mRNA_H-elongata_contig19030.5247.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19030.5247.1
Unique NamemRNA_H-elongata_contig19030.5247.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A6A7G8R5_9CRUS (2-methylene-furan-3-one reductase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8R5_9CRUS)

HSP 1 Score: 265 bits (678), Expect = 2.230e-84
Identity = 135/285 (47.37%), Postives = 193/285 (67.72%), Query Frame = 1
Query:    7 WPYC-----SGVVEEVNVADPGQFKVGDEVIGTWA-AFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKKARN--VLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQL--RSSFGKSPRYEVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVV 831
            WPY      +GVV E++  D  +FKVGD V+ +W+ +FG+GGMAEYA+V T  A L+P  +  ++G+AL NS+ HA+     A +K  +RVLV+GGSGG+ +TLVQL K AGASF+A+ STD+ +L++ GVD V++Y E+N+WEVP+F  +PFDVI DCA G +AW++A+   +LK   +GGRFIA V+NEW +       +   L P   R +  R     +P+Y++ +G +N + +  + K+V+E +F   +DPASPFPFT  GV  AF+LL  RGGHGKIVV
Sbjct:   56 WPYIPGLDVAGVVSEID--DGSEFKVGDNVVASWSDSFGIGGMAEYALVKTSNAALRPDSIGIIDGSALANSAAHALSTFQNAAVKEGDRVLVLGGSGGLATTLVQLIKKAGASFIASTSTDKVLLESFGVDLVIDYHEQNWWEVPEFKGKPFDVIVDCADGKSAWRRAKKNGMLKTGWNGGRFIAVVWNEWHIEMHSYCSMFPFLCPALWRSIWTRLCSPFAPKYKIQVGSVNGEALANVLKMVDEGRFVAVLDPASPFPFTADGVKAAFHLLANRGGHGKIVV 338          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A061QZS4_9CHLO (Oxidoreductase zinc-binding protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZS4_9CHLO)

HSP 1 Score: 248 bits (632), Expect = 2.000e-77
Identity = 130/277 (46.93%), Postives = 172/277 (62.09%), Query Frame = 1
Query:   16 CSGVVEEVNVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWK--KARNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRSSFGKS-PRYEVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVVAM 837
            C  V+E+ +     + +VGD VI TW  FG GG+AE+A+V + L++ KP  +SA+E AA  N+  +A L +  AQLK  +RVL++GGSGG+G+ L+QLAK+ GASFVA  +TD  +  +LG DRV+NY++ N+WE  +F   PFDV+FD A G+ AW   K+  VLKP   GGRFIA V NEW +      QL   L  P  R   S F K  PRY VHL   +   +E    LV E K K+ +D  SP PFT  GV +AF L   R GHGKIVV++
Sbjct:   72 CGEVLEKGDGLSDTEVQVGDNVISTWTMFGQGGLAEFALVDSALSIRKPDSLSALEAAAFANTCPYAYLAVKGAQLKEGDRVLILGGSGGMGTLLIQLAKNFGASFVACTTTDTALGMSLGADRVINYRQTNWWEEKEFIENPFDVVFDAAEGLTAWHNIKSSKVLKPASKGGRFIAIVLNEWHIEIRSFGQLVSFLFRPLWRSFASKFNKKQPRYHVHLDSPDKTSMEESLALVLEGKLKIVVDKRSPHPFTTEGVREAFQLHMDRSGHGKIVVSL 348          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A2V3IJN8_9FLOR (2-methylene-furan-3-one reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN8_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 1.440e-72
Identity = 129/288 (44.79%), Postives = 177/288 (61.46%), Query Frame = 1
Query:    7 WPYC-----SGVVEEV--NVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKKA--RNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRSSF--GKSPRYEVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVVAM 837
