mRNA_H-elongata_contig19049.5256.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19049.5256.1
Unique NamemRNA_H-elongata_contig19049.5256.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S2SK93_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK93_9STRA)

HSP 1 Score: 296 bits (759), Expect = 6.890e-91
Identity = 177/335 (52.84%), Postives = 204/335 (60.90%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLAC---TCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEA-KAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCSP 1029
            YMGF GV+GHEFVG+ E          D   L GKRVVG+INLAC     C  CG GG RARNHCPNRTVLGIL K GTYA+YLTLP  NLHVVP++VS A+A F EPLAAACRI+EQGL  P   + AVLGDGKLGLLIAEV+ R        T          E     C              T L GRH EKM L       A       + S   A+ +  G +DVV+DATGSPQGL  A +LCR +GT+VLKSTCA GT FN AP VI+E RV+GSRCGPF  AL LL SG +D+ + I+  FP E  + AL  A +KG LKVQ+   P
Sbjct:   62 YMGFAGVLGHEFVGLCETAP------PDAQDLVGKRVVGDINLACGKVATCHTCGCGGVRARNHCPNRTVLGILNKDGTYAQYLTLPVTNLHVVPESVSTANAAFVEPLAAACRIVEQGLIDPTTDRVAVLGDGKLGLLIAEVVGRHVHGGASST----------EEPSSPC--------------TVLFGRHPEKMALVSQEAHVA-------VHSSEDALPTHGGQYDVVIDATGSPQGLDLAQKLCRPLGTLVLKSTCAAGTDFNTAPFVIDELRVIGSRCGPFPEALALLESG-LDLTKLITASFPFEQVDEALRKAASKGCLKVQLSFPP 358          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S1AD40_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AD40_NOCSC)

HSP 1 Score: 277 bits (708), Expect = 2.100e-83
Identity = 159/330 (48.18%), Postives = 200/330 (60.61%), Query Frame = 1
Query:   43 GFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCSPS 1032
            GF G++GHEFVG V          S    + GKRV GE+N++C  C +C  GG  ARNHC  R+VLGIL   GTYAE+LTLP  NLHVVPD +S+ +AVF EPLAAA R++EQGL  PE +  V GDGKLGLL+AEVLAR+  +  P                                   L+GRH +KM L     +A E           S VA LAGSFDVVV+ATG+P GL +A  L   MGTVVLKSTCA+    + +P+V+ E +VVGSRCGPF  A+ LL+SG +DV++Y+S VFPLE+ + ALE A  +G LKVQ+  + S
Sbjct:   60 GFTGILGHEFVGEVVVA-------SSAPEIVGKRVCGELNVSCNSCGICSRGGSLARNHCLRRSVLGILNHDGTYAEFLTLPVSNLHVVPDGISNEAAVFVEPLAAAFRVVEQGLVQPEHRVCVQGDGKLGLLVAEVLARQGLSPKP----------------------------------VLLGRHADKMALLGDLVQAREASSPE---ESDSLVAELAGSFDVVVEATGTPLGLTSAASLVLPMGTVVLKSTCASPATIDTSPLVVRELKVVGSRCGPFPEAVTLLNSGDLDVQKYVSAVFPLENADKALEMAGTRGCLKVQLAVASS 345          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A0M0JNU1_9EUKA (L-threonine 3-dehydrogenase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNU1_9EUKA)

HSP 1 Score: 275 bits (704), Expect = 5.610e-83
Identity = 170/331 (51.36%), Postives = 200/331 (60.42%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLAC---TCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRK-SASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQI 1017
            YMGF GVVGHEFVG+VE             AL GKRVVG+INL C     C  C  G DRARNHCP RTVLGIL K GTY E +TLP +NLHVVPD+VS  +A FAEPLAAA RI+EQ L  P  K AV+GDGKLG+LIAEVL R + +A  P+                                   +GRH EKM L  S   A E      +ASD   + S A SFDVVVDATGSP GL  A  LCR +GT+VLKSTCA G  FN AP V++E +++GSRCGPF  AL+LL+SG +D+   I+  FPL +   A+  A  KG +KVQI
