mRNA_H-elongata_contig19065.5264.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: D8LS83_ECTSI (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS83_ECTSI) HSP 1 Score: 207 bits (528), Expect = 4.790e-57 Identity = 98/163 (60.12%), Postives = 123/163 (75.46%), Query Frame = 1
Query: 7 FSFMLEKKRPDLVRKMVVIDVGGALQPKPLELLCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDA-WMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFL 492
FSF++EK RP+LV++MV IDVGGA++P L+ IMSYHLWLI AF +GGPIGD A+ FA LVGAP + VA A CYPYYH+WK+KL K + MP APLLF YGTAG K +PFHA WWA++V+ KEGS SV M +S HW+T D+PD++NR++D FL
Sbjct: 144 FSFLVEKNRPELVKRMVAIDVGGAVEPGLGSLIIIMSYHLWLIAAFRVGGPIGDVMARSFARLVGAPAGARVATARSCYPYYHYWKRKLDKSQGPMGNLMPGAPLLFAYGTAGYKRVMPFHADWWAKKVNDKEGSLSVAMTRSKHWVTVDQPDDLNRKLDAFL 306
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI) HSP 1 Score: 206 bits (523), Expect = 7.800e-57 Identity = 94/164 (57.32%), Postives = 122/164 (74.39%), Query Frame = 1
Query: 4 MFSFMLEKKRPDLVRKMVVIDVGGALQPKPLELLCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFLA 495
M+SF E KRPDLVRKMV IDVGGA++P + +++Y LWL AF+LG PIGD A+ FAWL+G+P + +A+AS CYPYYH WK L E+ MP+ PL+FL+GTAG K + FHAA WAE+V KEGS+S + ++SHW+TRD+P+EVNRR+DEFLA
Sbjct: 106 MYSFKFEAKRPDLVRKMVAIDVGGAMKPSICGAMLMVTYQLWLCAAFLLGRPIGDGIARSFAWLMGSPSGARIARASTCYPYYHTWKHILCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEKEGSSSQGIPQASHWVTRDQPEEVNRRLDEFLA 269
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.010e-42 Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 7 FSFMLEKKRPDLVRKMVVIDVGGALQPKP-LELLCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEP-DEVNRRIDEFLA 495
++FMLEK RPDLV+K+V +DVGG L P L LL I Y +L++AF++GG IGD A+ FA L GAP S VA+ASVCYPY H+WK ++ +MP+ P+LF+YG+AG K + FHA WW +++ +++GS+ V + ++SHW+ R D VN R+D F A
Sbjct: 104 YAFMLEKNRPDLVKKLVALDVGGGLSFWPSLSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFMPRCPVLFMYGSAGMKKLMRFHADWWVDKISKRKGSSVVEVTEASHWLMRGRGGDVVNARLDTFFA 268
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: A0A0Q7EQZ2_9BURK (Alpha/beta hydrolase n=1 Tax=Massilia sp. Root418 TaxID=1736532 RepID=A0A0Q7EQZ2_9BURK) HSP 1 Score: 93.6 bits (231), Expect = 2.310e-17 Identity = 55/171 (32.16%), Postives = 87/171 (50.88%), Query Frame = 1
Query: 1 SMFSFMLEKKRPDLVRKMVVIDVGGALQPK---PLEL---LCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFLA 495
S+F ++ P LV ++V +DVG AL P+ L L L I SY LWL +A+ +GG +GD ++ A + P+ + + + YPYY W MP P LF+YG P FH+ WA++++ GS ++ M+ + HW R++ E N + +LA
Sbjct: 103 SIFGTEFAQRHPQLVSRIVAVDVGDALTPEYRATLGLGAKLAIASYQLWLALAWRIGGKLGDGMSRRMAKAMRVPVEAADIGSQMNYPYYIAWTGAYGSYRHAATSMPGCPTLFIYGKRKP---FMFHSGAWADKLNATPGSRAIGME-TGHWPMREQAAEFNAAVQNWLA 269
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: A0A6I3SYR5_9BURK (Alpha/beta fold hydrolase n=2 Tax=Massilia buxea TaxID=1949069 RepID=A0A6I3SYR5_9BURK) HSP 1 Score: 89.0 bits (219), Expect = 8.970e-16 Identity = 53/169 (31.36%), Postives = 81/169 (47.93%), Query Frame = 1
Query: 4 MFSFMLEKKRPDLVRKMVVIDVGGALQPKPLE------LLCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFL 492
+F + ++ PDLV ++V +D+G A L L I++Y LWL A+ +GG IG++ A + P YPYY W K + P P+LF+YGT P FH++ WA E+D K GS +V M + HW + D N+ + ++L
Sbjct: 96 LFGYQFAQRHPDLVARIVGVDIGDAGSKDHLTDIGIKGKLGIVAYQLWLAAAWRIGGSIGESMTHSMARRMHVPAPPEALTVQKNYPYYSTWTGKYKSAR---TFRPACPMLFIYGTRKP---FMFHSSAWARELDSKPGSRAVAMD-TDHWPMLRQTDAFNQLVLDWL 257
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: UPI0018F2C28D (alpha/beta hydrolase n=1 Tax=Rugamonas sp. CCM 8940 TaxID=2765359 RepID=UPI0018F2C28D) HSP 1 Score: 87.0 bits (214), Expect = 4.420e-15 Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 7 FSFMLEKKRPDLVRKMVVIDVGGALQP---KPLEL---LCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFL 492
F + + P LV ++V +D+G A K L L L + Y L L A+ +GGPIGD +F ++ AP +++ +PYY W + + ++PK P+LF+YGT P FH+ W + + + S V +K +SHW+ ++P E N+ + +L
Sbjct: 102 FGYQFYMRHPQLVSRIVGVDIGDAQSRDHVKSLSLAAKLMVAWYQLTLAAAWKIGGPIGDGLTKFMLKVLRAPSPKQYISSAMNFPYYLVWTGGYGGKGDRTEFVPKCPMLFVYGTRKPFL---FHSTQWTDWLAARPLSQVVALK-TSHWVMLEQPQEFNQTVLAWL 265
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: A0A3N7HWS8_9BURK (Alpha/beta hydrolase n=1 Tax=Albitalea terrae TaxID=2496871 RepID=A0A3N7HWS8_9BURK) HSP 1 Score: 86.3 bits (212), Expect = 6.890e-15 Identity = 48/170 (28.24%), Postives = 83/170 (48.82%), Query Frame = 1
Query: 1 SMFSFMLEKKRPDLVRKMVVIDVGGALQPKPLELL------CIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMPKAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFL 492
++F + K P+LV K+V +D+G ++P L L I Y WL +A+ +GG +GD ++ + P +A + + YPYY W + A P P+LF+YG P FH+ WA+ + R + VP+ + HW+ ++P+ N + ++L
Sbjct: 101 AVFGYQFAMKHPELVSKIVGVDIGDTVEPAFLRSLSGSAKLAIFVYQSWLAVAWRIGGSLGDRMTRWMMRSLEVPSDPALAGSCMNYPYYIQWTRTHGSYANLSAVRPACPMLFIYGRRKPFL---FHSPAWAQMLARDPRNKVVPLD-TRHWVMVEQPEAFNAAVLDWL 266
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: A0A090TXW1_9VIBR (Epoxide hydrolase n=1 Tax=Vibrio maritimus TaxID=990268 RepID=A0A090TXW1_9VIBR) HSP 1 Score: 80.5 bits (197), Expect = 7.020e-13 Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = 1
Query: 7 FSFMLEKKRPDLVRKMVVIDVGGALQPKPLELLC-----IMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMP-KAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFLA 495
F + + P+ V ++V +D+G A K L ++ Y LWL++A+ LGG +GD + A + GAP ++ + + YPY+ W K E + + P LF+YG K + FH++ W ++ EG V + + HW+ ++P+E NR + ++LA