            WPY      SGVVE+V  NV    +FK GD VIGTW AFG+G +AE A+V  K   LKP  +S +E AA+ +S+ +A+L ++ A++K  +RVLV+GGSGGVG++L+QL + A  S +   STD+P+ K LG D V+NYKE ++W+ P+   Q FDV+ DCA G +AW+KA    ++K R +GGRF+A V NEW +     WQ+    LP   R + S      SP Y +           R+  +VEE   KV +DP SP  FT  GV DAF+ +  R GHGKIVV++
Sbjct:   65 WPYIPGGDLSGVVEQVAPNVT---RFKPGDHVIGTWDAFGIGALAELAVVHQKFVELKPPKLSFLEAAAVADSAANALLAVEDARVKAGDRVLVLGGSGGVGTSLLQLLRRADVSHIVTTSTDKPLCKQLGADVVINYKEVDWWKAPEVTEQAFDVMIDCAEGSSAWRKALEHGIVKSRKEGGRFLAVVVNEWHIEIHNCWQMLSWFLPVVRRVIASRCLGSVSPTYTMMFPAPRGDSNRRLLDIVEEGGLKVVLDPESPHSFTTKGVHDAFDKMIARKGHGKIVVSI 349          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A7S3XBJ1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3XBJ1_9SPIT)

HSP 1 Score: 229 bits (585), Expect = 2.110e-70
Identity = 124/290 (42.76%), Postives = 179/290 (61.72%), Query Frame = 1
Query:    7 WPYCSGV-----VEEVNVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKK--ARNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRSSFGKS-------PRYEVHLG-EINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVV 831
            +PY  G      VEEV       FKVGD V+G+W+ FG GG+AEY  + +K+A  KP G+S ++ AA+ NS VHA   +++A +K  +RVLV+GGSGG+G+ LVQL +SAGAS+VA  STD  ++ +LGVD+ V++ +E + E+ ++   PFD+I DCA GV AW+   A  +LKP  +GGR++  V  EW ++  + + +     P   R L++  G++       P Y +HLG   ++  I R   LV + K K  +D  SP PFT  GV +AF LLR R GHGKIV+
Sbjct:   50 FPYTPGGDVCARVEEVAADAEEDFKVGDLVVGSWSLFGEGGLAEYYKLDSKMATKKPDGMSVLDAAAMANSLVHAQQTVEQAAVKTGDRVLVLGGSGGMGTLLVQLVRSAGASYVATTSTDVDLMASLGVDKCVDHTKEQWSELAEWKASPFDLIIDCAEGVGAWRACCANGLLKPASEGGRWLCVVLTEWDIYITKWYHIFTFFAPVLGRMLKNKLGRTFSGGRSAPTYMMHLGGPESSAAIARALDLVSQGKVKPVVDKRSPHPFTTEGVQEAFELLRNRQGHGKIVI 339          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A7S1XFV9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFV9_9RHOD)

HSP 1 Score: 226 bits (575), Expect = 1.270e-68
Identity = 123/282 (43.62%), Postives = 182/282 (64.54%), Query Frame = 1
Query:   19 SGVVEEVNVADPGQ------FKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKK--ARNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRSSFGKS-PRY--EVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVV 831
            +GVV E++ A+  +      F+VGDEV+GTW  FGVGGMA+YA+V  +L+ LKP  +S VE A+L NS+V++M+ ++ AQ++   RV+++GGSGG+G+ LVQLA+ AGA+++A  ST   ++K+LGVD  ++Y +E +W+ P+FA+ PFDV+FDCA G++AW    A  VLK    GG+  A V  EW +     + +   +LP   R + +    S PRY   + LGE N + I+R+  +V+E   K  +D  SP PFT  GV +AF +     GHGKIVV
Sbjct:   82 AGVVVEIDPAEDEKPESERKFRVGDEVVGTWKLFGVGGMAQYALVKMELSALKPQILSFVEAASLCNSAVYSMVGVEGAQVEKGSRVMILGGSGGLGTALVQLARRAGATYIACTSTQVDLMKSLGVDCAIDYTKEAWWKRPEFAQNPFDVVFDCAEGLSAWNNILASGVLKSGKLGGKHYAYVQKEWRIVMHHWYDMIIYMLPLLGRIIMTRIDTSKPRYVFPIILGEPNGQRIKRLFDIVQEGGLKAVLDSRSPHPFTEEGVREAFTIHENHRGHGKIVV 363          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A0G4HHL5_9ALVE (PKS_ER domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HHL5_9ALVE)