Sbjct:   49 YMGFAGVVGHEFVGIVESAPA------GYEALHGKRVVGDINLVCGNVESCFTCACGWDRARNHCPVRTVLGILNKDGTYQERITLPAKNLHVVPDHVSSENAAFAEPLAAAFRIVEQKLVAPTDKVAVVGDGKLGVLIAEVLGRAQVAAGGPRVV--------------------------------FVGRHPEKMALV-SAAAAVEP-----VASD-GVLPSGASSFDVVVDATGSPAGLDLARALCRPLGTLVLKSTCAAGANFNTAPFVVDELKIIGSRCGPFPPALELLASG-LDLTPLITATFPLTEASAAVAKAATKGTMKVQI 333          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S0Q5J9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5J9_9EUKA)

HSP 1 Score: 275 bits (703), Expect = 1.220e-82
Identity = 169/333 (50.75%), Postives = 205/333 (61.56%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACT---CCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCS 1026
            YMGF+G+VGHEFVG+ E     G  H     L GKRVVGEINLAC     C+ C  GG RARNHCP RTVLGIL K GTYA+YLTLP +NLHVVPD+V+  +A FAEPLAAA RI+EQGL     + AV+GDGKLGLLI+EVL R  +A+                        GG           L GRH  KM L  S G   +T L+       +A+   A +FD+VVDATGSP GL  + E+CR MGTVVLKSTCA    FN AP VI+E RV+GSRCGPF+ AL LL+ G +D+   ++  FPL +   A+  A  KG +K+Q+V S
Sbjct:   70 YMGFSGIVGHEFVGICETAPA-GHTH-----LIGKRVVGEINLACADLATCSTCACGGARARNHCPTRTVLGILRKDGTYAQYLTLPARNLHVVPDSVTTENAAFAEPLAAAFRIVEQGLVRATDRVAVIGDGKLGLLISEVLGRHAAAA------------------------GGP-------RPVLFGRHDSKMRLLSS-GANVDTELSV------NALPENAAAFDLVVDATGSPAGLDLSREICRPMGTVVLKSTCAASKDFNTAPFVIDELRVMGSRCGPFKPALQLLAEG-LDLTPLVTKRFPLSEATDAIREAGKKGCMKIQLVIS 357          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S4EC03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EC03_9STRA)

HSP 1 Score: 274 bits (700), Expect = 3.070e-82
Identity = 167/328 (50.91%), Postives = 199/328 (60.67%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARR-KSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQI 1017
            YMGF GVVGHEFVG+     C    HS  H L GKRVVGEINLAC  C +C  GG RARNHCP RTVLGIL K+GTY E LTLP +NLHVVPD V   +A FAEPLAAA R++EQ L P + K A++GDGKLGLLI EVL R  +   +P+                                  L GRH  KM L  S  +  +T L     SD +A+   A ++DVVVDATGSP GL  + +LCR+ GT+VLKSTCA GT FN AP V++E RV GSRCGPF  AL+LL +  +D+   I   FPL     A++ A  +G LKVQI
Sbjct:   70 YMGFEGVVGHEFVGL-----CESAPHSHQH-LVGKRVVGEINLACNTCMLCERGGPRARNHCPKRTVLGILNKNGTYQERLTLPARNLHVVPDCVKTENAAFAEPLAAAFRVVEQNLVPAKTKIAIVGDGKLGLLIGEVLGRHAQRTGSPRPV--------------------------------LYGRHVSKMKLLSSESQ-CDTAL-----SD-TALPKNAYAYDVVVDATGSPAGLDLSRQLCRTEGTLVLKSTCAAGTDFNTAPFVVDELRVQGSRCGPFGPALELLKT--LDLTPLIDSTFPLAKAPEAVKRAGERGCLKVQI 350          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: UPI00109BE96A (uncharacterized protein LOC110253280 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE96A)

HSP 1 Score: 268 bits (684), Expect = 5.550e-80
Identity = 154/333 (46.25%), Postives = 204/333 (61.26%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDR----ARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGT-GFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIV 1020
            YMGF GV+GHEFVGVVE+V       +       +RVVGEINLAC  C VC    DR     RNHCPNRTVLGIL K G YA+Y+TLP +NL  VPD+V+D  A F EPLAAACRI+EQ L  P  + A++GDGKLGLLI EVLA                        QDC +              L GRH+EK++L        + + T+ +  D + +   + +FDV V+A+GSPQGL+ A E+ RS+GT+VLK+TCA GT G N AP V+ E +++GSRCGPF+AA+D+L  G ++V++ ++  +P      A+E AK KG LK+Q++
Sbjct:   64 YMGFTGVIGHEFVGVVEKVSA-----NSXGIKXNQRVVGEINLACLSCDVCE---DRQSILCRNHCPNRTVLGILHKDGCYADYITLPVRNLLPVPDSVTDQQACFIEPLAAACRIVEQKLVQPRQRVAIIGDGKLGLLITEVLAA-----------------------QDCSE------------VVLFGRHEEKLSLV------PKNVTTQLVPKDET-MPEFSDTFDVCVEASGSPQGLILAGEITRSLGTIVLKTTCAVGTSGLNMAPFVVKELKIIGSRCGPFQAAIDVLKGGHVNVDKLLTKAYPFSQCFEAIEHAKKKGTLKIQLI 346          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A1E7FAK7_9STRA (GroES-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAK7_9STRA)

HSP 1 Score: 268 bits (684), Expect = 9.650e-80
Identity = 176/374 (47.06%), Postives = 214/374 (57.22%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALT----GKRVVGEINLACTCCTVC-------GVGGD---RARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLA---PPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAV----ASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLS---------SGG------------IDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCSPS 1032
            YMGF GV+GHEFVGVVEE+      ++DD ++      KRV G+IN+ C+ C VC        V G+    +RNHCP R+VLGIL ++GT AEYLTLP  NLH VP +VSD  AVFAEPLAAACRI+EQGL    PP+ K A+LGDGKLGL+IAEVL R  S                   R  C K         +    L G+HK K++L   R  A     +     D  A     A  AG FDVVVDATGSP GL  A  LCR MGT+VLKSTCA G  FN AP VI+E RVVGSRCGP + ALDLL+         SG             ++V +YI+  FPL +   A++ A  K  +KVQI+C+ S
Sbjct:   29 YMGFTGVLGHEFVGVVEEI------NTDDESIKEKWLNKRVCGDINVGCSSCNVCLNFPHDRNVKGNCPMMSRNHCPTRSVLGILNRNGTIAEYLTLPVSNLHEVPSHVSDEVAVFAEPLAAACRIVEQGLVRVIPPD-KVAILGDGKLGLMIAEVLGREHST------------------RLGCSK---------YPKPILFGKHKHKLDLV--RESAGVDCRSVSDCKDEKAFNGVSAEYAGQFDVVVDATGSPAGLSLASGLCRPMGTLVLKSTCAAGEKFNAAPFVIDELRVVGSRCGPIDKALDLLAITNDNKIDGSGNDSSNNKKANIRPLNVVKYITRTFPLSEAVAAIKCAAEKSTMKVQIICNES 366          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S1Y2C0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2C0_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.090e-79
Identity = 166/352 (47.16%), Postives = 215/352 (61.08%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDR-----ARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAPPEA--KAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIAS--DRSA----VASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLS----SGGID---VERYISGVFPLEDTEVALEAAKAKGALKVQIVCSPS 1032
            YMGF G++GHEFVG V ++R   G+ S       KRV G+IN+ C  C VC    D      +RNHCPNRTVLGIL ++GT AEYLTLP QNLH+VPD++SD  AVF+EPLAAACRI+EQGL   E+  K A+LGDGKLGL+IAEV+ R +  S   T  + E  +                         L G+H  K+ L  + G     ++T+ ++   D SA     A+ A ++DVVVDATG+P  L+ A  LCR MGTVVLKSTCA G  FN AP VI+E RV+GSRCGP + AL+LL+      GI    V++Y++  FPL   + A+E A  +  +KVQI+CS S
Sbjct:   85 YMGFQGILGHEFVGKVVDIRT--GDDSLKTKYMNKRVCGDINVGCFSCRVCQGSRDSCCSQMSRNHCPNRTVLGILNRNGTMAEYLTLPVQNLHLVPDHISDEDAVFSEPLAAACRIVEQGLVSIESSDKVAILGDGKLGLMIAEVMGR-EYLSVKGTAEAPEPPI-------------------------LFGKHDHKLKLVENSG-----VITKMVSDCQDDSAFNGVAAAHAAAYDVVVDATGNPAALLLAAGLCRPMGTVVLKSTCAAGEQFNAAPFVIDELRVIGSRCGPIDKALELLALQEDDAGIPSLRVQKYVTKTFPLSQAKEAVECAAKRETMKVQIICSTS 403          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A7S2KFL9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFL9_9STRA)

HSP 1 Score: 268 bits (685), Expect = 4.710e-79
Identity = 162/353 (45.89%), Postives = 200/353 (56.66%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLAP-PEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSG----------------------GIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCS 1026
            YMGF G++GHEFVG+V  V     +  D     GKRV G+IN+ C  C +C +G DR+RNHCPNRTVLGIL K GT AEYLTLP  NLH VP+NVSD  AVFAEPLAAACRI+EQ +    E + A+LGDGKLGL+IAEVL R                    + + D  K  GI E K      L+G+H  KM L    G      ++     + +        FDVV+DATG+  GL  +  L R MGT+VLKSTCA+G  FN AP VI+E +VVGSRCGPF  AL LLS                        G++  +YI+  +PL   E AL  A  +  +KVQI+CS
Sbjct:   87 YMGFQGILGHEFVGIVHSVNASAAQR-DAWTWIGKRVCGDINICCQSCDICSLGTDRSRNHCPNRTVLGILNKDGTMAEYLTLPINNLHEVPENVSDGDAVFAEPLAAACRIVEQNVINFDEDRVAILGDGKLGLMIAEVLGRE-----------------FLKVQDDAEKSEGI-EGKSIPKPLLLGKHANKMKLVEESGAQCRN-ISDCKDEEGNIRPEYTQQFDVVIDATGNSAGLAISTSLTRPMGTIVLKSTCASGDLFNAAPFVIDELKVVGSRCGPFPKALQLLSISDDSDETNGDGSAGCCKASSCMKGLNATKYITRYYPLSQAEEALAFAAERSTMKVQIICS 419          
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Match: A0A1Z5KM79_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM79_FISSO)

HSP 1 Score: 261 bits (666), Expect = 4.590e-77
Identity = 168/354 (47.46%), Postives = 211/354 (59.60%), Query Frame = 1
Query:   37 YMGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVCGVGGDR-----ARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAVFAEPLAAACRIIEQGLA----PPEAKAAVLGDGKLGLLIAEVLARRKSASTPKTTTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGKAAETMLTRFI--ASDRSAVASL----AGSFDVVVDATGSPQGLVTALELCRSMGTVVLKSTCATGTG--FNPAPVVINEQRVVGSRCGPFEAALDLLS-------SGGIDVERYISGVFPLEDTEVALEAAKAKGALKVQIVCS 1026
            YMGF GV+GHEFVG+VEEV       S D    GKRV G+IN+ C  C VC    D      +RNHCPNR+VLGILG++G+ AEYLTLP +NLH VPD++ D  AVF+EPLAAACRI+EQGL     PP+ K A+LGDGKLGL+IAEVL R  +           E VG             +D      +  L G+H+ K+ L    G     ++T+ I    D SA   +    AG FDVVVDATGSP  L  +  LCR MGT+VLKSTCA+     FN AP VI+E +VVGSRCGP + AL LL+          ++V +YI+  FPL   + A+  A AK  +KVQI+C+
Sbjct:   53 YMGFTGVLGHEFVGIVEEVH-----DSKDADWIGKRVCGDINVGCAACGVCDKQYDHRCSQMSRNHCPNRSVLGILGRNGSMAEYLTLPVRNLHPVPDDMPDEVAVFSEPLAAACRIVEQGLVSYNDPPD-KVAILGDGKLGLMIAEVLGREHT-----------ERVG-----------NALD------APVLFGKHEHKLQLVSDAG-----VITKLIKECQDSSAFNGVSPAYAGKFDVVVDATGSPDALALSAALCRPMGTLVLKSTCASTPEKPFNSAPFVIDELKVVGSRCGPIDRALALLAIPDSDPNRRSLNVAKYITKSFPLSRADEAIRCAAAKSTMKVQIICN 367          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19049.5256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2SK93_9STRA6.890e-9152.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1AD40_NOCSC2.100e-8348.18Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A0M0JNU1_9EUKA5.610e-8351.36L-threonine 3-dehydrogenase n=1 Tax=Chrysochromuli... [more]
