mRNA_H-elongata_contig19031.5248.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: D7FM24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM24_ECTSI) HSP 1 Score: 298 bits (764), Expect = 1.340e-97 Identity = 147/188 (78.19%), Postives = 164/188 (87.23%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDWLSGVGPAAVSLVFVAAYKLGKKVNSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWKYRPEAELELEGRTYSRINIPMWVGCVIVIGWAVVLVGSLTLFPESGLGALFKAFFRIGSIIYGGGQ 564
MVVSMG YRAGIPGGLLSFALWN PSFI+L LAGLGV++LLGD+DPDWLSG+GPAA+SLVFVAAYKLGKKVN + LKF+LSLVS CVTL INGDE+I+P VSAWVFPLMLVCGG+V L D K AEL LEG+TYSRINIPMW+G I +GWA +LV S++ FP SGLG LFKAFFRIGSIIYGGGQ
Sbjct: 78 MVVSMGAYRAGIPGGLLSFALWNIPSFIVLTLAGLGVKELLGDDDPDWLSGLGPAAISLVFVAAYKLGKKVNKSPLKFSLSLVSACVTLLINGDEDINPNVSAWVFPLMLVCGGLVMLADSK----AELALEGKTYSRINIPMWLGGAIAVGWATILVVSISAFPGSGLGGLFKAFFRIGSIIYGGGQ 261
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A2R5G6L9_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6L9_9STRA) HSP 1 Score: 150 bits (380), Expect = 7.670e-40 Identity = 93/209 (44.50%), Postives = 124/209 (59.33%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDWLSGVGPAAVSLVFVAAYKLGKKVNS------TKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWK--------YRPEAEL-ELEGRTYSR-INIPMWVGCVIVIGWAVVLVGSLTL-----FPESGLGALFKAFFRIGSIIYGGGQ 564
MVV++G RAGIPGGL++F LWN PSFI+ V L L + PD+L G+ AA SLVF+AAY LG KV S KLK L+ ST TL I GD+ I+ + ++ FP+ML+ GG++T+VD + + P E+ E + R+ + INI +G ++ I W V LV + L G G LF+AFFR GSIIYGGGQ
Sbjct: 101 MVVAIGATRAGIPGGLVAFVLWNLPSFIVCVTVALLAVSTLDETLPDYLIGLPAAATSLVFLAAYSLGVKVLSHEESYVQKLKIALATASTVGTLLITGDDRINNRWASLAFPVMLIIGGVITVVDSRRPGKLENYFTPPTEIDEADNRSILKNINISPRLGLLLFITWIVTLVSFIALRSAGVLAPGGYGELFEAFFRTGSIIYGGGQ 309
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A7S3UPW9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPW9_HETAK) HSP 1 Score: 145 bits (366), Expect = 9.330e-40 Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLL-GDNDPDWLSGVGPAAVSLVFVAAYKLGKKVNSTK---LKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTL 354
MVVS GT++ GI GGLL+FALWN PSF++LVLAGLGVR L GD DP W+SG+ PAA SL+FVA + LGKKV + LK L+L S +T+ +NGD NI P SAW+FPL+LV GG+ L
Sbjct: 97 MVVSTGTFKGGILGGLLAFALWNLPSFVVLVLAGLGVRTFLDGDADPAWMSGLAPAASSLLFVACFTLGKKVTGGEPRTLKIALALTSALITVLLNGDNNIDPAASAWLFPLLLVLGGLAVL 218
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A7S2KXW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXW7_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.350e-36 Identity = 84/201 (41.79%), Postives = 121/201 (60.20%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPD-WLSGVGPAAVSLVFVAAYKLGKKVNSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWK-------YR-PEAELELEGRTYSRINIPMWVGCVIVIGWAVVLVGSLTLFPESGLG----ALFKAFFRIGSIIYGGGQ 564
+VVS RAG GGLL+F LWN P I+L G+ +++ + +DP +L G+ PAA+SLVF A Y G K++ +L L+ S + + +NGD+NI P + +VFP+ML+CGG+VT D K Y+ P+ + + +T+ RI I + VG I I WAVVLV S+ L + LF+ +RIGSII+GGGQ
Sbjct: 109 LVVSTALARAGPVGGLLAFFLWNLPGLIVLTTCGVLIKEFINPDDPPFYLIGLPPAAISLVFKAFYGFGLKLD--QLGIALATFSCIIAILLNGDDNIEPTATQYVFPIMLLCGGLVTYFDSKRENPWGTYKTPKGWDKEDDKTFKRIGISVPVGIFIWIVWAVVLVASIVLVDVGDVDNEYLQLFEKMYRIGSIIFGGGQ 307