HSP 1 Score: 219 bits (557), Expect = 7.500e-66
Identity = 121/274 (44.16%), Postives = 168/274 (61.31%), Query Frame = 1
Query:   22 GVVEEVNVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDF-ARQPFDVIFDCAVGVAAWKKARNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRSSFGK--SPRYEVHLG-EINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVV 831
            G+VE V  A+   FK GD V+ TW AFG+GG  E AIV  K    KP  +  VE  AL NS+ +A+   +   +K   +VLV+G SGGVGS++VQLAK AGA+FVAA S+D  ++  LG D VVN++EEN+WE     +  PFD +FDCA G   W++A+ ++K    GG+F+A V NEW +  +    L  IL PP  R + SS     SP+Y + +G ++N + + R+ +LV+E + +  + P SPF FT  GV  AF LL  R  HGKIV+
Sbjct:   95 GIVEAV--AEGSAFKEGDCVVSTWDAFGMGGTGELAIVDEKYTARKPENLDIVEAVALANSASYALAGFELGCVKKGAKVLVLGASGGVGSSIVQLAKDAGAAFVAATSSDTQIVSGLGADLVVNHREENWWENQQMKSAGPFDAVFDCAEGAVGWQRAKKMMKSGCKGGKFVAFVLNEWDIQIKSALGLFTILGPPLGRHIGSSLCSCCSPKYHLVIGPDVNGESMSRVFELVKEGRLRPVVCPESPFDFTKEGVTAAFRLLESRRAHGKIVI 366          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A6H5K1Q1_9PHAE (PKS_ER domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Q1_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.470e-56
Identity = 117/275 (42.55%), Postives = 160/275 (58.18%), Query Frame = 1
Query:   22 GVVEEVNVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKKA--RNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRSSFGK-SPRYEVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVVAM 837
            GVVEEV   +   FKVGD V+ T      GG+AEYA+V T  A   P  V+ V+ A L NS +  +     A+LK  +RV+V+GGSGGVGS L+QL K A ASF+A  ST E +  +LG D VVNY+E N++E   +  +PFDV+ DC      WK+A  R VLK   +GGR+I+ V +        +WQ+  + +P   R   +   +  PRY++ + E  A+ I  M +LV   +FK  +DPASPFPFT  GV  AF L   +  HGK+VV +
Sbjct:   75 GVVEEV-AENSEAFKVGDRVVATNGMTPTGGLAEYAVVQTNNAAKAPANVTPVQAAVLPNSPIAGLHAAKAAKLKEGDRVMVLGGSGGVGSALLQLVKDAKASFLATTSTAEALCLSLGADVVVNYRETNWYEDERYKAEPFDVVIDCVGWRDEWKEAYRRGVLKSGWNGGRYIS-VASTDDPQIHSVWQVTKMFVPQLWRSGWTLINRLRPRYKLVISEPTAQDIADMVELVTTGRFKPVLDPASPFPFTADGVKAAFKLQGSKHAHGKVVVTI 347          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A8J5XNX8_DIALT (PKS_ER domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNX8_DIALT)

HSP 1 Score: 187 bits (476), Expect = 6.430e-54
Identity = 117/282 (41.49%), Postives = 159/282 (56.38%), Query Frame = 1
Query:   22 GVVEEVNVADPGQFKVGDEVIGTW--AAFG---VGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWK--KARNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGILLPPFSRQLRS-----SFGKSPRYEVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVV 831
            GVVE+V    P  FKVGD VI  +  +A G    GG+AEYA+V  K + LKP  +S +EGAAL +S + A      A+++  +RVLV+GG+GGVGS++VQLA+  GASFVAA ST   ++ +LG   V +Y  E +W +P +   PFD++FDC  G+A W    A   +K    GGR+I  V +E   H   + Q  G L P   R + S     +    PRY  HLG      +        + +FKV +D ASP PFT  GV  AF+L R +  HGK+VV