A0A7S0Q5J9_9EUKA1.220e-8250.75Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4EC03_9STRA3.070e-8250.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI00109BE96A5.550e-8046.25uncharacterized protein LOC110253280 isoform X1 n=... [more]
A0A1E7FAK7_9STRA9.650e-8047.06GroES-like protein n=1 Tax=Fragilariopsis cylindru... [more]
A0A7S1Y2C0_9STRA1.090e-7947.16Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2KFL9_9STRA4.710e-7945.89Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5KM79_FISSO4.590e-7747.46Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19049contigH-elongata_contig19049:1534..6156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.4
Seed ortholog evalue1.3e-60
Seed eggNOG ortholog115417.EPrPW00000023499
EggNOG free text desc.Glucose dehydrogenase C-terminus
EggNOG OGs1MK8G@121069,COG1063@1,KOG0024@2759
COG Functional cat.Q
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size2108
Cds size1005
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19049.5256.1prot_H-elongata_contig19049.5256.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19049 1573..5092 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930088.547599-UTR-H-elongata_contig19049:1533..15721622930088.547599-UTR-H-elongata_contig19049:1533..1572Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19049 1534..1572 +
1691679276.1130483-UTR-H-elongata_contig19049:1533..15721691679276.1130483-UTR-H-elongata_contig19049:1533..1572Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19049 1534..1572 +
1622930088.6526504-UTR-H-elongata_contig19049:5092..61561622930088.6526504-UTR-H-elongata_contig19049:5092..6156Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19049 5093..6156 +
1691679276.1830118-UTR-H-elongata_contig19049:5092..61561691679276.1830118-UTR-H-elongata_contig19049:5092..6156Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19049 5093..6156 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930088.5589688-CDS-H-elongata_contig19049:1572..16991622930088.5589688-CDS-H-elongata_contig19049:1572..1699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 1573..1699 +
1691679276.1258633-CDS-H-elongata_contig19049:1572..16991691679276.1258633-CDS-H-elongata_contig19049:1572..1699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 1573..1699 +
1622930088.5720692-CDS-H-elongata_contig19049:2532..26721622930088.5720692-CDS-H-elongata_contig19049:2532..2672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 2533..2672 +
1691679276.13466-CDS-H-elongata_contig19049:2532..26721691679276.13466-CDS-H-elongata_contig19049:2532..2672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 2533..2672 +
1622930088.5851922-CDS-H-elongata_contig19049:3148..34901622930088.5851922-CDS-H-elongata_contig19049:3148..3490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 3149..3490 +
1691679276.1428254-CDS-H-elongata_contig19049:3148..34901691679276.1428254-CDS-H-elongata_contig19049:3148..3490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 3149..3490 +
