mRNA_H-elongata_contig19057.5260.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19057.5260.1
Unique NamemRNA_H-elongata_contig19057.5260.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 587 bits (1513), Expect = 2.870e-195
Identity = 288/416 (69.23%), Postives = 341/416 (81.97%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNEDGTLKARKEPTPETSENGS-TGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAHDTI 1246
            + CF  NPGILMYG MCVVYTTG+WLLLAS+ ELPVSTTHSTVGGIVGMAM Y G+DCVVWYE+ D FP++ G+S IVASW +SP+ S V+++ LFL +RTFVLRS  AH R+  V+P LV ATI+VNVFFIVYKGA GL LDDT LSTAFAWA GLGGG  +  + TV+P+MR N+A KFNEDGTLK    P     E    +G+ G++   ++QD+H++VKDSEYVSQIH  AEKFDPRAEE FKY+QV TAICDSF HGANDVANAMGPFA IY +Y  GEV ++ +LG DAFWILA+GG+GIV GL  YGYKIIAAIGVKIAKITPSRGF+IELG+A+M+IIG+RL +PLSTTHCQVGAT  VAL+EG+GG+NG V+ K V GWIIT+VVC L+C++IFAQGAYAPY +DTI
Sbjct:   89 IECFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVNVFFIVYKGAKGLGLDDTSLSTAFAWALGLGGGIGLAMIPTVLPYMRRNIAAKFNEDGTLK----PVAAVEEKEKQSGMVGFVMNQMNQDIHSSVKDSEYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAGIYIVYTTGEVTTEGDLGNDAFWILALGGIGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIITIVVCALTCSVIFAQGAYAPYVYDTI 500          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 3.770e-192
Identity = 290/444 (65.32%), Postives = 344/444 (77.48%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVN----------------------------VFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNEDGTLKARKEPTPETSENGS-TGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAHDTI 1246
            + CFT NPGILMYG MCVVYTTG+WLLLASY ELPVSTTHST+GGIVGMAM Y G+DCVVWYE+ D FP++ GIS IVASWV+SPVLS V+++ LFL +RTFVLRS  +H R+  V+P LV ATI+VN                            VFFIVYKGA GL+LDDT LSTAFAWA GLGGG  +  + TV+P+MR N+A KFNEDGTLK    P     E    +G+ G++   ++QD+H++VKDS YVSQIH  AEKFDPRAEE FKY+QV TAICDSF HGANDVANAMGPFAAIY +Y  G V+S+ +LG DAFWILA+GG GIV GL  YGYKIIAAIGVKIAKITPSRGF+IELG+A+M+IIG+RL +PLSTTHCQVGAT  VAL+EG+GG+NG V+ K V GWI+T++VC L+C++IFAQGAYAPY +DTI
Sbjct:    5 IECFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVNGNKGLDPNNTTLPVAHTRPPVTSRPTVSVFFIVYKGAKGLDLDDTSLSTAFAWALGLGGGIGLAMIPTVLPYMRRNIAAKFNEDGTLK----PVAAVEEKEKQSGVVGFVMNQINQDIHSSVKDSGYVSQIHDNAEKFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFAAIYLVYSTGVVSSEGDLGDDAFWILALGGFGIVAGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMVIIGTRLEIPLSTTHCQVGATTGVALLEGAGGVNGTVLAKAVFGWIVTIIVCALTCSVIFAQGAYAPYVYDTI 444          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 575 bits (1483), Expect = 8.870e-191
Identity = 284/416 (68.27%), Postives = 339/416 (81.49%), Query Frame = 2
Query:    8 CFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNEDGTLKARKEPTPETSENGS-TGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAHDTISI 1252
            CF  NPGILMYG MCVVYTTG WLLLAS+ ELPVSTTHST+GGIVGMA+ Y G DCVVWYEK D FP++ GIS IVASWV+SPVLS V+++ LFL +RTFVLRS  +H R+  V+P LV ATI+VNVFFIVYKGA GL LDDT +  AFAWA GLGGG  +  + TV+P+MR N+A KFNEDGTLK    P     E    +G+ G++   L++D+H++VK+SEYVSQIH  AE+FDPRAEE FKY+QV TAICDSF HGANDVANAMGPFA+IY +Y  G V+S+ +LG +AFWILA+GG GIV GL  YGYKIIAAIGVKIAKITPSRGF+IELG+A+MIIIG+RL +PLSTTHCQVGAT  VAL+EG+GG+NG V+ K V GWIIT++VC L+C++IFAQGAYAPY +DTI +
Sbjct:   92 CFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVNVFFIVYKGAKGLGLDDTTIPVAFAWALGLGGGVGLAMIPTVLPYMRRNIAAKFNEDGTLK----PVAAVEEKEKQSGVVGFVINQLNKDVHSSVKESEYVSQIHDNAEQFDPRAEEAFKYVQVFTAICDSFSHGANDVANAMGPFASIYIVYTTGVVSSEGDLGDNAFWILALGGFGIVTGLAIYGYKIIAAIGVKIAKITPSRGFAIELGSAMMIIIGTRLEIPLSTTHCQVGATTGVALLEGTGGVNGTVLGKAVFGWIITIIVCALTCSVIFAQGAYAPYVYDTIDL 503          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 545 bits (1403), Expect = 1.090e-178
Identity = 261/415 (62.89%), Postives = 328/415 (79.04%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNEDGTLKARKEPTPETSENGSTGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAHDTI 1246
            V CF  NPGILMYG MCVVYT+G WLLLAS+ ELPVSTTH+TVGGIVGMAM Y G+DCVVWYE+ + FP++ G+S IVASW +SPVLS V+++ L+  +RTFVLR+  +  ++  ++P LV  TI+VNVFFI+YKGA  L L+ T L  AFAWAFGLGG        TV+P++R N+A K+++DGT K+             +G+ G++   ++QD++++VKDSEYV+QIH  AEKFDPR EEVFKY+Q+ TAICDSF HGANDVANAMGPFA+IY +Y  GEV  D  LG +AFWILA GGLG+V GL  YGY IIAAIGVKIAKITPSRGF+IELG+A+ +IIG+RL +PLSTTHCQVGATA VAL+EGSGG+NG+V+ K + GW++T+VVCGL+C+ +FAQGAYAPYA+D I
Sbjct:   97 VGCFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVNVFFILYKGAKSLGLERTTLPVAFAWAFGLGGVVGGAMYPTVLPYIRRNIAAKYHDDGTRKSEPRTEKVVRPQPQSGVIGFVMNQMNQDIYSSVKDSEYVNQIHDNAEKFDPRTEEVFKYVQIFTAICDSFSHGANDVANAMGPFASIYFVYTTGEVREDGNLGNNAFWILAFGGLGMVAGLALYGYNIIAAIGVKIAKITPSRGFAIELGSALTVIIGTRLEIPLSTTHCQVGATAGVALLEGSGGVNGIVLAKAIFGWVVTIVVCGLTCSALFAQGAYAPYAYDII 511          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 3.310e-165
Identity = 251/417 (60.19%), Postives = 310/417 (74.34%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNEDGTLKARKEPTPETSENGSTGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAHDTISI 1252
            + CFT NPGILMYG MCVVYT G+WLLLAS+ ELPVSTTHST+GGIVGM M Y G+DCVVWYE+ D FP++ G+  IV SW + PVLSGV++ +LF  VR  VLRS  A  RS  V+P+LV  TI++ VFF+VYKGA GL LD+  + TAFAW         +L + TV+ +MR+ +  KFNEDGTLK       +  E  + G+  ++   LDQD+HA VKD++YV  IH  AE+ DPR E+ FKY+QV TAICDSF HGANDVANAMGPFA+IY +Y  G V  +  LG D FWILA+GG GIV GL  YGYKII+AIGVKI K+TPSR FSI+LG+AIMIIIG+RL +P S THC+VGAT  VAL+EG  G+N  V+ KTV+GWI T +VCG++C+ +FAQGAYAPYA+DTI +
Sbjct:   90 IECFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAIEVFFLVYKGANGLSLDNPSVGTAFAWXXXXXXXXXLLMIPTVLSFMRSKIEAKFNEDGTLKP---VAVDVKEEATGGVARFVQLQLDQDVHATVKDNDYVDAIHENAERSDPRTEQAFKYVQVFTAICDSFSHGANDVANAMGPFASIYIVYTTGVVEEEKNLGNDMFWILALGGAGIVAGLTIYGYKIISAIGVKIPKVTPSRCFSIKLGSAIMIIIGTRLEIPFSPTHCKVGATTGVALLEGLDGINLNVVGKTVLGWITTSLVCGITCSGLFAQGAYAPYAYDTIDM 503          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 2.250e-158
Identity = 244/423 (57.68%), Postives = 313/423 (74.00%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNEDGTLKARKEPT-----PETSENG----STGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAHDT 1243
            V CF  NPGILMYGMMCVVYTTG+WLLLASYLELPVSTTHST+G I+GMA+AY GS CVVWY++ D FP+  G++ I  SWV+SP+ SGV SL++FL+VR FVLRS +A  RSFWV+P+LV+ TI+VNVF  VYKGA  + LD+T +  +  W  GLGG   ++   TV+P +R  V + +  DGT K   E       PE  E G     + +  ++++T ++++HA +   E V  IHS AE+FDPRAEEVFKY+QV +AICD+F HGANDVANAMGPF  I T+Y++G +    +LG   +  LA+GG GIV GL   G+KII AIGVKIAKITPSRGFSIE+GAA+++I G+RL +PLS+THCQVGAT+ VAL+EG  GLN  +++K + GW  T V+CG+SCAL+FAQGAYAP+A DT
Sbjct:   50 VECFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVLVMVTIAVNVFVFVYKGAKSMHLDETSVLISLGWGLGLGGSVPLVLAPTVIPALRRRVLKIYG-DGTRKVLPEGNIGACDPEDLEGGRSRSGSRVGTFINKTRERNIHAYLDTYEEVVAIHSSAEQFDPRAEEVFKYVQVTSAICDAFAHGANDVANAMGPFEIICTVYIDGGIRRGRDLGAPGYLTLALGGCGIVAGLALCGHKIITAIGVKIAKITPSRGFSIEIGAALVMITGTRLGVPLSSTHCQVGATSGVALLEGLDGLNTRMVLKIIAGWAATTVICGVSCALLFAQGAYAPFAFDT 471          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: A0A6S9IV20_HETAK (Phosphate transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 434 bits (1116), Expect = 1.760e-136
Identity = 219/425 (51.53%), Postives = 302/425 (71.06%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFN----------EDGTLKARKEPTPETSENGS------TGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAP 1228
            + CF  +  +LMYGM CV++ TGLWLLLA++L++PVSTTHS VGGI+GM +A  G  CVVW+   DTFP+V G+S IV SW +SP+ SGV +  LFL  RTF+LRS +++ R+ + YP+L+ +TI++  FF +YKGA+GL+LD+T LS A   +FG+G G A+L++   +P ++ ++  +            E+G  +  K+P      NGS        ++ +L+  ++ D+HAA+ D    + IH +AEKFD + EEVFK +QV TA CD+FGHGANDVAN++GP+AAIY IY +  V S  +LG DA+WIL +GGLGIV+GL TYGYKI+AAIGV+I++ITPSRGF IE+GA +++++GSRL MPLSTTHCQVGAT  VALVE  GGLN  ++     GW+ TLVV G + A++F QGAYAP
Sbjct:   88 IDCFMDDGPVLMYGMCCVIFCTGLWLLLATFLKMPVSTTHSVVGGIIGMTIAAKGGSCVVWHADTDTFPYVKGVSAIVVSWFLSPIFSGVGAAALFLFCRTFILRSENSYNRAIYFYPLLLGSTITLYTFFTIYKGASGLDLDETPLSLATGVSFGIGFGLALLSI-PCIPLLKKSIDARLERRAAAANAELEEGKEEFVKDPKA-AEVNGSFLSNSFNKMKNFLNEGINADVHAALDDDIIAADIHDKAEKFDEKTEEVFKALQVFTACCDAFGHGANDVANSIGPYAAIYIIYTDNAVVSSRDLGADAYWILFLGGLGIVLGLATYGYKIMAAIGVQISRITPSRGFCIEMGATVIVVMGSRLEMPLSTTHCQVGATMGVALVERVGGLNWKLLGTVAFGWVATLVVVGFTSAILFCQGAYAP 510          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: A0A6V1T0D7_HETAK (Phosphate transporter n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T0D7_HETAK)

HSP 1 Score: 432 bits (1110), Expect = 1.560e-135
Identity = 219/430 (50.93%), Postives = 303/430 (70.47%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFNED------GTLKARKEPTPE--TSE-----NGS------TGIRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYA 1234
            + CF  +  +LMYGMMCV++ TGLWLL+A++ ++PVSTTHS VGGI+GM +A  G  CVVW++  D FPFV G+S IV SW++SP+ SGV + IL+L VRTF+LRS +++TR+F  YP L+ + I++  FF +YKGA GL+LD+T LS A   +FG+G G  +L++   +P ++ ++  +          GT + ++ P  +  T +     NGS      +  + +L   ++ ++HA++ D    + IH  AEKF+ R EEVFK +QV TA CD+FGHGANDVAN++GP+AAIY IY + EV S  +LG DA+WIL +GGLGIV+GL TYGYKI++AIGV+I++ITPSRGF IE+GA ++I++GSRL MPLSTTHCQVGAT  VALVE  GGLN  ++ K   GW+ TL V G   A++F QGAYAP A
Sbjct:   88 IDCFIDDGPVLMYGMMCVIFCTGLWLLIATFFQMPVSTTHSVVGGIIGMTIAAKGGSCVVWHKDTDQFPFVKGVSAIVVSWILSPLFSGVGAAILYLFVRTFILRSENSYTRAFIFYPFLLASAITLYTFFTIYKGAKGLDLDETPLSVATGVSFGIGFGLGLLSI-PCMPMLKKSIEARLERRATAAAAGTEEGKEAPADDKVTDDKAALVNGSFLSRSFSKFKNFLDNGINNEVHASLDDDIVAAGIHDTAEKFEERTEEVFKALQVFTACCDAFGHGANDVANSIGPYAAIYIIYTDNEVVSSRDLGADAYWILFLGGLGIVLGLATYGYKIMSAIGVQISRITPSRGFCIEMGATVIIVMGSRLEMPLSTTHCQVGATMGVALVERVGGLNWKLLGKVAFGWVATLAVVGFFSAILFCQGAYAPCA 516          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: A0A7S0Z860_9CHLO (Phosphate transporter n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Z860_9CHLO)

HSP 1 Score: 431 bits (1108), Expect = 5.840e-135
Identity = 215/425 (50.59%), Postives = 293/425 (68.94%), Query Frame = 2
Query:    8 CFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTVFTVVPWMRANVARKFN-------EDGTLKARKEPTPETSENGSTGIRG-----------YLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAP 1228
            CF  +PG+LMYG +CV+++  +WL++AS+LE+PVSTTHS VGG++GM M   GS CVVW  K DTFP++ G++ IV SW++SP++SG  S + FL++R  V+RS +++ R+   +P+L+  T+ +N+FFIVYKGA  LELDDT LSTAFA AFG+G G  +L+ F VVP++       +        E GT K   E           G+ G           +L+ +L+    + V++   V  IH  AEKFD + E   +Y+Q+LTA CDSF HGANDVAN++GPFA++  I+  G+VN  +E+G+D++WIL +G  GIV+GL  YGYKI+ A+G KI K+TPSRG  IELGAA +II+GSRL  PLSTTHCQVGAT  VA +EGS G+N  +I KTVVGW+ITLV+ G S AL+FAQGA+AP
Sbjct:   98 CFNDDPGLLMYGCLCVIFSVAIWLVVASFLEMPVSTTHSCVGGMIGMTMVARGSSCVVWSAKSDTFPYIKGVAAIVVSWLLSPIVSGGFSFVFFLTLRALVMRSQNSYARARLAFPVLLACTLIINIFFIVYKGAKFLELDDTPLSTAFAAAFGVGCGAGVLSYFLVVPYILRTTDALYEQRQLEKAERGTKKVEVEEVVRQPRELPKGVFGAPKRVYYALVDHLTYSLEHKADSIVEEDAVVQAIHDNAEKFDEKTELSMRYLQILTACCDSFAHGANDVANSIGPFASMVVIFKTGKVNKKAEMGSDSYWILGLGAAGIVVGLALYGYKILHALGTKICKLTPSRGICIELGAACVIIMGSRLGWPLSTTHCQVGATVGVACLEGSKGINWFIIGKTVVGWMITLVIVGCSTALLFAQGAFAP 522          
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Match: A0A7S0QA31_9EUKA (Phosphate transporter n=3 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QA31_9EUKA)

HSP 1 Score: 430 bits (1105), Expect = 7.140e-135
Identity = 224/432 (51.85%), Postives = 295/432 (68.29%), Query Frame = 2
Query:    2 VSCFTSNPGILMYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVWYEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHTRSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGCAILTV--------------FTVVPWMRANVARKFNEDGTLKARK----EPTPETSENGSTG--IRGYLSRTLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHGANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMTYGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVGATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYAH 1237
            + CF   P +LMYG +CV+++ G WLLLASYLE+PVSTTHS VGG++GMAM   G  CV+W E  D FP+V G+S IV SW +SP+LS + ++ LFL VRT VLR+  ++ R+F VYP+LV  TI +N FFI+YKGA GL L+ T L  A   +  +    A+LT                T  P   A   ++    G +++ +    +  P  S     G  I   LS ++D D HA+++D+  V  +H+QAE FDP+AE VF+Y+Q+ TA CDSF HGANDVAN++GPFAAIY I+  GEV+S S++G   +WILA+GGLGI  GL+ YG KI+AA+GVKIAKITP+RGF+IELGAA++IIIGSRL  PLSTTHCQVGAT  VAL+EG GG+N  +++KT VGW+ITLVV G + AL+FA G + P  H
Sbjct:   79 IDCFVDEPAVLMYGCLCVIFSVGGWLLLASYLEMPVSTTHSCVGGMIGMAMVAHGPACVIWAEPTDQFPYVKGVSAIVISWFLSPLLSAISAMGLFLLVRTTVLRAKDSYDRAFKVYPLLVGVTIFINAFFIIYKGAKGLGLNKTPLEMALGISLAISAVSALLTTPLSRLIRASIDATHSTDAPAAAAAGVKELVTKGQMRSDELDVSKTMPPMSRLAEAGGQISRRLSTSIDVDPHASIQDNSVVGDMHAQAEVFDPKAEAVFRYLQIFTACCDSFAHGANDVANSIGPFAAIYAIHATGEVSSKSDMGVAGYWILALGGLGIATGLLLYGXKIMAALGVKIAKITPARGFAIELGAALIIIIGSRLGWPLSTTHCQVGATTGVALLEGKGGVNKYILVKTAVGWVITLVVVGCTAALLFAWGIHTPEQH 510          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19057.5260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNE7_9PHAE2.870e-19569.23Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNL8_9PHAE3.770e-19265.32Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G0K9_ECTSI8.870e-19168.27Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
D7FWT9_ECTSI1.090e-17862.89Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FZJ7_ECTSI3.310e-16560.19Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJQ6_ECTSI2.250e-15857.68Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
A0A6S9IV20_HETAK1.760e-13651.53Phosphate transporter n=3 Tax=Heterosigma akashiwo... [more]
A0A6V1T0D7_HETAK1.560e-13550.93Phosphate transporter n=2 Tax=Heterosigma akashiwo... [more]
A0A7S0Z860_9CHLO5.840e-13550.59Phosphate transporter n=3 Tax=Eukaryota TaxID=2759... [more]
A0A7S0QA31_9EUKA7.140e-13551.85Phosphate transporter n=3 Tax=Coccolithus braarudi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19057contigH-elongata_contig19057:1868..7142 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score559.3
Seed ortholog evalue1.5e-156
Seed eggNOG ortholog2880.D7G0K8
Preferred namePHO89
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Hectar predicted targeting categorysignal peptide
Exons7
Model size3612
Cds size1224
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930089.0384803-UTR-H-elongata_contig19057:1867..19011622930089.0384803-UTR-H-elongata_contig19057:1867..1901Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 1868..1901 +
1691679276.376259-UTR-H-elongata_contig19057:1867..19011691679276.376259-UTR-H-elongata_contig19057:1867..1901Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 1868..1901 +
1622930090.063593-UTR-H-elongata_contig19057:4543..47961622930090.063593-UTR-H-elongata_contig19057:4543..4796Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 4544..4796 +
1691679276.4432652-UTR-H-elongata_contig19057:4543..47961691679276.4432652-UTR-H-elongata_contig19057:4543..4796Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 4544..4796 +
1622930090.078204-UTR-H-elongata_contig19057:4907..61351622930090.078204-UTR-H-elongata_contig19057:4907..6135Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 4908..6135 +
1691679276.4531024-UTR-H-elongata_contig19057:4907..61351691679276.4531024-UTR-H-elongata_contig19057:4907..6135Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 4908..6135 +
1622930090.091939-UTR-H-elongata_contig19057:6269..71421622930090.091939-UTR-H-elongata_contig19057:6269..7142Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 6270..7142 +
1691679276.4631426-UTR-H-elongata_contig19057:6269..71421691679276.4631426-UTR-H-elongata_contig19057:6269..7142Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19057 6270..7142 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930089.055907-CDS-H-elongata_contig19057:1901..22531622930089.055907-CDS-H-elongata_contig19057:1901..2253Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 1902..2253 +
1691679276.3894284-CDS-H-elongata_contig19057:1901..22531691679276.3894284-CDS-H-elongata_contig19057:1901..2253Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 1902..2253 +
1622930089.077652-CDS-H-elongata_contig19057:2584..27691622930089.077652-CDS-H-elongata_contig19057:2584..2769Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 2585..2769 +
1691679276.4070718-CDS-H-elongata_contig19057:2584..27691691679276.4070718-CDS-H-elongata_contig19057:2584..2769Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 2585..2769 +
1622930089.095052-CDS-H-elongata_contig19057:3232..34091622930089.095052-CDS-H-elongata_contig19057:3232..3409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 3233..3409 +
1691679276.4159715-CDS-H-elongata_contig19057:3232..34091691679276.4159715-CDS-H-elongata_contig19057:3232..3409Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 3233..3409 +
1622930090.03816-CDS-H-elongata_contig19057:3571..39011622930090.03816-CDS-H-elongata_contig19057:3571..3901Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 3572..3901 +
1691679276.424539-CDS-H-elongata_contig19057:3571..39011691679276.424539-CDS-H-elongata_contig19057:3571..3901Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 3572..3901 +
1622930090.0535474-CDS-H-elongata_contig19057:4363..45431622930090.0535474-CDS-H-elongata_contig19057:4363..4543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 4364..4543 +
1691679276.4339192-CDS-H-elongata_contig19057:4363..45431691679276.4339192-CDS-H-elongata_contig19057:4363..4543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19057 4364..4543 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19057.5260.1prot_H-elongata_contig19057.5260.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19057 1902..4543 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19057.5260.1

>prot_H-elongata_contig19057.5260.1 ID=prot_H-elongata_contig19057.5260.1|Name=mRNA_H-elongata_contig19057.5260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=408bp
MYGMMCVVYTTGLWLLLASYLELPVSTTHSTVGGIVGMAMAYGGSDCVVW
YEKQDTFPFVDGISGIVASWVISPVLSGVLSLILFLSVRTFVLRSASAHT
RSFWVYPILVLATISVNVFFIVYKGATGLELDDTKLSTAFAWAFGLGGGC
AILTVFTVVPWMRANVARKFNEDGTLKARKEPTPETSENGSTGIRGYLSR
TLDQDLHAAVKDSEYVSQIHSQAEKFDPRAEEVFKYIQVLTAICDSFGHG
ANDVANAMGPFAAIYTIYVEGEVNSDSELGTDAFWILAIGGLGIVIGLMT
YGYKIIAAIGVKIAKITPSRGFSIELGAAIMIIIGSRLSMPLSTTHCQVG
ATAAVALVEGSGGLNGVVIMKTVVGWIITLVVCGLSCALIFAQGAYAPYA
HDTISID*
back to top

mRNA from alignment at H-elongata_contig19057:1868..7142+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19057.5260.1 ID=mRNA_H-elongata_contig19057.5260.1|Name=mRNA_H-elongata_contig19057.5260.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5275bp|location=Sequence derived from alignment at H-elongata_contig19057:1868..7142+ (Himanthalia elongata Himel1 dioecious)
GGTCAGCTGCTTCACCTCCAATCCGGGCATCCTCATGTACGGAATGATGT GCGTGGTCTACACGACTGGATTATGGCTTCTCCTCGCCTCCTACCTTGAG CTCCCGGTATCCACGACCCACTCGACCGTGGGCGGCATCGTCGGCATGGC CATGGCTTACGGCGGGTCCGACTGCGTCGTCTGGTATGAGAAGCAAGACA CGTTCCCATTCGTCGACGGTATCTCGGGTATCGTCGCGTCGTGGGTCATC TCTCCCGTGCTTTCGGGGGTTCTTTCCCTGATCCTCTTCTTGAGCGTGCG GACGTTCGTGCTTCGGTCTGCATCCGCGCACACGCGCTCCTTCTGGGTAT ATCCCATTCTCGTGCTAGCCACGATCTCGGTGAACGGTGAGGATCAATCT TATTTATTTACACCGTGGACATCGAAACGCGCGCGACCTGCTATCAAGTA TTGTAACGCAAATTCCTCGAAGCGCGTGGAATTGTCGAGGTCGAGAGGAC GTGTGTGTGCGTGTATTTATTAAATTGCGTGTATGTGTTTATTAAGACCC ATTAAAGTAGGCTCCCCCTTCGCTGAACGACGGCGTTGTTTTTGTATGAT TTAAGAGACGCATTGAAATAGTCGTCGACAAGTTGGTCTCCCCGTTGTCG ACGGGACCCCCCCCCCCCCACCCCCACCCTCGCTTCTCATCCGGCCATCC CGTGCGCGAACCTTCAGTATTCTTCATCGTGTACAAAGGCGCCACGGGAC TCGAACTGGACGACACGAAGCTAAGCACTGCTTTCGCTTGGGCGTTTGGT CTCGGAGGAGGTTGCGCGATACTGACGGTTTTCACGGTCGTCCCGTGGAT GAGGGCCAATGTCGCCAGGAAGTTCAACGAAGATGGCACGTTGAAAGCGA GGGTGAGCAAGCGCAGCCAAAGACACACACACAATGACGTCATTTCTGTC TCTTACACCGACTCAAGCGACGCAAATGCACAATGTAGTCGGCGACATTT CTGTCTCTTACACAATGTAGTCGGCGACGCAAATGCACCGCACTTTGATC GGCCCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCTCACTGTC TTAATCGCACGCAAAAGAAATTCTTTCCACTGCCCCCCATTCATGTATTA GATGGACCTTNNNNNNNNNNCACCCACACACCCCCCTCCCTCGCCCCCTG CTCCCCCCCCCCCCCCCCCACCGCCCTTTGATCGGCCCGATTTTTTTTTT TTTTTTTTCCGGCATGTCTGAACGCACCGACTCAAGCGCACGCAAGAGAG ATGCGTTCCACTGCCCACCATTCATGTATCAGATGGACCTGTGACGCTCA ATTCGTGCTTCGCAGAAGGAGCCCACTCCGGAGACGAGTGAGAACGGCTC CACGGGAATACGCGGCTACCTCAGCCGGACCCTCGACCAGGATCTACACG CCGCCGTCAAGGACTCGGAGTACGTCTCCCAGATCCACAGCCAGGCGGAG AAGTTCGACCCTCGCGCGGAAGAGGTCTTCAAATACATCCAGGTTCGTGA CACTGACGTTTGGGAGAGACGATATTTTCCCGATCAAGTACAATGCTCGG CGGGTATGGGGTGTTTCTTGCGGTATCCATAGCCGTAACTCTTAATCAAT CGCCTTTTCTTCTGCCATCTCTTGACCGCGAAAACCGTCCGACCCGCGCT CAAGGTACTCACCGCTATTTGCGATTCTTTCGGCCATGGTGCTAACGACG TCGCCAACGCCATGGGACCCTTTGCGGCGATCTACACCATCTACGTGGAG GGCGAGGTGAACTCTGATTCTGAGCTAGGCACAGACGCGTTCTGGATCCT CGCCATCGGAGGACTCGGCATCGTGATTGGGCTCATGACGTACGGCTACA AGATCATCGCGGCCATCGGCGTGAAGATCGCCAAGATCACCCCTTCGCGC GGATTTAGCATCGAGCTCGGCGCGGCCATCATGATCATCATAGGCTCCCG TTTATCGATGCCCCTTTCGACCACCCATTGCCAGGTGAGGGAGTGGTAAA CGCCGTGGCATATCTGAAACCCTTCTCACTTGAGGAAGCGTTAGAGGTCG GGTGATAATTTTTCTTTCCCCAACGAAAGTCTCCGCCCCCCCCCCCCCCC CCCACACCCCTCCTCCTCAGTTGTGCATAGATGTCAAATCAAAAGGATAG TGTAGATATAATGGTTTCGTGACCCCTCCTTACATGTGAAACCCGTTATC GCTGTTGAACCGAGTGGTTCGATTTCAGAAAAGTGTAAGCGGGTTTCCTC GACCAGCCGCGGTTGAGATATACGAAGTATCGTTGGGGGGGGGGGGGGAT GCTCCGCGACTGACGAGTAGCGAGATCAAGGGTCTTCGCGCGCGCTTGCC ACCCAGTGAATCGTAAGGCAGCACATAGCAGAAGAACATGGTGTTCGACA CGGCGACACCTTTGCCCTATCTCCCCGCCACCGTCATGACACGCAGGTGG GTGCAACCGCTGCCGTGGCGCTAGTGGAGGGTTCCGGTGGCCTGAACGGC GTGGTCATCATGAAGACCGTGGTGGGGTGGATCATTACCCTCGTCGTATG TGGGCTCTCCTGTGCGCTTATATTCGCTCAGGGGGCGTATGCTCCTTACG CGCACGACACCATTTCGATCGACTAGAGGATGCGGGGTAGGCGCCTGCCC GTCAGGGATCGACGGAATCCCTCAAGCGTCCCTCGGAATGTCCCACTCGC GCGTTACCTGCGTTGATTGGCCGATGCCGTCGACTCTTGTTGTGTGAGAT CCGTAAAACAAATCCGGGGCAACCGCACACGTGGCAAGTCTTTTTTTTGT ATTTTTTTTTTATATCGGGTGATTTTTTTTCTGCGCTTCCTGTTTTTACT TGAAAATGCAAGGAGTTGGGAGCAATTATCCCCCCCCCCCCCCTCCCCCC CCCTTTTTTGCCCACCCACTGTTTTTTTTGCGGCGTTTTTTTTTTTTTTN NNNNNNNNNCTCGAAATGCAAGGATTTGGCCGCAATTCCCCCCCCCCCCC CCCTCCCGCTCCATTATGCGCACACCAACGGCTACCGGCGCGCAGCTTCT TTACGTCTTAGGGTGACTCTTCGTGTCATTAACGATAAACAAATCACACC ACGGTGAGTGTCACACGCCCAACTTTATTTGTGGAGTAACGGTCTGGAAG GGGTGCGGGGTGCGGGGGGAAGAGTATATCGATGCATTCTCCTCAAGTTT TCAATTTAACCGCGCTATTCGGTGGCCCTGTCCTTCGGGAGGGAGCTGGT GACGCGGAACTACTCCCTCTTACGACGTTCGTCCGATTCCCTACGACTGC ATTTATTATTATTTTTTATGTACTTGTACAGTATTTATTTTCTATTTTTA GTCCTGCCGCTGCTGGTCAATTTTCAAGAAGGGAAGGGAGTGCTCAACTA TGCGTTACTCTTTTGAGTATTCGATTGACCTCTATTCCGTGGCTCTGTTC TGTCCTTTCCTCCGGGAGGGAGCGCGTGGTGCACGATGTTTCCTGCACGA GCCGCGCGGTCATCCGAAATTCTTCGCGGTATCGTGATATTTTACCTCTT GGGTGTACCTGGTTACAGCGCAAAAGCGTAGGCTTGAAGGTTTGTATAAT TGTGTGGACCAATCTGCGTGTCATACGATGTTAGAAATTCGCGCCGCGCG TCTTTTTTTTTCTGGCTAAAACCGCGGTTTCATGCCACGTACACTAGGTC GAAAAGACGAAACGCTTTCGCAATCGGTTTGATGAGAGCACTGTTTTCTG TTTTTGTCTTTTTTTAGACGGAAATTGTGACGATTTCGGTGTCGCCAAGG CCTTAAGCTTCTGAAGAACCTGATTGAGGCAGCAGTTCCTTATCATGGAG TTGGCGTTTTTTTTGTGTGACAGTAACGGCGCGCGGGACGTCGCCCCCCG TCAGGAGCATCCCTCCGGGGACTCGCCGATTGATCGCGCATCGCGGGATA TATTCCCTGGAGCTGTGTTTCGTTTTTCTCATTGTTCGGTTGCCGCCGCC GATGATCAAAATCATGGTTTTGTTATATTTTGGGGCGTGGCGTAGTTTAG CGTAGCATTGCGTGGCGAGTTACGAGCAAAACGCGAGTGATAAAGAGGCG CCTCGTCAAAAATTGTGCGCGAGTACAAGGATGTATTGGTTGTAGTAGAG CATCGTGTTGTATTTATGCGCGATATGCAACATATTATATCGCTCCAGTT TTATAGGTGACTCGGGGGGCGGGGGGTGGGGGGGGGGGCACACGACGACC GCCGAGTAGCGCTTTGGGTAGTAAGCGGTATGCTTTTANNNNNNNNNNGG CTGTATGTGGTCGTTGTTGGTGTGGGGGGTGTTGAAGGGGGGGGCGGGGG AGGGGTGGGGGGGGGGGGGGCACACGATGACCTACGATTAGCGATTAGGA TAGTAAGCGCTATGCTTTTAACGTGCATACCCCAAAAAATATAGGGGAGG CCGGCTGCCACATTGGGCTTTTTTCTGCTCGTGCTTTGTAGCATTCCTTT CTTATCCAGCAAAATCGGTAGGTCATCCGTACAGGGCTCCGGAGGCCTTT CGTACCAAATTCCTTTGAGATTTCCGTACCGCTATAATAATACTACATCT GCACTCTTTTGAGGCGCACCGGGTGTGGGGGGGGTTAGGGTTGCCAGACG CGGGGCTTGCCTTTCTCTCACGGGTGTGTATTGAAGACGTTCATAATATT CTGAATTATCATTTCGTTTGTAAATGTATATGTATATGCCTGAAACACGA CAAAGCCGAGTTTGGGCTTTAATTTCGAACTGCAACTGTCTACTGCAGAC TACTACTTTGGTCCGAAATATAAAGACCGTCTAGATATCAACATTTGTGC CTAAACGGTCCTTATATTTCGGACCAGAGTGGTATGACGTAAGCAGAATA TTTGTTTTGCCTAGAATGTTTTCAGCAGCGGCGGTATCGAAGATTGCCAC ATCAGGAGAGCCCGGGAATCGTACAGCAGTAGTAGTAGTTGCTGTTGCAT CTCAAGTATTGCTATTAATATATAATTTCTCTATTTTTTCACTGGCGATG CGTTTTATTTCTACTTCATCTCTCTTAAGGAATCTTGACTCATTCAAACC CTTCGACCATCCATATATTCTCTACCCTATGGATGCTGGTGATATACTCA CGGGATATATTATTATTAAAAAAACCTTAAACTCATTCGAACCCTCCGAA CATTTACACCTTCTTAGCGCCGTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig19057:1868..7142+

>mRNA_H-elongata_contig19057.5260.1 ID=mRNA_H-elongata_contig19057.5260.1|Name=mRNA_H-elongata_contig19057.5260.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2448bp|location=Sequence derived from alignment at H-elongata_contig19057:1868..7142+ (Himanthalia elongata Himel1 dioecious)
ATGTACGGAATGATGTGCGTGGTCTACACGACTGGATTATGGCTTCTCCT
CGCCTCCTACCTTGAGCTCCCGGTATCCACGACCCACTCGACCGTGGGCG
GCATCGTCGGCATGGCCATGGCTTACGGCGGGTCCGACTGCGTCGTCTGG
TATGAGAAGCAAGACACGTTCCCATTCGTCGACGGTATCTCGGGTATCGT
CGCGTCGTGGGTCATCTCTCCCGTGCTTTCGGGGGTTCTTTCCCTGATCC
TCTTCTTGAGCGTGCGGACGTTCGTGCTTCGGTCTGCATCCGCGCACACG
CGCTCCTTCTGGGTATATCCCATTCTCGTGCTAGCCACGATCTCGGTGAA
CGATGTACGGAATGATGTGCGTGGTCTACACGACTGGATTATGGCTTCTC
CTCGCCTCCTACCTTGAGCTCCCGGTATCCACGACCCACTCGACCGTGGG
CGGCATCGTCGGCATGGCCATGGCTTACGGCGGGTCCGACTGCGTCGTCT
GGTATGAGAAGCAAGACACGTTCCCATTCGTCGACGGTATCTCGGGTATC
GTCGCGTCGTGGGTCATCTCTCCCGTGCTTTCGGGGGTTCTTTCCCTGAT
CCTCTTCTTGAGCGTGCGGACGTTCGTGCTTCGGTCTGCATCCGCGCACA
CGCGCTCCTTCTGGGTATATCCCATTCTCGTGCTAGCCACGATCTCGGTG
AACGTATTCTTCATCGTGTACAAAGGCGCCACGGGACTCGAACTGGACGA
CACGAAGCTAAGCACTGCTTTCGCTTGGGCGTTTGGTCTCGGAGGAGGTT
GCGCGATACTGACGGTTTTCACGGTCGTCCCGTGGATGAGGGCCAATGTC
GCCAGGAAGTTCAACGAAGATGGCACGTTGAAAGCGAGGTATTCTTCATC
GTGTACAAAGGCGCCACGGGACTCGAACTGGACGACACGAAGCTAAGCAC
TGCTTTCGCTTGGGCGTTTGGTCTCGGAGGAGGTTGCGCGATACTGACGG
TTTTCACGGTCGTCCCGTGGATGAGGGCCAATGTCGCCAGGAAGTTCAAC
GAAGATGGCACGTTGAAAGCGAGGAAGGAGCCCACTCCGGAGACGAGTGA
GAACGGCTCCACGGGAATACGCGGCTACCTCAGCCGGACCCTCGACCAGG
ATCTACACGCCGCCGTCAAGGACTCGGAGTACGTCTCCCAGATCCACAGC
CAGGCGGAGAAGTTCGACCCTCGCGCGGAAGAGGTCTTCAAATACATCCA
GAAGGAGCCCACTCCGGAGACGAGTGAGAACGGCTCCACGGGAATACGCG
GCTACCTCAGCCGGACCCTCGACCAGGATCTACACGCCGCCGTCAAGGAC
TCGGAGTACGTCTCCCAGATCCACAGCCAGGCGGAGAAGTTCGACCCTCG
CGCGGAAGAGGTCTTCAAATACATCCAGGTACTCACCGCTATTTGCGATT
CTTTCGGCCATGGTGCTAACGACGTCGCCAACGCCATGGGACCCTTTGCG
GCGATCTACACCATCTACGTGGAGGGCGAGGTGAACTCTGATTCTGAGCT
AGGCACAGACGCGTTCTGGATCCTCGCCATCGGAGGACTCGGCATCGTGA
TTGGGCTCATGACGTACGGCTACAAGATCATCGCGGCCATCGGCGTGAAG
ATCGCCAAGATCACCCCTTCGCGCGGATTTAGCATCGAGCTCGGCGCGGC
CATCATGATCATCATAGGCTCCCGTTTATCGATGCCCCTTTCGACCACCC
ATTGCCAGGTACTCACCGCTATTTGCGATTCTTTCGGCCATGGTGCTAAC
GACGTCGCCAACGCCATGGGACCCTTTGCGGCGATCTACACCATCTACGT
GGAGGGCGAGGTGAACTCTGATTCTGAGCTAGGCACAGACGCGTTCTGGA
TCCTCGCCATCGGAGGACTCGGCATCGTGATTGGGCTCATGACGTACGGC
TACAAGATCATCGCGGCCATCGGCGTGAAGATCGCCAAGATCACCCCTTC
GCGCGGATTTAGCATCGAGCTCGGCGCGGCCATCATGATCATCATAGGCT
CCCGTTTATCGATGCCCCTTTCGACCACCCATTGCCAGGTGGGTGCAACC
GCTGCCGTGGCGCTAGTGGAGGGTTCCGGTGGCCTGAACGGCGTGGTCAT
CATGAAGACCGTGGTGGGGTGGATCATTACCCTCGTCGTATGTGGGCTCT
CCTGTGCGCTTATATTCGCTCAGGGGGCGTATGCTCCTTACGCGCACGAC
ACCATTTCGATCGACTAGGTGGGTGCAACCGCTGCCGTGGCGCTAGTGGA
GGGTTCCGGTGGCCTGAACGGCGTGGTCATCATGAAGACCGTGGTGGGGT
GGATCATTACCCTCGTCGTATGTGGGCTCTCCTGTGCGCTTATATTCGCT
CAGGGGGCGTATGCTCCTTACGCGCACGACACCATTTCGATCGACTAG
back to top