Sbjct: 98 FGYQYAMRHPEKVNRIVGVDIGDA-SSKDLVFSAKAKAILLGYQLWLMLAWNLGGKVGDWMTRKMATIFGAPGDTSRIHSGMNYPYHWRWSSVFMKRELGTKPLDIQVPFLFIYGK--DKVGM-FHSSPWQRKMADIEGKKVVGLS-THHWVMAEQPEEFNRIVGQWLA 261
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: A0A4U1BTJ1_9GAMM (Alpha/beta hydrolase n=1 Tax=Ferrimonas aestuarii TaxID=2569539 RepID=A0A4U1BTJ1_9GAMM) HSP 1 Score: 79.3 bits (194), Expect = 1.440e-12 Identity = 51/170 (30.00%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 1 SMFSFMLEKKRPDLVRKMVVIDVGGALQPKPLEL-----LCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMP-KAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFL 492
S++ + + D V+++V +D+G A K EL L I Y +WL A+ +GG +GD ++ A +V AP + + Y Y+ W + + + + + PLLF+YG A KA+ FH+ W +++ G+ V + HW+ RDEP++ NR + E+L
Sbjct: 96 SVWGYQYYLRNQDRVKRIVSVDIGDA-GSKHHELSTKAKLFIFGYQMWLATAWKIGGNLGDRMTRYMAGVVKAPGAPETIHSGMTYSYFWKWHSTFTGKPLNMLPLKVECPLLFIYG-ADKKAS--FHSEHWQQQMAEIPGNR-VEGLPTGHWVMRDEPEQFNRIVFEWL 260
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Match: A0A1J4QXA8_9VIBR (AB hydrolase-1 domain-containing protein n=5 Tax=Vibrio TaxID=662 RepID=A0A1J4QXA8_9VIBR) HSP 1 Score: 79.3 bits (194), Expect = 1.720e-12 Identity = 46/169 (27.22%), Postives = 88/169 (52.07%), Query Frame = 1
Query: 7 FSFMLEKKRPDLVRKMVVIDVGGALQPKPLEL-----LCIMSYHLWLIIAFVLGGPIGDNTAQFFAWLVGAPLRSNVAKASVCYPYYHWWKQKLSKEEEDDAWMP-KAPLLFLYGTAGPKAALPFHAAWWAEEVDRKEGSASVPMKKSSHWITRDEPDEVNRRIDEFLA 495
F + + + V +++ +D+G A K L+L + ++ Y LWL++A+ LGG +GD + A + GAP ++ + + YPY+ W + E + + P LF+YG K + FH+ W ++ EG+ V + + HW+ ++P+ NR ++++LA
Sbjct: 98 FGYQYAMRNLEKVERIIGVDIGDA-SSKDLQLSAKAKVILLGYQLWLMLAWNLGGKLGDWMTRKMAHVFGAPGEASRVHSGMNYPYHWRWSSAFMRRELGTIPLDIQVPFLFIYGRE--KVGM-FHSKSWQRKMANIEGNKVVGLS-THHWVMAEQPEAFNRIVEQWLA 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19065.5264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19065.5264.1 >prot_H-elongata_contig19065.5264.1 ID=prot_H-elongata_contig19065.5264.1|Name=mRNA_H-elongata_contig19065.5264.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp MFSFMLEKKRPDLVRKMVVIDVGGALQPKPLELLCIMSYHLWLIIAFVLGback to top mRNA from alignment at H-elongata_contig19065:350..3497+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19065.5264.1 ID=mRNA_H-elongata_contig19065.5264.1|Name=mRNA_H-elongata_contig19065.5264.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3148bp|location=Sequence derived from alignment at H-elongata_contig19065:350..3497+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19065:350..3497+ >mRNA_H-elongata_contig19065.5264.1 ID=mRNA_H-elongata_contig19065.5264.1|Name=mRNA_H-elongata_contig19065.5264.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1002bp|location=Sequence derived from alignment at H-elongata_contig19065:350..3497+ (Himanthalia elongata Himel1 dioecious)back to top |