1622930088.599866-CDS-H-elongata_contig19049:4052..41861622930088.599866-CDS-H-elongata_contig19049:4052..4186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 4053..4186 +
1691679276.1506484-CDS-H-elongata_contig19049:4052..41861691679276.1506484-CDS-H-elongata_contig19049:4052..4186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 4053..4186 +
1622930088.615851-CDS-H-elongata_contig19049:4549..47101622930088.615851-CDS-H-elongata_contig19049:4549..4710Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 4550..4710 +
1691679276.1584647-CDS-H-elongata_contig19049:4549..47101691679276.1584647-CDS-H-elongata_contig19049:4549..4710Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 4550..4710 +
1622930088.6373096-CDS-H-elongata_contig19049:4991..50921622930088.6373096-CDS-H-elongata_contig19049:4991..5092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 4992..5092 +
1691679276.1682806-CDS-H-elongata_contig19049:4991..50921691679276.1682806-CDS-H-elongata_contig19049:4991..5092Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19049 4992..5092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19049.5256.1

>prot_H-elongata_contig19049.5256.1 ID=prot_H-elongata_contig19049.5256.1|Name=mRNA_H-elongata_contig19049.5256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=335bp
MGFNGVVGHEFVGVVEEVRCRGGEHSDDHALTGKRVVGEINLACTCCTVC
GVGGDRARNHCPNRTVLGILGKHGTYAEYLTLPCQNLHVVPDNVSDASAV
FAEPLAAACRIIEQGLAPPEAKAAVLGDGKLGLLIAEVLARRKSASTPKT
TTSTEEGVGLERGRQDCGKDGGIDEFKQHGSTTLIGRHKEKMNLCCSRGK
AAETMLTRFIASDRSAVASLAGSFDVVVDATGSPQGLVTALELCRSMGTV
VLKSTCATGTGFNPAPVVINEQRVVGSRCGPFEAALDLLSSGGIDVERYI
SGVFPLEDTEVALEAAKAKGALKVQIVCSPSLSV*
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mRNA from alignment at H-elongata_contig19049:1534..6156+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19049.5256.1 ID=mRNA_H-elongata_contig19049.5256.1|Name=mRNA_H-elongata_contig19049.5256.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4623bp|location=Sequence derived from alignment at H-elongata_contig19049:1534..6156+ (Himanthalia elongata Himel1 dioecious)
CCGCGCAATATTTTATTATTTTTGTTCCTCTTCAGGTACATGGGCTTCAA CGGGGTGGTCGGGCATGAATTCGTGGGGGTCGTGGAAGAGGTCCGTTGTC GCGGCGGGGAACACTCTGATGACCACGCGCTCACGGGAAAGCGTGTCGTG GGGGAAATCAATCTAGGTGGGTGAAGTTCTCGCGCTTTAGTGTGCACAAA ACGATTTAACGTGTCCGGGCGAGCCGATTATTTCCCTGCCAAGGAGTGAG AGGGGGCTCGCGTGTGCGTGATGTACTTCGGTTTCAAACGCGCGAGGCTA ACAGCTCTACGCCAGCCTACGAGCTCCGCTTTGGTCTGCCTCTTGAACAG GCAAGAATTCACGATAAGCGTTTGTGGCAGTATGTGTAAGTAATGAAAGA GCAAGTTGTAACGCATTTACAGCAAATTATTACTACTCAGTACTCAGCAC TCGTTCTACTATACGTATCTCGTCATTGGGATTGTATATTTCTATATATA TATACATCGTATGTGTAACATATATATATATATATATCCGTAGACGTAAT CAGCCCCGTCTCGACTCTTCTTCGCCTGGACACGGTTTCTGACTGGCGTC TTCGGGTGTTTAGACGCCCCGATGGGTGATGGTTTTCCATCAAAGGCTTG TTTCTTCCCCTCTTGAATTTTCCACGGCCCGATGGATCTGGACCGGTTAA GGTTGCGCGTCATCGACGCGTTTCGAGTATCGCGCGAGGAAAGTGTATGC ACAATAGAATTTGGATGGCGTTAAGAAGGTGTTGATGTTCGGAGGACTGG AATGAGTTCAAGGTTTTTCTAATAAGAATGTTGTAGCGCCCAATGCGAGC TGCATCGAGTCGAGCCGAGTTGATCAAGATTTCTACGCCACCGCCAAACG GTCGATGTTCCTGCTCCTGCTTCCTCGATCGCTTCTGCGTCGCGTGGGGC TCCTCCTACGACTGCGATGTTGCGTATCGTGAACTGGATGACCGTGCAGC GTGCACATGCTGCACGGTATGCGGGGTTGGCGGGGATCGCGCCCGGAACC