + RDRE T+TISQ+ Y + +++R+ M TP G E+S QPE+ LL+E+E R+Y+ I G++MY+AQV RYDI+Y QLAR M+KP+K HM AAKH LRYLAG+ DF ITYK+GGF++A FSD+NW NNPDN +STSS + MLANAP+SF+ LQGLTA S MEAELVA AL MKEAVFCSNM+ ELGF K F +P+Y DNT+ LH NR++S R KHIALR+FF+RELV EGKISIHY
Sbjct: 145 MTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHY 405
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 331 bits (848), Expect = 2.390e-106 Identity = 160/262 (61.07%), Postives = 201/262 (76.72%), Query Frame = 0
Query: 1 MSDMGDVSRTLGMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHYV 262
M+D+G+ S LGM + RDRE T+TISQ+ Y + +++R+ M TP G E+S QPE+ LL+E+E R+Y+ I G++MY+AQV RYDI+Y QLAR+M+KP+K HM AAKH LRYLAG+ DF ITYK+GGF++A FSD+NW NNPDN +STSS + MLANAP+SF+ LQGLTA S MEAELVA AL MKEAVFCSNM+ ELG K F +P+Y DNT+ LH NR++S R KHIALR+FF+RELV EGKISIHYV
Sbjct: 366 MTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYV 627
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 330 bits (847), Expect = 4.940e-103 Identity = 160/262 (61.07%), Postives = 200/262 (76.34%), Query Frame = 0
Query: 1 MSDMGDVSRTLGMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHYV 262
M+D+G+ S L M + RDRE T+TISQ+ Y + +++R+ M TP G E+S QPE+ LL+E+E R+Y+ I G++MY+AQV RYDI+Y QLAR M+KP+K HM AAKH LRYLAG+ DF ITYK+GGF++A FSD+NW NNPDN +STSS + MLANAP+SF+ LQGLTA S MEAELVA AL MKEAVFCSNM+ ELGF K F +P+Y DNT+ LH NR++S R KHIALR+FF+RELV EGKISIHYV
Sbjct: 705 MTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYV 966
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 324 bits (831), Expect = 3.110e-98 Identity = 157/262 (59.92%), Postives = 199/262 (75.95%), Query Frame = 0
Query: 1 MSDMGDVSRTLGMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHYV 262
M+D+G+ S LGM + RDRE T+TISQ+ Y + +++R+ + TP G E+S QPE+ LL+E+E R+Y+ I G++MY+AQV RYDI+Y QLAR M+KP+K HM AAKH LRYLAG+ DF ITYK+GGF++A FSD+NW NNPDN +STSS + +LANAP+SF+ LQGLTA S MEAELVA AL M EAVF SNM+ ELGF K F +P+Y DNT+ LH NR++S R KHIALR+FF+RELV EGKISIHYV
Sbjct: 1374 MTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYV 1635
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE) HSP 1 Score: 307 bits (787), Expect = 2.010e-96 Identity = 147/251 (58.57%), Postives = 190/251 (75.70%), Query Frame = 0
Query: 12 GMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHYV 262
GM + RDRE+GT++IS++ Y++ ++ R+ M +C TP +GP S QPEE LLN+EE RRY+ I G ++YL+Q+ RYDI+Y +QLAR M+KP+K HMGAAK RYLAG+ F I YK+GGF++ AF+D+NWGNNPDN +STSS + ML +AP++FK LQ LT QS ME ELVA AL +KEAVFCSN++ ELGF K VPLY DNT+ LH NR+YS KHIALR+FF+RELV EG+I+IHYV
Sbjct: 439 GMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYV 689
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.020e-87 Identity = 148/260 (56.92%), Postives = 179/260 (68.85%), Query Frame = 0
Query: 1 MSDMGDVSRTLGMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIH 260
