prot_H-elongata_contig189942.5232.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189942.5232.1
Unique Nameprot_H-elongata_contig189942.5232.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length38
Homology
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A836CC02_9STRA (Coatomer subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC02_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.550e-15
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            PQKHRVLVGFLATFLREEGGF+FKKAITDCIVEL+SAI
Sbjct:  414 PQKHRVLVGFLATFLREEGGFDFKKAITDCIVELMSAI 451          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A7R9YCZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCZ5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.790e-14
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            P KHRVLVGFLATFLREEGGFEFK+ ITDCIVEL+SAI
Sbjct:   95 PNKHRVLVGFLATFLREEGGFEFKRCITDCIVELMSAI 132          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.270e-14
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            P KHRVLVGFLATFLREEGGFEFKKAITDCIVEL++AI
Sbjct:  280 PLKHRVLVGFLATFLREEGGFEFKKAITDCIVELMTAI 317          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A7S1U574_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U574_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.080e-13
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            P KHRVLVGFLATFLREEGGFEFK+ ITDCIVEL++AI
Sbjct:  478 PNKHRVLVGFLATFLREEGGFEFKRCITDCIVELMTAI 515          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A7S2CIT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIT1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.150e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            PQKHRVLVGFLA  LREEGGFEFKKAITD IVEL+ AI
Sbjct:   21 PQKHRVLVGFLAATLREEGGFEFKKAITDSIVELMHAI 58          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.520e-12
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            PQKHRVL+GF+ATFLREEGGFEFKK I D IV+L+ AI
Sbjct:  418 PQKHRVLIGFMATFLREEGGFEFKKTIVDSIVDLMQAI 455          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A7S1C1K4_9STRA (Coatomer subunit gamma n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1K4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.580e-11
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISA 37
            P KHRVLVGFL+ FLREEGGFEFKKAITD IV L+ A
Sbjct:  422 PAKHRVLVGFLSNFLREEGGFEFKKAITDAIVHLMDA 458          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: A0A7S2S5Q9_9STRA (Coatomer subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5Q9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.580e-11
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            PQKHRVLVGFLA+ LREEGGF+FKK+ITD IV+LI  I
Sbjct:  417 PQKHRVLVGFLASTLREEGGFDFKKSITDAIVDLIHTI 454          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: D7FHC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC7_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.650e-10
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            P K RVLVGFLATF RE+GGFEFKKAITDC  EL++AI
Sbjct:  952 PLKRRVLVGFLATFPREQGGFEFKKAITDCTGELMTAI 989          
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Match: F0YM71_AURAN (Coatomer subunit gamma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YM71_AURAN)

HSP 1 Score: 62.4 bits (150), Expect = 2.650e-10
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI 38
            P KHRVLVGFLA FLREEGGF+FKKAI D IV L+ AI
Sbjct:  420 PLKHRVLVGFLANFLREEGGFDFKKAIVDAIVALMCAI 457          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189942.5232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC02_9STRA2.550e-1594.74Coatomer subunit gamma n=1 Tax=Tribonema minus Tax... [more]
A0A7R9YCZ5_9STRA1.790e-1489.47Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
D7FHC8_ECTSI2.270e-1492.11Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=28... [more]
A0A7S1U574_9STRA1.080e-1386.84Hypothetical protein (Fragment) n=3 Tax=Pinguiochr... [more]
A0A7S2CIT1_9STRA1.150e-1286.84Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6U1MSQ3_9STRA8.520e-1278.95Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica... [more]
A0A7S1C1K4_9STRA7.580e-1181.08Coatomer subunit gamma n=2 Tax=Corethron hystrix T... [more]
A0A7S2S5Q9_9STRA7.580e-1178.95Coatomer subunit gamma n=1 Tax=Rhizochromulina mar... [more]
D7FHC7_ECTSI2.650e-1078.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YM71_AURAN2.650e-1078.95Coatomer subunit gamma n=1 Tax=Aureococcus anophag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189942contigH-elongata_contig189942:250..363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189942.5232.1mRNA_H-elongata_contig189942.5232.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189942 250..363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189942.5232.1 ID=prot_H-elongata_contig189942.5232.1|Name=mRNA_H-elongata_contig189942.5232.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=38bp
PQKHRVLVGFLATFLREEGGFEFKKAITDCIVELISAI
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