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A485L153_9STRA (Aste57867_14606 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L153_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.140e-33 Identity = 83/204 (40.69%), Postives = 114/204 (55.88%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDWLSGVGPAAVSLVFVAAYKLGKKV-NSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVD--WKYRPEAELELEGRTYS-----RINIPMWVGCVIVIGWAVVLVGSLTLFPE--------SGLGALFKAFFRIGSIIYGGGQ 564
+V SMG +RAG GGLL+F +W P F+I+ LAGLG + LG+ P W+ G+ PAAVSLV +AA KL K ++K ++ VS CV L + K+ W+FP +++ GG+ TL + Y G + + IP WVG VI++ WAV +L+ F S LG LF AFFR+GSII+GGGQ
Sbjct: 84 VVSSMGLFRAGPLGGLLAFVIWCLPGFVIMTLAGLGAQHYLGNGLPSWMIGLAPAAVSLVIIAATKLWTKACGDDQVKMAIATVSACVVLS-------TQKLGTWIFPALMIAGGLTTLAAPLFGYTKSFVKASRGGVINPLVQRELGIPAWVGVVIILAWAVAF-ATLSYFDSVVRHALGRSFLG-LFYAFFRMGSIIFGGGQ 278
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A067CUR6_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUR6_SAPPC) HSP 1 Score: 133 bits (334), Expect = 2.560e-33 Identity = 77/202 (38.12%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDWLSGVGPAAVSLVFVAAYKLGKKV-NSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWKY---RPEAELELEGRTYS-----RINIPMWVGCVIVIGWAVVLVGSLTLFPESG-LG----ALFKAFFRIGSIIYGGGQ 564
++ SMG +RAG GG+L+F +W P F++++LAGLG ++ LG P W+ G+ PAAVSLV +AA KL +K +LK +++ +S+CV L G + W+FPL+++ GG TL P + + +S + IP W G ++++GW G L +G LG LF AFFR+GSII+GGGQ
Sbjct: 84 VLTSMGIFRAGPLGGILAFLVWTAPGFLVMLLAGLGAQEYLGAGVPLWMVGLAPAAVSLVIIAATKLWQKACGDDQLKMSIAAISSCVVLATQG-------LGTWIFPLLMIAGGFTTLSAMALGYPNPLVAAKRQDNGHSPHFERELGIPAWAGVLLILGWLAAF-GLLAYLDSTGTLGRSYLGLFYAFFRMGSIIFGGGQ 277
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A6T7FFJ8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7FFJ8_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.490e-32 Identity = 84/202 (41.58%), Postives = 111/202 (54.95%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLG-DNDPDWLSGVGPAAVSLVFVAAYKLGKKVNSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWKY-RPEAELELE--------GRTYSRINIPMWVGCVIVIGWAVVLVGSLTLFP----ESGLGALFKAFFRIGSIIYGGGQ 564
+VVS T RAG GGL++F LW P +IL + G+ + + DN P +L G+ PAA SLVF A Y K++ KL LS+ S V + INGD NI KVS WV+P ML GG+VT D + +P +E R RI IP+WVG I W +LV + L E+ +F+ +RIGSII+GGGQ
Sbjct: 122 LVVSTATSRAGPLGGLVAFFLWTLPGLVILTVCGVLIETFVDQDNAPFYLIGLPPAATSLVFKAFYGFSTKLD--KLGIFLSMCSGMVAILINGDYNIDVKVSQWVYPTMLAVGGLVTYTDSRREKPFSEYTKSKKGWDVQSDRLMKRIGIPLWVGAAIAGVWLFLLVSCILLVDVFKVENTYLGIFEVMYRIGSIIFGGGQ 321
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: B7G7I4_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7I4_PHATC) HSP 1 Score: 130 bits (328), Expect = 3.260e-32 Identity = 82/202 (40.59%), Postives = 112/202 (55.45%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDW-LSGVGPAAVSLVFVAAYKLGKKVNSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWKY-RPEAELELEGR--------TYSRINIPMWVGCVIVIGWAVVLVGSLTLFPESGLG----ALFKAFFRIGSIIYGGGQ 564
+V+S RAG GGLL+F LWN P IIL L G + + N P W L G+ PAA+SLVF A Y K++S L L+L S V + +N D++I P S WVFP L GG+VT +D K +P A G+ T RI IP+WVG +I + W +L+ + L + + +F+ +RIGSII+GGGQ
Sbjct: 124 LVISTALSRAGPLGGLLAFFLWNLPGLIILTLCGALIDAFVDPNSPPWYLIGLPPAAISLVFKAFYGFAIKLDS--LGIILALCSCLVAIVLNNDDDIDPASSQWVFPTTLALGGLVTYLDSKREKPFATYASPGKGWDKDSDETMKRIGIPLWVGALIFLLWLGILILVIILVDVAEVDNVYLKIFETMYRIGSIIFGGGQ 323
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A7S2YB08_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YB08_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.960e-32 Identity = 77/203 (37.93%), Postives = 114/203 (56.16%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDW-LSGVGPAAVSLVFVAAYKLGKKVNSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWK----YRPEAELELEG------RTYSRINIPMWVGCVIVIGWAVVLVGSLTLFPESGLG----ALFKAFFRIGSIIYGGGQ 564
+V+S T RAG GGL++F LWN P I+L G+ + + + ++ W L+G+ PAA+SLVF A Y K++S L+ ++L S+ V + IN D NI P S WVFP L GG+ T +D K + + +G T+ RI IP+WVG +I + W VL + L + + +F+ +RIGSII+GGGQ
Sbjct: 134 LVISTATSRAGPLGGLMAFFLWNLPGLIVLTCCGVLIDEFVNPDEAPWYLAGLPPAAISLVFKAFYGFASKLDS--LQIWMALCSSLVAILINNDANIKPSSSQWVFPCCLALGGLTTYIDSKRANPFSTYTKSPSKGWDRDDDTTFKRIGIPLWVGALIFLVWGGVLALVIILVDVAEVTNVYLEIFETMYRIGSIIFGGGQ 334
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Match: A0A1V9ZB66_9STRA (Chromate Ion Transporter (CHR) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB66_9STRA) HSP 1 Score: 129 bits (323), Expect = 8.190e-32 Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 1 MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDWLSGVGPAAVSLVFVAAYKLGKKV-NSTKLKFTLSLVSTCVTLFINGDENISPKVSAWVFPLMLVCGGIVTLVDWKYRPEAELELEGRTYS-------RINIPMWVGCVIVIGWAVVLVGSLTLFPESGLG----ALFKAFFRIGSIIYGGGQ 564
++ SMG +RAG GG+L+F W P F++++ AGLG ++ LG P W++G+ PAAVSLV +AA KL +K LK ++ VS+CV L G + W+FPL+++ GG+ T+ L R + + IP+WVG ++ GW L LG LF AFFR+GSII+GGGQ
Sbjct: 81 VLTSMGIFRAGPLGGILAFVTWMLPGFLVMLFAGLGAQEYLGGGVPVWMAGLAPAAVSLVIIAAVKLWQKACGDDSLKMAIAGVSSCVVLATQG-------LGTWIFPLLMLLGGLTTVAASAAGYAKPLIAPKRGHGGSPHFERELGIPLWVGAALIAGWIAAFGLLAYLDTTHALGHHYLGLFYAFFRMGSIIFGGGQ 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19031.5248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19031.5248.1 >prot_H-elongata_contig19031.5248.1 ID=prot_H-elongata_contig19031.5248.1|Name=mRNA_H-elongata_contig19031.5248.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp MVVSMGTYRAGIPGGLLSFALWNTPSFIILVLAGLGVRDLLGDNDPDWLSback to top mRNA from alignment at H-elongata_contig19031:4997..7099- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19031.5248.1 ID=mRNA_H-elongata_contig19031.5248.1|Name=mRNA_H-elongata_contig19031.5248.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2103bp|location=Sequence derived from alignment at H-elongata_contig19031:4997..7099- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19031:4997..7099- >mRNA_H-elongata_contig19031.5248.1 ID=mRNA_H-elongata_contig19031.5248.1|Name=mRNA_H-elongata_contig19031.5248.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1224bp|location=Sequence derived from alignment at H-elongata_contig19031:4997..7099- (Himanthalia elongata Himel1 dioecious)back to top |