Sbjct:   75 GVVEDVEPGAP--FKVGDVVISMFGPSAAGPGPAGGLAEYAVVGVKRSTLKPPSLSPLEGAALASSGLTAFTAA--AKIRPSDRVLVLGGAGGVGSSIVQLARRRGASFVAATSTQRELVASLGAHVVHDYTREEWWTLPAYKAAPFDIVFDCVGGLAGWPTCSASGAVKSASQGGRWITIVPDEPNFHIHSVGQALGHLRPILGRAIASRAWPPTTRVRPRYTYHLGIDPVHLLGATADAAAKGEFKVVLDSASPLPFTADGVLKAFHLQRSKHAHGKLVV 352          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A7S1TLM6_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLM6_9RHOD)

HSP 1 Score: 170 bits (431), Expect = 1.340e-47
Identity = 113/291 (38.83%), Postives = 158/291 (54.30%), Query Frame = 1
Query:   19 SGVVEEVNVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKKARN-------VLKPRGDGGRFIAGVFNEWTMHCERLW--------QLPGILLPPFSRQLRSSFGKS-PRYE--VHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVVAM 837
            SGVV  V   +P + ++GD V+  +     GG+AEY +V T L  +KP GV     AA+ +S V A+++     L   +RVL++GGSGGVGS LVQLA+  GASFVAA S+D  +++ LG D  V+Y+E N WE+  + R+PFDV+ D   G   W  AR        +LK   DGGRF       WT+  +  W         +   L P   R++ + F +S PRY+  + L E +    E +  L+E     V +DPA PFPFT  GV  AF+L   R   GK VV++
Sbjct:   45 SGVVAAVADGEP-RLRMGDAVVARFNGSPRGGLAEYTVVKTALTTIKPNGVDFCHAAAIASSGVAALVLAK--MLNHGDRVLILGGSGGVGSDLVQLARRFGASFVAATSSDVQLVRRLGADDAVDYREHNVWELERYKREPFDVVIDLVGG--GWHSARRCSASSPGILKCGRDGGRF-------WTLTPDTAWFEMHSIADAIRVFLAPALWRRVYTFFNRSIPRYQFVLALPEGHESRAELLA-LIESRALDVTLDPAGPFPFTTAGVRAAFDLQASRHARGKAVVSL 322          
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Match: A0A7S2GWZ4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GWZ4_9STRA)

HSP 1 Score: 169 bits (429), Expect = 8.080e-47
Identity = 110/283 (38.87%), Postives = 154/283 (54.42%), Query Frame = 1
Query:   22 GVVEEVN--VADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLAMLKPVGVSAVEGAALVNS--SVHAMLMLDRAQLKGDERVLVIGGSGGVGSTLVQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFDVIFDCAVGVAAWKKARNVLKPRGDGGRFIAGVFNE-------WTMHCERLWQLPGILLPPFSRQLRSSFGKSPRYEVHLGEINAKGIERMCKLVEENKFKVAIDPASPFPFTVHGVADAFNLLRGRGGHGKIVVAM 837
            GVVE V   V D   FKVGD V        VGGMAEY +V   LA+ KP  V  ++ AA  ++  S+H++       +K  +RVLV+GGSGGVGS+ ++LAK+AGASF+A  ST   M  +LG D V+NY EEN+WE   F   PFD++ D   G   + KA +VLK    GG FIA   ++       W      L ++PG   P ++R  R+ +   PR+   +      G+ ++  L+E+   ++ +D +SP PFT  GV  AF        HGK+VV M
Sbjct:   96 GVVEAVTDKVKD---FKVGDIVAANNGFMPVGGMAEYMLVDASLAVFKPPSVDIIQAAACSSAVTSLHSV-----KNVKKGDRVLVLGGSGGVGSSAIRLAKNAGASFIATTSTQHAMCSSLGADEVINYNEENWWERDTFRNNPFDIVIDTVGGGNFYGKAVHVLKSNKRGGHFIAVTGDDPKPDLTTWFKAIRFLIKIPG--RPLWTRIRRAKY---PRFTTLMPYDETNGLAQVLALIEKGDLEIILDESSPLPFTEEGVKTAFKTQGYGHAHGKVVVKM 365          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19030.5247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7G8R5_9CRUS2.230e-8447.372-methylene-furan-3-one reductase (Fragment) n=1 T... [more]
