prot_H-elongata_contig19019.5244.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19019.5244.1
Unique Nameprot_H-elongata_contig19019.5244.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length264
Homology
BLAST of mRNA_H-elongata_contig19019.5244.1 vs. uniprot
Match: D8LJV2_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV2_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 5.570e-118
Identity = 180/282 (63.83%), Postives = 212/282 (75.18%), Query Frame = 0
Query:    1 MLQTCLNNAERKEWYSLGKISNEFLPKLLWLSTNVWLLSRRLLREGERGKRVQELLFDELWRETRRQMRSIQVDEMMLKKYLGEAQQHTFMTLVQYDHAYTLENRDERMEILTGALWRGVYMSNHKIKESHVRVMAEYIDRELADVYDVDAEDFFAVCIEFGLPPPKFGASKQIRGAEKSHDK----------------PRSPAAGSSSVSLGRGSPV-ERIEHGDFG--EAGNGRWRASLAESGKVYYWHTSSRETTWEKPSDSDAFVPTVMPKDKDTTEA 263
            MLQTCLNNAE  EWYS GKISNEFLPKLLWLSTNVWL+SRRLLREGERGK+VQELLFDELWRET+RQMRSI+V EMMLKKYL EAQQHTF+TLVQ+DHAYTLE+R+ERM++LT ALWRGVYMS+  IKE HVRV+AEY+D ELAD+Y VDA +FFAVCIEF  PP     + +++ A                      P      + S + GRG  + E++ HGDFG  +   GRWRA LAESGKVYYWHT SRE TW++P+ ++A+VP+VMPK   T  A
Sbjct:  132 MLQTCLNNAECTEWYSDGKISNEFLPKLLWLSTNVWLMSRRLLREGERGKKVQELLFDELWRETKRQMRSIEVSEMMLKKYLAEAQQHTFITLVQFDHAYTLESREERMDVLTSALWRGVYMSDESIKEPHVRVLAEYVDAELADIYAVDASEFFAVCIEFAPPP-----TAELKAAXXXXXXXXXXXXXXXXGTVAAAPGLEGGAADSTAAGRGGGIGEKVHHGDFGSGDGREGRWRACLAESGKVYYWHTVSREVTWDRPAGAEAYVPSVMPKADQTLTA 408          
BLAST of mRNA_H-elongata_contig19019.5244.1 vs. uniprot
Match: F0WM81_9STRA (Uncharacterized protein AlNc14C153G7585 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM81_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.990e-20
Identity = 72/243 (29.63%), Postives = 110/243 (45.27%), Query Frame = 0
Query:    1 MLQTCLNNAERKEWYSLGKISNEFLPKLLWLSTNVWLLSRRLLREGERGKRVQELLFDELWRETRRQMRSIQVDEMMLKKYLGEAQQHTFMTLVQYDHAYTLENRDERMEILTGALWRGVYMSNHKIKESHVRVMAEYIDRELADVYDVDAEDFFAVCIEFGLPPPKFGASKQIRGAEKSHDKPRSPAAGSSSVSLGRGSPVERIEHGDFGEAGNGRWRASLAESGKVYYWHTSSRETTWEKP 243
            +LQ+C+N +   E Y   ++  +F  +   L  +VWL+ RRL +EG+ G+ +QEL+FD LW ET  ++R  QV E+ + KYL + QQ  F   V YD        D    I    L +     +H   E HVR   EYI + +  +  +D +      I +   P K    KQI                   V +G+           FG     +WR +L   G++YYW++ SR + W+ P
Sbjct:   70 VLQSCVNQSAVPELYQAIRLRPDFRGQQALLMVHVWLIHRRLAKEGDAGRVLQELVFDRLWEETVLRIRHQQVSELTVNKYLKQVQQVCFNACVAYDKGLERSKTDFNTAIRCHLLAQD---DSHSPDEDHVRATYEYIQQNMQMLEKLDEKYLMKGVIPWAQAP-KVSDLKQI-----------------DIVLIGQ----------KFG-----KWRTALDIRGQMYYWNSESRLSAWKLP 276          
BLAST of mRNA_H-elongata_contig19019.5244.1 vs. uniprot
Match: A0A484DVK9_BRELC (WW domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVK9_BRELC)

HSP 1 Score: 93.6 bits (231), Expect = 2.930e-19
Identity = 68/250 (27.20%), Postives = 118/250 (47.20%), Query Frame = 0
Query:    1 MLQTCLNNAERKEWYSLGKISNEFLPKLLWLSTNVWLLSRRLLREGERGKRVQELLFDELWRETRRQMRSIQVDEMMLKKYLGEAQQHTFMTLVQYDHAYTLENRDERMEILTGALWRGVYMSNHKIKESHVR------VMAEYIDRELADVYDVDAEDFFAVCIEFGLPPPKFGASKQIRGAEKSHDKPRSPAAGSSSVSLGRGSPVERIEHGDFGEAGNGRWRASLAESGKVYYWHTSSRETTWEKPS 244
            + Q+C+N+  + ++Y    +   F  +   L  +VWL+ RRL  EGE+GK +QEL+FD LW ET  ++R + + E+ + KYL + QQ  F   + YD             +  G  +    ++ H ++           +MAE++ REL ++  VDA+      I +  P P+            +H K R P      V +G     +R           G WR++L   GK+Y+W+ ++R + W++P+
Sbjct:   18 VFQSCMNHTAQPDYYRALGLPQSFRAQQAILMAHVWLVHRRLALEGEKGKIMQELVFDRLWEETVVRIRYLNISELTVNKYLAQVQQICFNACIAYDKG-----------LKEGPRYFQTAVAQHLLENESTEGLRIASIMAEHMKRELKNLEKVDAKYIMLGTIPW-TPLPE------------THAKIR-PTDVDDVVLIG-----QRF----------GNWRSALDNRGKLYFWNITTRYSIWDRPT 227          
BLAST of mRNA_H-elongata_contig19019.5244.1 vs. uniprot
Match: A0A024GN83_9STRA (WW domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN83_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.060e-14
Identity = 66/244 (27.05%), Postives = 106/244 (43.44%), Query Frame = 0