ACTGCCCGAACCGGACGGTCCTCGGCATCCTCGGCAAGCACGGGACTTAC GCCGAGTACCTGACCCTACCTTGCCAAAACCTCCACGTGGTAAGAGCTAC CAGGTACACGGCATGGCAAAGGGAGCCTGGCAGCCTCAAACATTGCCACG TGCGATTCAATCAGTAGAAAGAGGAAACGGAGGTCTGATCCAATTCGAAA CAAAAAGAGGCGTGTGTCGTGCGGGATGGGAGGATCATAGACTTGGCTTA CTACTATACGAAGTAAATAATCGTTTGCACAGTGCAAGATGGTGAAATAC CCTCACACCGAGGGAGAGATAAAGAAAGAAAGGAAAAACCCAATCGTACA AGGGTCGACGCAAGCTCATCTTGAGGAGGCGGGGCGGACGAGGGGCGGGG ACGACGAGTCGAGCCTCAAGCGGGTTTCCACCGCACGAAGGAGCCTTCCC CACAAGCTGGCGACTTGTTAGAGGGAAGATGATGAACACCAGTGACGTAG CTGACTCGCGTTTACTATAAAAGTGCAAATACCAAGCAAATGTCCATTTC ATTGCCGTGGTGCAGGTGCCCGACAACGTCAGCGACGCGTCCGCCGTTTT TGCGGAGCCCCTGGCCGCGGCGTGCCGGATAATCGAGCAGGGGCTGGCAC CGCCCGAGGCTAAGGCGGCGGTGCTCGGCGACGGGAAGCTTGGGCTGCTG ATCGCCGAAGTCCTCGCTCGAAGGAAGAGCGCTTCCACACCGAAGACGAC TACGTCCACGGAGGAGGGCGTCGGTCTCGAAAGAGGGCGCCAGGATTGCG GCAAAGACGGAGGCATCGACGAGTTCAAGCAGCACGGGAGCACCACGCTG ATCGGCCGACACAAGGAAAAGATGAACCTGTGCTGCAGCAGGGGCAAGGC GGCGGAGGTGAGACCGGAAGGTGAAAATCAAAGATTCACGGACCAGCGCT TTGATTTTTTGTCTTTCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCT TATTTTTTTTTTTTTTTTTTTTTTCCCCCCCCCCNNNNNNNNNNGGGAGA AATAAAAAATTCCCGGACCCCGCCTTTTATTTTTTTTCTTTCCCCCCCCC CCCCCCCCCCTTCCACGGTCAATCGATATTGATTGACTAGTTTTATCGCG CGCGCACCATGTAGTTCGGTGCCAGCGACGTGATTGATGTCCACGGTACG TGTAACAGTACATGGTGCGTGGAAGCTCTTCGTCGGAAAAAGTACCTGGA ATGTCAAGGGCATCTTATCATGGCTCTTGAGCAGCGCTGGTCCGCGAGCC ACGAAATGTGTGTGTGTGTGTGTGTATTTTTTTTCTGTCGCAAGGAGCGC CTACTGGCATTTTTACGAGATTCCCTTCGTGTTGTTTTATTTCCGCGTTA CCTAGGTCCTCTGATTCCTCATCGCACGTAACTTTGATATTCCAATGTGC TCCTTCACTTGCTTGCCAGACGATGCTGACGCGATTCATCGCCAGCGATC GGTCTGCTGTGGCCTCCCTCGCCGGAAGCTTTGACGTCGTCGTGGATGCC ACCGGCAGTCCTCAAGGCCTAGTTACCGCTCTGGAGCTCTGTCGATCTAT GGGGTGCGCGCAAAGCAAATATACATTCTAAATAGCGAAAAAAAGTGCCA GCAGCCAATCTATGCGGTGCGTGTGTGTGTTGGTTCGTGTATACGAGTGG GTAGGAAGTTGCGTTTGCTCGCGAGACTTATTCCTGTGTTCCTTCATTTG AGGAGAATCTCCAGAAGTCATTTTGGTGTCCTTGGTCTTTTATCTCATCC GCGCAAGACTTCCCCTACCCTACGGCTAGTAGAAGTTCGCGCTCCAGAAG GCACCGAAAATTGCAATCCGCCTCCCTCGCCCTGGCGGCCGACGCCACAC CGCTCGACTGCACATCATCCTTTCCCACCTTTCTATATGAACTGGACACT TTTCACTTTTTACCAGCACCGTCGTGCTCAAGTCTACATGCGCTACCGGG ACTGGCTTCAACCCCGCCCCCGTAGTGATCAATGAGCAGAGAGTTGTGGG ATCACGCTGTGGTCCGTTCGAGGCCGCGCTTGACCTGCTGTCCTCAGGCG GGATCGACGTGGAGCGCTACATCTCGGGTAAGATGCGCTCTCCAGGATGA AGAATCGGTAATGCTCTTGGGTACCTCGGTCTGCAAATTTTGACTTGAAG ATCAATCTCCTCATTTGTTTCGTTCTTTTGCCGACACACGTGTAGCTAAT TCCACCAGCTCTACACTTGGCGGAGCTCTAGCGTCGCCCAAGGCGTAAGT TCACAAGATATTTATGTACGCCTACGCCTCCGATATATTGCTATGACCGT TTCGGCTGCTCCTCGCTCGTTTATTACCTCCACGCTCTTCCCCCGTCTTC AATCGCAGGTGTCTTCCCGCTGGAAGATACTGAAGTGGCGTTGGAGGCTG CGAAAGCAAAGGGCGCGCTGAAAGTGCAAATCGTCTGCTCGCCCTCCCTC AGCGTTTGATACGAGGTGGCGTGGTGAGATTGGTCAAGCCGTTGTTTTGT CTGGTGTTTCTCTCTCAGGGTGCTTCTGACGAGGGAAAGTTGCGGCAGGC CGCAGCGGCAGCATTCATGCAGCTTTCGAGTGTGACTATTTGTTGAAGCG CTGAAAAACTGGCGTCTTCAAGACCTTTAAGAGACTTAAGGCATTCGTTC TAGTTAACCGTGTACGAGTTCATATGGCTTGAGCTAGGGAACAAAATGCG TACCATGGTGGGGGCACATAGCTTTACTTATCATGAGAAATCGCCGGGCG CTAAGTAGTGCGCCGCCTCTAGTCTATTATCTATATACCGTTTAAGAAAT GAACTTTGCTCTGACATCATAGTTGAAAGTGAAATGGAAGTCGTGGCTTT AAGTTATACTTGTATATTTCAATGTTAGAAAAAACGACGATACGAAGTTG GTCCCCTGGACTGCACCTCTTATGGTGCTAAGAAGGTGTGGATGTTCGGA