A0A061QZS4_9CHLO2.000e-7746.93Oxidoreductase zinc-binding protein n=1 Tax=Tetras... [more]
A0A2V3IJN8_9FLOR1.440e-7244.792-methylene-furan-3-one reductase n=1 Tax=Gracilar... [more]
A0A7S3XBJ1_9SPIT2.110e-7042.76Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S1XFV9_9RHOD1.270e-6843.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A0G4HHL5_9ALVE7.500e-6644.16PKS_ER domain-containing protein n=1 Tax=Chromera ... [more]
A0A6H5K1Q1_9PHAE1.470e-5642.55PKS_ER domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A8J5XNX8_DIALT6.430e-5441.49PKS_ER domain-containing protein n=2 Tax=Diacronem... [more]
A0A7S1TLM6_9RHOD1.340e-4738.83Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S2GWZ4_9STRA8.080e-4738.87Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19030contigH-elongata_contig19030:1416..2255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue5.6e-30
Seed eggNOG ortholog65071.PYU1_T009594
EggNOG free text desc.Source PGD
EggNOG OGs1MG40@121069,COG0604@1,KOG1198@2759
COG Functional cat.C
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size840
Cds size840
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930087.9554834-CDS-H-elongata_contig19030:1415..22551622930087.9554834-CDS-H-elongata_contig19030:1415..2255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19030 1416..2255 -
1691679275.8888032-CDS-H-elongata_contig19030:1415..22551691679275.8888032-CDS-H-elongata_contig19030:1415..2255Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19030 1416..2255 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19030.5247.1prot_H-elongata_contig19030.5247.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19030 1416..2255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19030.5247.1

>prot_H-elongata_contig19030.5247.1 ID=prot_H-elongata_contig19030.5247.1|Name=mRNA_H-elongata_contig19030.5247.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MLWPYCSGVVEEVNVADPGQFKVGDEVIGTWAAFGVGGMAEYAIVSTKLA
MLKPVGVSAVEGAALVNSSVHAMLMLDRAQLKGDERVLVIGGSGGVGSTL
VQLAKSAGASFVAAVSTDEPMLKTLGVDRVVNYKEENFWEVPDFARQPFD
VIFDCAVGVAAWKKARNVLKPRGDGGRFIAGVFNEWTMHCERLWQLPGIL
LPPFSRQLRSSFGKSPRYEVHLGEINAKGIERMCKLVEENKFKVAIDPAS
PFPFTVHGVADAFNLLRGRGGHGKIVVAM*
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mRNA from alignment at H-elongata_contig19030:1416..2255-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19030.5247.1 ID=mRNA_H-elongata_contig19030.5247.1|Name=mRNA_H-elongata_contig19030.5247.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=840bp|location=Sequence derived from alignment at H-elongata_contig19030:1416..2255- (Himanthalia elongata Himel1 dioecious)