Query:    1 MLQTCLNNAERKEWYSLGKISNEFLPKLLWLSTNVWLLSRRLLREGERGKRVQELLFDELWRETRRQMRSIQVDEMMLKKYLGEAQQHTFMTLVQYDHAYTLENRDERMEILTGALWRGVYMSNHKIKESHVRVMAEYIDRELADVYDVDAEDFFAVCIEFGLPPPKFGASKQIRGAEKSHDKPRSPAAGSSSVSLGRGSPVERIEHGDFGEAGNGRWRASLAESGKVYYWHTSSRETTWEKPS 244
            +LQ+C+N +     Y   ++  +F  +   L  +VWL+ RRL ++GE G+ +QE +FD LW ET  ++R  +V E+ + KYL + QQ  F   + YD        D    I    L        H   E +V++ + Y+ + +  +  +D        I +   P   G  KQ+                   V +G+           FG      WR +L   GK+YYWH+ SR + WE P+
Sbjct:   91 LLQSCVNQSAVPNLYHAIRLRPDFRGQQALLMAHVWLVHRRLGKQGEAGRVLQEGVFDRLWEETVSRIRHQKVSELTVNKYLKQVQQVCFNACIAYDTGLERSKDDFNTAIRCHLLAED---DLHVPDEQYVQMTSTYLWQNMKMLDKLDERYLMKGVIPWDHVPDIAGF-KQL-----------------DVVLIGQ----------KFGN-----WRTALDNCGKMYYWHSESRLSAWELPA 298          
BLAST of mRNA_H-elongata_contig19019.5244.1 vs. uniprot
Match: A0A6A0H5R2_HYAAZ (Ubiq_cyt_C_chap domain-containing protein n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H5R2_HYAAZ)

HSP 1 Score: 54.7 bits (130), Expect = 2.400e-5
Identity = 38/138 (27.54%), Postives = 65/138 (47.10%), Query Frame = 0
Query:   14 WYSLGKISNEFLPKLLWLSTNVWLLSRRLLREGERGKRVQELLFDELWRETRRQMRSIQVDEMMLKKYLGEAQQHTFMTLVQYDHAYTLENRDERMEILTGALWRGVYMSNHKIKESHVRVMAEYIDRELADVYDVDA 151
            ++ +  + +      L +   VWL+S RL+ EGE GK  +  L   LW +T  +++ + V     +  L +   H   +LV YD      +RD     L GA+WR   +++ +  ES V  + + +  +L D  D DA
Sbjct:   67 FFKVLSLQDTLFSWFLVMELQVWLVSVRLMAEGEDGKTARNALISALWDDTNAKIKDLGVRSTSKRADLEDMNSHLQTSLVSYDEGLLGSDRD-----LAGAVWRR--LADPRCLESLVSYIRQQV--QLLDALDTDA 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19019.5244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJV2_ECTSI5.570e-11863.83WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
F0WM81_9STRA1.990e-2029.63Uncharacterized protein AlNc14C153G7585 n=1 Tax=Al... [more]
A0A484DVK9_BRELC2.930e-1927.20WW domain-containing protein n=1 Tax=Bremia lactuc... [more]
A0A024GN83_9STRA1.060e-1427.05WW domain-containing protein n=1 Tax=Albugo candid... [more]
A0A6A0H5R2_HYAAZ2.400e-527.54Ubiq_cyt_C_chap domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 213..245
e-value: 1.7E-4
score: 30.9
IPR001202WW domainPFAMPF00397WWcoord: 218..243
e-value: 5.5E-8
score: 32.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 218..243
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 218..245
score: 11.979
IPR021150Ubiquinol-cytochrome c chaperone/UPF0174PFAMPF03981Ubiq_cyt_C_chapcoord: 28..156
e-value: 4.0E-16
score: 59.4
NoneNo IPR availableGENE3D2.20.70.10coord: 180..248
e-value: 6.0E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR12184:SF1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 1coord: 1..169
IPR007129Ubiquinol-cytochrome c chaperone, CBP3PANTHERPTHR12184BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG ZIC3-BINDING PROTEINcoord: 1..169
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 215..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19019contigH-elongata_contig19019:573..4194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19019.5244.1mRNA_H-elongata_contig19019.5244.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19019 448..5263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19019.5244.1 ID=prot_H-elongata_contig19019.5244.1|Name=mRNA_H-elongata_contig19019.5244.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=264bp
MLQTCLNNAERKEWYSLGKISNEFLPKLLWLSTNVWLLSRRLLREGERGK
RVQELLFDELWRETRRQMRSIQVDEMMLKKYLGEAQQHTFMTLVQYDHAY
TLENRDERMEILTGALWRGVYMSNHKIKESHVRVMAEYIDRELADVYDVD
AEDFFAVCIEFGLPPPKFGASKQIRGAEKSHDKPRSPAAGSSSVSLGRGS
PVERIEHGDFGEAGNGRWRASLAESGKVYYWHTSSRETTWEKPSDSDAFV
PTVMPKDKDTTEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR021150Ubiq_cyt_c_chap/UPF0174
IPR007129Ubiqinol_cyt_c_chaperone_CPB3
IPR036020WW_dom_sf