prot_H-elongata_contig1064.523.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1064.523.1
Unique Nameprot_H-elongata_contig1064.523.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.500e-36
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  110 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 253
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.000e-36
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  434 MGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 577
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.440e-36
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  110 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 253
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.770e-36
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  110 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 253
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.790e-36
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  110 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 253
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.770e-36
Identity = 68/144 (47.22%), Postives = 90/144 (62.50%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ G S+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  486 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 629
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.320e-35
Identity = 68/144 (47.22%), Postives = 90/144 (62.50%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ G S+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  110 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 253
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.400e-35
Identity = 68/144 (47.22%), Postives = 89/144 (61.81%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP  P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIE IRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  306 MGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 449
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.150e-34
Identity = 67/144 (46.53%), Postives = 89/144 (61.81%), Query Frame = 0 
Query:    1 MGPMTPAAKE---GYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            MGP+ P AK     + Y    T  +++MKE++LL+ K +  E  H YNM V    G RIETIRCDKGGE  G +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N S HS L
Sbjct:  451 MGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSAL 594
[Close]
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.130e-34
Identity = 66/144 (45.83%), Postives = 90/144 (62.50%), Query Frame = 0 
Query:    1 MGPMTPAAKEG---YKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVVPLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRGGLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSIL 141
            +GP+ P AK     + Y    T  ++++KE++LL+ K    E  H YN+ V    G RIETIRCDKGGE TG +F   C ++ I ++  AT +PQQ GVS+R G TLA +  CL+K+G+FP  +WG+   TA YL N SPHS L
Sbjct:  110 VGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSAL 253
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1064.523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCM0_9PHAE1.500e-3647.92Integrase catalytic domain-containing protein n=5 ... [more]
A0A6H5KVF6_9PHAE2.000e-3647.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K500_9PHAE2.440e-3647.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JJR8_9PHAE2.770e-3647.92Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KCT3_9PHAE2.790e-3647.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KT84_9PHAE6.770e-3647.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1R7_9PHAE2.320e-3547.22Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JSL6_9PHAE2.400e-3547.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J8P7_9PHAE1.150e-3446.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRJ1_9PHAE2.130e-3445.83Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..124
e-value: 2.6E-13
score: 51.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 8..99
e-value: 7.4E-9
score: 35.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..142
score: 10.414
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..125
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 2..125
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1064contigH-elongata_contig1064:9708..10133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1064.523.1mRNA_H-elongata_contig1064.523.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1064 9708..10157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1064.523.1 ID=prot_H-elongata_contig1064.523.1|Name=mRNA_H-elongata_contig1064.523.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
MGPMTPAAKEGYKYISMFTKTFSRMKEIFLLKGKVEAVELSHQYNMTVVV
PLGLRIETIRCDKGGEYTGMKFGTLCIDADINVKCNATTSPQQNGVSDRG
GLTLAQIKMCLMKEGNFPACLWGKPFFTATYLSNGSPHSILR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf