mRNA_H-elongata_contig19049.5256.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S2SK93_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK93_9STRA) HSP 1 Score: 296 bits (759), Expect = 6.890e-91 Identity = 177/335 (52.84%), Postives = 204/335 (60.90%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLAC---TCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEA-KAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCSP 1029
YMGF GV+GHEFVG+ E D L GKRVVG+INLAC C CG GG RARNHCPNRTVLGIL K GTYA+YLTLP NLHVVP++VS A+A F EPLAAACRI+EQGL P + AVLGDGKLGLLIAEV+ R T E C T L GRH EKM L A + S A+ + G +DVV+DATGSPQGL A +LCR +GT+VLKSTCA GT FN AP VI+E RV+GSRCGPF AL LL SG +D+ + I+ FP E + AL A +KG LKVQ+ P
Sbjct: 62 YMGFAGVLGHEFVGLCETAP------PDAQDLVGKRVVGDINLACGKVATCHTCGCGGVRARNHCPNRTVLGILNKDGTYAQYLTLPVTNLHVVPESVSTANAAFVEPLAAACRIVEQGLIDPTTDRVAVLGDGKLGLLIAEVVGRHVHGGASST----------EEPSSPC--------------TVLFGRHPEKMALVSQEAHVA-------VHSSEDALPTHGGQYDVVIDATGSPQGLDLAQKLCRPLGTLVLKSTCAAGTDFNTAPFVIDELRVIGSRCGPFPEALALLESG-LDLTKLITASFPFEQVDEALRKAASKGCLKVQLSFPP 358
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S1AD40_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AD40_NOCSC) HSP 1 Score: 277 bits (708), Expect = 2.100e-83 Identity = 159/330 (48.18%), Postives = 200/330 (60.61%), Query Frame = 1
Query: 43 GFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCSPS 1032
GF G++GHEFVG V S + GKRV GE+N++C C +C GG ARNHC R+VLGIL GTYAE+LTLP NLHVVPD +S+ +AVF EPLAAA R++EQGL PE + V GDGKLGLL+AEVLAR+ + P L+GRH +KM L +A E S VA LAGSFDVVV+ATG+P GL +A L MGTVVLKSTCA+ + +P+V+ E +VVGSRCGPF A+ LL+SG +DV++Y+S VFPLE+ + ALE A +G LKVQ+ + S
Sbjct: 60 GFTGILGHEFVGEVVVA-------SSAPEIVGKRVCGELNVSCNSCGICSRGGSLARNHCLRRSVLGILNHDGTYAEFLTLPVSNLHVVPDGISNEAAVFVEPLAAAFRVVEQGLVQPEHRVCVQGDGKLGLLVAEVLARQGLSPKP----------------------------------VLLGRHADKMALLGDLVQAREASSPE---ESDSLVAELAGSFDVVVEATGTPLGLTSAASLVLPMGTVVLKSTCASPATIDTSPLVVRELKVVGSRCGPFPEAVTLLNSGDLDVQKYVSAVFPLENADKALEMAGTRGCLKVQLAVASS 345
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A0M0JNU1_9EUKA (L-threonine 3-dehydrogenase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNU1_9EUKA) HSP 1 Score: 275 bits (704), Expect = 5.610e-83 Identity = 170/331 (51.36%), Postives = 200/331 (60.42%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLAC---TCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRK-SASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQI 1017
YMGF GVVGHEFVG+VE AL GKRVVG+INL C C C G DRARNHCP RTVLGIL K GTY E +TLP +NLHVVPD+VS +A FAEPLAAA RI+EQ L P K AV+GDGKLG+LIAEVL R + +A P+ +GRH EKM L S A E +ASD + S A SFDVVVDATGSP GL A LCR +GT+VLKSTCA G FN AP V++E +++GSRCGPF AL+LL+SG +D+ I+ FPL + A+ A KG +KVQI
Sbjct: 49 YMGFAGVVGHEFVGIVESAPA------GYEALHGKRVVGDINLVCGNVESCFTCACGWDRARNHCPVRTVLGILNKDGTYQERITLPAKNLHVVPDHVSSENAAFAEPLAAAFRIVEQKLVAPTDKVAVVGDGKLGVLIAEVLGRAQVAAGGPRVV--------------------------------FVGRHPEKMALV-SAAAAVEP-----VASD-GVLPSGASSFDVVVDATGSPAGLDLARALCRPLGTLVLKSTCAAGANFNTAPFVVDELKIIGSRCGPFPPALELLASG-LDLTPLITATFPLTEASAAVAKAATKGTMKVQI 333
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S0Q5J9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5J9_9EUKA) HSP 1 Score: 275 bits (703), Expect = 1.220e-82 Identity = 169/333 (50.75%), Postives = 205/333 (61.56%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACT---CCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCS 1026
YMGF+G+VGHEFVG+ E G H L GKRVVGEINLAC C+ C GG RARNHCP RTVLGIL K GTYA+YLTLP +NLHVVPD+V+ +A FAEPLAAA RI+EQGL + AV+GDGKLGLLI+EVL R +A+ GG L GRH KM L S G +T L+ +A+ A +FD+VVDATGSP GL + E+CR MGTVVLKSTCA FN AP VI+E RV+GSRCGPF+ AL LL+ G +D+ ++ FPL + A+ A KG +K+Q+V S
Sbjct: 70 YMGFSGIVGHEFVGICETAPA-GHTH-----LIGKRVVGEINLACADLATCSTCACGGARARNHCPTRTVLGILRKDGTYAQYLTLPARNLHVVPDSVTTENAAFAEPLAAAFRIVEQGLVRATDRVAVIGDGKLGLLISEVLGRHAAAA------------------------GGP-------RPVLFGRHDSKMRLLSS-GANVDTELSV------NALPENAAAFDLVVDATGSPAGLDLSREICRPMGTVVLKSTCAASKDFNTAPFVIDELRVMGSRCGPFKPALQLLAEG-LDLTPLVTKRFPLSEATDAIREAGKKGCMKIQLVIS 357
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S4EC03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EC03_9STRA) HSP 1 Score: 274 bits (700), Expect = 3.070e-82 Identity = 167/328 (50.91%), Postives = 199/328 (60.67%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARR-KSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQI 1017
YMGF GVVGHEFVG+ C HS H L GKRVVGEINLAC C +C GG RARNHCP RTVLGIL K+GTY E LTLP +NLHVVPD V +A FAEPLAAA R++EQ L P + K A++GDGKLGLLI EVL R + +P+ L GRH KM L S + +T L SD +A+ A ++DVVVDATGSP GL + +LCR+ GT+VLKSTCA GT FN AP V++E RV GSRCGPF AL+LL + +D+ I FPL A++ A +G LKVQI
Sbjct: 70 YMGFEGVVGHEFVGL-----CESAPHSHQH-LVGKRVVGEINLACNTCMLCERGGPRARNHCPKRTVLGILNKNGTYQERLTLPARNLHVVPDCVKTENAAFAEPLAAAFRVVEQNLVPAKTKIAIVGDGKLGLLIGEVLGRHAQRTGSPRPV--------------------------------LYGRHVSKMKLLSSESQ-CDTAL-----SD-TALPKNAYAYDVVVDATGSPAGLDLSRQLCRTEGTLVLKSTCAAGTDFNTAPFVVDELRVQGSRCGPFGPALELLKT--LDLTPLIDSTFPLAKAPEAVKRAGERGCLKVQI 350
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: UPI00109BE96A (uncharacterized protein LOC110253280 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE96A) HSP 1 Score: 268 bits (684), Expect = 5.550e-80 Identity = 154/333 (46.25%), Postives = 204/333 (61.26%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDR----ARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGT-GFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIV 1020
YMGF GV+GHEFVGVVE+V + +RVVGEINLAC C VC DR RNHCPNRTVLGIL K G YA+Y+TLP +NL VPD+V+D A F EPLAAACRI+EQ L P + A++GDGKLGLLI EVLA QDC + L GRH+EK++L + + T+ + D + + + +FDV V+A+GSPQGL+ A E+ RS+GT+VLK+TCA GT G N AP V+ E +++GSRCGPF+AA+D+L G ++V++ ++ +P A+E AK KG LK+Q++
Sbjct: 64 YMGFTGVIGHEFVGVVEKVSA-----NSXGIKXNQRVVGEINLACLSCDVCE---DRQSILCRNHCPNRTVLGILHKDGCYADYITLPVRNLLPVPDSVTDQQACFIEPLAAACRIVEQKLVQPRQRVAIIGDGKLGLLITEVLAA-----------------------QDCSE------------VVLFGRHEEKLSLV------PKNVTTQLVPKDET-MPEFSDTFDVCVEASGSPQGLILAGEITRSLGTIVLKTTCAVGTSGLNMAPFVVKELKIIGSRCGPFQAAIDVLKGGHVNVDKLLTKAYPFSQCFEAIEHAKKKGTLKIQLI 346
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A1E7FAK7_9STRA (GroES-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAK7_9STRA) HSP 1 Score: 268 bits (684), Expect = 9.650e-80 Identity = 176/374 (47.06%), Postives = 214/374 (57.22%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALT----GKRVVGEINLACTCCTVC-------GVGGD---RARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLA---PPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAV----ASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLS---------SGG------------IDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCSPS 1032
YMGF GV+GHEFVGVVEE+ ++DD ++ KRV G+IN+ C+ C VC V G+ +RNHCP R+VLGIL ++GT AEYLTLP NLH VP +VSD AVFAEPLAAACRI+EQGL PP+ K A+LGDGKLGL+IAEVL R S R C K + L G+HK K++L R A + D A A AG FDVVVDATGSP GL A LCR MGT+VLKSTCA G FN AP VI+E RVVGSRCGP + ALDLL+ SG ++V +YI+ FPL + A++ A K +KVQI+C+ S
Sbjct: 29 YMGFTGVLGHEFVGVVEEI------NTDDESIKEKWLNKRVCGDINVGCSSCNVCLNFPHDRNVKGNCPMMSRNHCPTRSVLGILNRNGTIAEYLTLPVSNLHEVPSHVSDEVAVFAEPLAAACRIVEQGLVRVIPPD-KVAILGDGKLGLMIAEVLGREHST------------------RLGCSK---------YPKPILFGKHKHKLDLV--RESAGVDCRSVSDCKDEKAFNGVSAEYAGQFDVVVDATGSPAGLSLASGLCRPMGTLVLKSTCAAGEKFNAAPFVIDELRVVGSRCGPIDKALDLLAITNDNKIDGSGNDSSNNKKANIRPLNVVKYITRTFPLSEAVAAIKCAAEKSTMKVQIICNES 366
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S1Y2C0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2C0_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.090e-79 Identity = 166/352 (47.16%), Postives = 215/352 (61.08%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDR-----ARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEA--KAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIAS--DRSA----VASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLS----SGGID---VERYISGVFPLEDTEVALEAAKAKGALKVQIVCSPS 1032
YMGF G++GHEFVG V ++R G+ S KRV G+IN+ C C VC D +RNHCPNRTVLGIL ++GT AEYLTLP QNLH+VPD++SD AVF+EPLAAACRI+EQGL E+ K A+LGDGKLGL+IAEV+ R + S T + E + L G+H K+ L + G ++T+ ++ D SA A+ A ++DVVVDATG+P L+ A LCR MGTVVLKSTCA G FN AP VI+E RV+GSRCGP + AL+LL+ GI V++Y++ FPL + A+E A + +KVQI+CS S
Sbjct: 85 YMGFQGILGHEFVGKVVDIRT--GDDSLKTKYMNKRVCGDINVGCFSCRVCQGSRDSCCSQMSRNHCPNRTVLGILNRNGTMAEYLTLPVQNLHLVPDHISDEDAVFSEPLAAACRIVEQGLVSIESSDKVAILGDGKLGLMIAEVMGR-EYLSVKGTAEAPEPPI-------------------------LFGKHDHKLKLVENSG-----VITKMVSDCQDDSAFNGVAAAHAAAYDVVVDATGNPAALLLAAGLCRPMGTVVLKSTCAAGEQFNAAPFVIDELRVIGSRCGPIDKALELLALQEDDAGIPSLRVQKYVTKTFPLSQAKEAVECAAKRETMKVQIICSTS 403
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S2KFL9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFL9_9STRA) HSP 1 Score: 268 bits (685), Expect = 4.710e-79 Identity = 162/353 (45.89%), Postives = 200/353 (56.66%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAP-PEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSG----------------------GIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCS 1026
YMGF G++GHEFVG+V V + D GKRV G+IN+ C C +C +G DR+RNHCPNRTVLGIL K GT AEYLTLP NLH VP+NVSD AVFAEPLAAACRI+EQ + E + A+LGDGKLGL+IAEVL R + + D K GI E K L+G+H KM L G ++ + + FDVV+DATG+ GL + L R MGT+VLKSTCA+G FN AP VI+E +VVGSRCGPF AL LLS G++ +YI+ +PL E AL A + +KVQI+CS
Sbjct: 87 YMGFQGILGHEFVGIVHSVNASAAQR-DAWTWIGKRVCGDINICCQSCDICSLGTDRSRNHCPNRTVLGILNKDGTMAEYLTLPINNLHEVPENVSDGDAVFAEPLAAACRIVEQNVINFDEDRVAILGDGKLGLMIAEVLGRE-----------------FLKVQDDAEKSEGI-EGKSIPKPLLLGKHANKMKLVEESGAQCRN-ISDCKDEEGNIRPEYTQQFDVVIDATGNSAGLAISTSLTRPMGTIVLKSTCASGDLFNAAPFVIDELKVVGSRCGPFPKALQLLSISDDSDETNGDGSAGCCKASSCMKGLNATKYITRYYPLSQAEEALAFAAERSTMKVQIICS 419
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A1Z5KM79_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM79_FISSO) HSP 1 Score: 261 bits (666), Expect = 4.590e-77 Identity = 168/354 (47.46%), Postives = 211/354 (59.60%), Query Frame = 1
Query: 37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDR-----ARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLA----PPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFI--ASDRSAVASL----AGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTG--FNPAPVVINEQRVVGSRCGPFEAALDLLS-------SGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCS 1026
YMGF GV+GHEFVG+VEEV S D GKRV G+IN+ C C VC D +RNHCPNR+VLGILG++G+ AEYLTLP +NLH VPD++ D AVF+EPLAAACRI+EQGL PP+ K A+LGDGKLGL+IAEVL R + E VG +D + L G+H+ K+ L G ++T+ I D SA + AG FDVVVDATGSP L + LCR MGT+VLKSTCA+ FN AP VI+E +VVGSRCGP + AL LL+ ++V +YI+ FPL + A+ A AK +KVQI+C+
Sbjct: 53 YMGFTGVLGHEFVGIVEEVH-----DSKDADWIGKRVCGDINVGCAACGVCDKQYDHRCSQMSRNHCPNRSVLGILGRNGSMAEYLTLPVRNLHPVPDDMPDEVAVFSEPLAAACRIVEQGLVSYNDPPD-KVAILGDGKLGLMIAEVLGREHT-----------ERVG-----------NALD------APVLFGKHEHKLQLVSDAG-----VITKLIKECQDSSAFNGVSPAYAGKFDVVVDATGSPDALALSAALCRPMGTLVLKSTCASTPEKPFNSAPFVIDELKVVGSRCGPIDRALALLAIPDSDPNRRSLNVAKYITKSFPLSRADEAIRCAAAKSTMKVQIICN 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19049.5256.1 >prot_H-elongata_contig19049.5256.1 ID=prot_H-elongata_contig19049.5256.1|Name=mRNA_H-elongata_contig19049.5256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=335bp MGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCback to top mRNA from alignment at H-elongata_contig19049:1534..6156+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19049.5256.1 ID=mRNA_H-elongata_contig19049.5256.1|Name=mRNA_H-elongata_contig19049.5256.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4623bp|location=Sequence derived from alignment at H-elongata_contig19049:1534..6156+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19049:1534..6156+ >mRNA_H-elongata_contig19049.5256.1 ID=mRNA_H-elongata_contig19049.5256.1|Name=mRNA_H-elongata_contig19049.5256.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2010bp|location=Sequence derived from alignment at H-elongata_contig19049:1534..6156+ (Himanthalia elongata Himel1 dioecious)back to top |