MS +G+VS LGM VTRD E GT+TI+Q DYT ++ R+ M+ C P VG ELS QP E +LN+E+ T +QLAR MSK KAHMGAAKHLLR G+ DF ITYK+GGF++ AFSDANW +NPDN RSTSS ++M++ AP+SFK LQ LT S MEAEL+A ALTMKEAVFCSNM+ ELGF + FG VPLYI+NT+ LHV N+ YS R KHIAL +F VRELV+EG I+IH
Sbjct: 268 MSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEK------------------------TQSQLARVMSKAAKAHMGAAKHLLR---GTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 284 bits (726), Expect = 3.950e-87 Identity = 139/233 (59.66%), Postives = 178/233 (76.39%), Query Frame = 0
Query: 30 DYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHYV 262
+YT ++ R+ M SC T GPELS+ QPEE LLN E K+RY+AI G+VMYLAQVTRYDI+Y +Q ARAMS P+K HMGAAKHLLRYL+GS DF ITYK+GGF + A S+AN G+N DN +S SS I+M++ AP S K LQ LTA S +EAELVA AL MKE +FC+NM+ ELGF F S PL+ID+T+ L+V N+T+S KH+ALR+F++R++V+EG+ISIHY+
Sbjct: 515 NYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYI 747
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE) HSP 1 Score: 263 bits (673), Expect = 1.330e-84 Identity = 131/261 (50.19%), Postives = 183/261 (70.11%), Query Frame = 0
Query: 1 MSDMGDVSRTLGMNVTRDREKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHY 261
M+DMG+V R +G+ V RD E GT+ ISQ Y D++QRY M+ N TP G ELS QP+++LL EEK+R++ ITG+++YLAQ TRYD+ Y V+QL RA + P + HM AAKHLLRYL G+ D I YK+G FR++ F+D+++G NPDN RST+ + L IS+ + Q L AQ+ +EAEL A + + +EAV+ SN + E+GF K+F SVP+ D+T AL VA N +S R KHIALR+FF+REL + +I++H+
Sbjct: 6 MTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHH 265
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE) HSP 1 Score: 273 bits (699), Expect = 1.120e-81 Identity = 139/243 (57.20%), Postives = 174/243 (71.60%), Query Frame = 0
Query: 20 EKGTITISQKDYTEDVVQRYSMKSCNAAYTPRVGPELSLNQPEEKLLNEEEKRRYRAITGAVMYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHYV 262
E G +T SQ++Y ++ R+ M S T GPELS AI G+V+YLAQ+TRYDI+Y +QLARAMS P+K HMGAAKHLLRYL+GS DF ITYK+GGF + A SDANWGNNPDN +S SS I+M++ AP+SFK LQ LTA S +EAELVA AL MKE +FC+NM+ ELGF F S PLYI NT+ LHV N+T+S R KH+ALR+F++RE+V+EG+ISIHY+
Sbjct: 436 EDGELTNSQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYI 659
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE) HSP 1 Score: 251 bits (642), Expect = 5.900e-81 Identity = 121/180 (67.22%), Postives = 142/180 (78.89%), Query Frame = 0
Query: 82 MYLAQVTRYDILYTVNQLARAMSKPTKAHMGAAKHLLRYLAGSADFFITYKQGGFRVAAFSDANWGNNPDNDRSTSSCIVMLANAPISFKVRLQGLTAQSAMEAELVAEALTMKEAVFCSNMILELGFDKSFGSVPLYIDNTSALHVACNRTYSPRAKHIALRYFFVRELVEEGKISIHY 261
MY+AQV RYDI+Y LAR M+KP+K H AK LRYLAG+ DF ITYK+GGF++A FSD+NW NNPDN +STSS + MLANAP+SF+ LQGLTA S MEAELVA AL MKEAVFCSNM+ ELGF K F +P+Y DNT+ LH NR++S R KHIALR+FF+RELV EGKISIHY
Sbjct: 1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHY 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19066.5266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig19066.5266.1 ID=prot_H-elongata_contig19066.5266.1|Name=mRNA_H-elongata_contig19066.5266.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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