ATGCTTTGGCCTTACTGCAGCGGTGTCGTGGAAGAAGTAAACGTGGCAGA CCCCGGTCAGTTCAAGGTGGGCGATGAAGTAATCGGGACGTGGGCGGCTT TCGGCGTAGGAGGCATGGCGGAGTACGCGATCGTGTCGACAAAGCTCGCT ATGCTTAAGCCGGTTGGCGTAAGCGCAGTTGAGGGCGCCGCACTGGTGAA CAGTAGCGTGCACGCGATGCTAATGCTTGATCGAGCCCAGCTTAAGGGAG ATGAGCGCGTCTTGGTCATCGGTGGAAGCGGTGGTGTCGGCTCGACGCTC GTTCAGCTAGCGAAAAGTGCCGGAGCATCCTTTGTCGCCGCTGTTTCGAC CGACGAGCCGATGCTCAAGACCCTCGGTGTTGACCGAGTCGTGAATTACA AAGAAGAAAACTTTTGGGAGGTTCCGGATTTTGCGAGGCAACCGTTCGAC GTAATCTTCGACTGCGCCGTCGGCGTTGCTGCATGGAAGAAGGCGAGGAA TGTATTGAAACCCCGTGGTGATGGTGGGCGGTTTATAGCCGGGGTCTTTA ATGAATGGACCATGCATTGCGAGAGATTGTGGCAGTTGCCTGGCATCCTG CTTCCCCCGTTCTCTAGGCAACTGCGGTCGTCCTTCGGGAAGTCACCGAG GTACGAGGTACACCTCGGCGAGATCAACGCCAAGGGGATCGAAAGAATGT GCAAGCTCGTTGAAGAAAATAAGTTCAAGGTAGCGATTGACCCTGCATCG CCTTTCCCCTTCACGGTTCATGGTGTTGCGGATGCATTTAACTTGTTACG GGGGCGAGGTGGTCATGGAAAGATTGTCGTAGCGATGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig19030:1416..2255-

>mRNA_H-elongata_contig19030.5247.1 ID=mRNA_H-elongata_contig19030.5247.1|Name=mRNA_H-elongata_contig19030.5247.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1680bp|location=Sequence derived from alignment at H-elongata_contig19030:1416..2255- (Himanthalia elongata Himel1 dioecious)
ATGCTTTGGCCTTACTGCAGCGGTGTCGTGGAAGAAGTAAACGTGGCAGA
CCCCGGTCAGTTCAAGGTGGGCGATGAAGTAATCGGGACGTGGGCGGCTT
TCGGCGTAGGAGGCATGGCGGAGTACGCGATCGTGTCGACAAAGCTCGCT
ATGCTTAAGCCGGTTGGCGTAAGCGCAGTTGAGGGCGCCGCACTGGTGAA
CAGTAGCGTGCACGCGATGCTAATGCTTGATCGAGCCCAGCTTAAGGGAG
ATGAGCGCGTCTTGGTCATCGGTGGAAGCGGTGGTGTCGGCTCGACGCTC
GTTCAGCTAGCGAAAAGTGCCGGAGCATCCTTTGTCGCCGCTGTTTCGAC
CGACGAGCCGATGCTCAAGACCCTCGGTGTTGACCGAGTCGTGAATTACA
AAGAAGAAAACTTTTGGGAGGTTCCGGATTTTGCGAGGCAACCGTTCGAC
GTAATCTTCGACTGCGCCGTCGGCGTTGCTGCATGGAAGAAGGCGAGGAA
TGTATTGAAACCCCGTGGTGATGGTGGGCGGTTTATAGCCGGGGTCTTTA
ATGAATGGACCATGCATTGCGAGAGATTGTGGCAGTTGCCTGGCATCCTG
CTTCCCCCGTTCTCTAGGCAACTGCGGTCGTCCTTCGGGAAGTCACCGAG
GTACGAGGTACACCTCGGCGAGATCAACGCCAAGGGGATCGAAAGAATGT
GCAAGCTCGTTGAAGAAAATAAGTTCAAGGTAGCGATTGACCCTGCATCG
CCTTTCCCCTTCACGGTTCATGGTGTTGCGGATGCATTTAACTTGTTACG
GGGGCGAGGTGGTCATGGAAAGATTGTCGTAGCGATGTAGATGCTTTGGC
CTTACTGCAGCGGTGTCGTGGAAGAAGTAAACGTGGCAGACCCCGGTCAG
TTCAAGGTGGGCGATGAAGTAATCGGGACGTGGGCGGCTTTCGGCGTAGG
AGGCATGGCGGAGTACGCGATCGTGTCGACAAAGCTCGCTATGCTTAAGC
CGGTTGGCGTAAGCGCAGTTGAGGGCGCCGCACTGGTGAACAGTAGCGTG
CACGCGATGCTAATGCTTGATCGAGCCCAGCTTAAGGGAGATGAGCGCGT
CTTGGTCATCGGTGGAAGCGGTGGTGTCGGCTCGACGCTCGTTCAGCTAG
CGAAAAGTGCCGGAGCATCCTTTGTCGCCGCTGTTTCGACCGACGAGCCG
ATGCTCAAGACCCTCGGTGTTGACCGAGTCGTGAATTACAAAGAAGAAAA
CTTTTGGGAGGTTCCGGATTTTGCGAGGCAACCGTTCGACGTAATCTTCG
ACTGCGCCGTCGGCGTTGCTGCATGGAAGAAGGCGAGGAATGTATTGAAA
CCCCGTGGTGATGGTGGGCGGTTTATAGCCGGGGTCTTTAATGAATGGAC
CATGCATTGCGAGAGATTGTGGCAGTTGCCTGGCATCCTGCTTCCCCCGT
TCTCTAGGCAACTGCGGTCGTCCTTCGGGAAGTCACCGAGGTACGAGGTA
CACCTCGGCGAGATCAACGCCAAGGGGATCGAAAGAATGTGCAAGCTCGT
TGAAGAAAATAAGTTCAAGGTAGCGATTGACCCTGCATCGCCTTTCCCCT
TCACGGTTCATGGTGTTGCGGATGCATTTAACTTGTTACGGGGGCGAGGT
GGTCATGGAAAGATTGTCGTAGCGATGTAG
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