GGGTTGAAATGAGTTCTTATGTTTTTTAATAATAAAAAATGACGATACGA AGGTAGGTGTCAGCGTTCCGATTTGATGATTCGCTCCCATCGTGGAATTT ACTGTGGAAAGAGAGACAACGAGCTCTACATTTGTCCGTGTTTTACTGGC GTAAATATTTAGAGGTACCCTACCCTCTGTACTTTGGCTCCGTGTGAAGG TTGAGAAGGGGCACCGGCGATGCCGCAGCGATGGGCTTAGGCACGCGTGA TCTCAGCCCATTTTCGTCTTTTGTACCAGATGGTACCTCCGATACTGTAT GTAACTGTATCGCACATGCCCACGCTACCAAGAGTGGATGTGGAAAAAGA GAGGCGTACAATAATTGGTCCATGGGGTTACCTGAATAGGGTGCACCCGT TACTCAAGCTACCTCGAAGAATGCTTGCTCAGTCAGTGCCGGTGGACTCT CGGTGGTAAACGACATCGGTACGCAATTGCGTGACCTGATAAATCAGGAT TGGCCCGATGGCGGTTTGACCAGAAAACGAGAGGAGCCCGGGAGTACGCA CCAGATTCAGCCTGAGTTGAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig19049:1534..6156+

>mRNA_H-elongata_contig19049.5256.1 ID=mRNA_H-elongata_contig19049.5256.1|Name=mRNA_H-elongata_contig19049.5256.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2010bp|location=Sequence derived from alignment at H-elongata_contig19049:1534..6156+ (Himanthalia elongata Himel1 dioecious)
ATGGGCTTCAACGGGGTGGTCGGGCATGAATTCGTGGGGGTCGTGGAAGA
GGTCCGTTGTCGCGGCGGGGAACACTCTGATGACCACGCGCTCACGGGAA
AGCGTGTCGTGGGGGAAATCAATCTAGATGGGCTTCAACGGGGTGGTCGG
GCATGAATTCGTGGGGGTCGTGGAAGAGGTCCGTTGTCGCGGCGGGGAAC
ACTCTGATGACCACGCGCTCACGGGAAAGCGTGTCGTGGGGGAAATCAAT
CTAGCGTGCACATGCTGCACGGTATGCGGGGTTGGCGGGGATCGCGCCCG
GAACCACTGCCCGAACCGGACGGTCCTCGGCATCCTCGGCAAGCACGGGA
CTTACGCCGAGTACCTGACCCTACCTTGCCAAAACCTCCACGTGCGTGCA
CATGCTGCACGGTATGCGGGGTTGGCGGGGATCGCGCCCGGAACCACTGC
CCGAACCGGACGGTCCTCGGCATCCTCGGCAAGCACGGGACTTACGCCGA
GTACCTGACCCTACCTTGCCAAAACCTCCACGTGGTGCCCGACAACGTCA
GCGACGCGTCCGCCGTTTTTGCGGAGCCCCTGGCCGCGGCGTGCCGGATA
ATCGAGCAGGGGCTGGCACCGCCCGAGGCTAAGGCGGCGGTGCTCGGCGA
CGGGAAGCTTGGGCTGCTGATCGCCGAAGTCCTCGCTCGAAGGAAGAGCG
CTTCCACACCGAAGACGACTACGTCCACGGAGGAGGGCGTCGGTCTCGAA
AGAGGGCGCCAGGATTGCGGCAAAGACGGAGGCATCGACGAGTTCAAGCA
GCACGGGAGCACCACGCTGATCGGCCGACACAAGGAAAAGATGAACCTGT
GCTGCAGCAGGGGCAAGGCGGCGGAGGTGCCCGACAACGTCAGCGACGCG
TCCGCCGTTTTTGCGGAGCCCCTGGCCGCGGCGTGCCGGATAATCGAGCA
GGGGCTGGCACCGCCCGAGGCTAAGGCGGCGGTGCTCGGCGACGGGAAGC
TTGGGCTGCTGATCGCCGAAGTCCTCGCTCGAAGGAAGAGCGCTTCCACA
CCGAAGACGACTACGTCCACGGAGGAGGGCGTCGGTCTCGAAAGAGGGCG
CCAGGATTGCGGCAAAGACGGAGGCATCGACGAGTTCAAGCAGCACGGGA
GCACCACGCTGATCGGCCGACACAAGGAAAAGATGAACCTGTGCTGCAGC
AGGGGCAAGGCGGCGGAGACGATGCTGACGCGATTCATCGCCAGCGATCG
GTCTGCTGTGGCCTCCCTCGCCGGAAGCTTTGACGTCGTCGTGGATGCCA
CCGGCAGTCCTCAAGGCCTAGTTACCGCTCTGGAGCTCTGTCGATCTATG
GGACGATGCTGACGCGATTCATCGCCAGCGATCGGTCTGCTGTGGCCTCC
CTCGCCGGAAGCTTTGACGTCGTCGTGGATGCCACCGGCAGTCCTCAAGG
CCTAGTTACCGCTCTGGAGCTCTGTCGATCTATGGGCACCGTCGTGCTCA
AGTCTACATGCGCTACCGGGACTGGCTTCAACCCCGCCCCCGTAGTGATC
AATGAGCAGAGAGTTGTGGGATCACGCTGTGGTCCGTTCGAGGCCGCGCT
TGACCTGCTGTCCTCAGGCGGGATCGACGTGGAGCGCTACATCTCGGCAC
CGTCGTGCTCAAGTCTACATGCGCTACCGGGACTGGCTTCAACCCCGCCC
CCGTAGTGATCAATGAGCAGAGAGTTGTGGGATCACGCTGTGGTCCGTTC
GAGGCCGCGCTTGACCTGCTGTCCTCAGGCGGGATCGACGTGGAGCGCTA
CATCTCGGGTGTCTTCCCGCTGGAAGATACTGAAGTGGCGTTGGAGGCTG
CGAAAGCAAAGGGCGCGCTGAAAGTGCAAATCGTCTGCTCGCCCTCCCTC
AGCGTTTGAGTGTCTTCCCGCTGGAAGATACTGAAGTGGCGTTGGAGGCT
GCGAAAGCAAAGGGCGCGCTGAAAGTGCAAATCGTCTGCTCGCCCTCCCT
CAGCGTTTGA
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